RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 OTPQ5XKR4 325 aa13.62□□□□□ -0.23
LMX1B-204ENST00000561065 PGBD2Q6P3X8 592 aa13.62□□□□□ -0.23
LMX1B-204ENST00000561065 UGT2A3Q6UWM9 527 aa13.62□□□□□ -0.23
LMX1B-204ENST00000561065 THSD4Q6ZMP0 1018 aa13.62□□□□□ -0.23
LMX1B-204ENST00000561065 RASSF6Q6ZTQ3 369 aa13.62□□□□□ -0.23
LMX1B-204ENST00000561065 SPATA24Q86W54 205 aa13.62□□□□□ -0.23
LMX1B-204ENST00000561065 GJC3Q8NFK1 279 aa13.62□□□□□ -0.23
LMX1B-204ENST00000561065 OR1J1Q8NGS3 322 aa13.62□□□□□ -0.23
LMX1B-204ENST00000561065 CLDND2Q8NHS1 167 aa13.62□□□□□ -0.23
LMX1B-204ENST00000561065 SPATA3Q8NHX4 192 aa13.62□□□□□ -0.23
LMX1B-204ENST00000561065 RDH5Q92781 318 aa13.62□□□□□ -0.23
LMX1B-204ENST00000561065 HPS1Q92902 700 aa13.62□□□□□ -0.23
LMX1B-204ENST00000561065 RASD2Q96D21 266 aa13.62□□□□□ -0.23
LMX1B-204ENST00000561065 SAMD8Q96LT4 415 aa13.62□□□□□ -0.23
LMX1B-204ENST00000561065 ZNF416Q9BWM5 594 aa13.62□□□□□ -0.23
LMX1B-204ENST00000561065 TEX12Q9BXU0 123 aa13.62□□□□□ -0.23
LMX1B-204ENST00000561065 EMC7Q9NPA0 242 aa13.62□□□□□ -0.23
LMX1B-204ENST00000561065 POLR1DQ9Y2S0 133 aa13.62□□□□□ -0.23
LMX1B-204ENST00000561065 CDH10Q9Y6N8 788 aa13.62□□□□□ -0.23
LMX1B-204ENST00000561065 FBN3Q75N90 2809 aa13.61□□□□□ -0.23
LMX1B-204ENST00000561065 ACOT8O14734 319 aa13.61□□□□□ -0.23
LMX1B-204ENST00000561065 PPP1R3DO95685 299 aa13.61□□□□□ -0.23
LMX1B-204ENST00000561065 IFNGP01579 166 aa13.61□□□□□ -0.23
LMX1B-204ENST00000561065 SRD5A1P18405 259 aa13.61□□□□□ -0.23
LMX1B-204ENST00000561065 GPR6P46095 362 aaPredicted RBP13.61□□□□□ -0.23
LMX1B-204ENST00000561065 CCL8P80075 99 aa13.61□□□□□ -0.23
LMX1B-204ENST00000561065 FAM209AQ5JX71 171 aa13.61□□□□□ -0.23
LMX1B-204ENST00000561065 ZNF774Q6NX45 483 aa13.61□□□□□ -0.23
LMX1B-204ENST00000561065 LEG1Q6P5S2 330 aa13.61□□□□□ -0.23
LMX1B-204ENST00000561065 TMEM154Q6P9G4 183 aa13.61□□□□□ -0.23
LMX1B-204ENST00000561065 MARS2Q96GW9 593 aaKnown RBP13.61□□□□□ -0.23
LMX1B-204ENST00000561065 NUAK2Q9H093 628 aa13.61□□□□□ -0.23
LMX1B-204ENST00000561065 SRA1Q9HD15 236 aaKnown RBP13.61□□□□□ -0.23
LMX1B-204ENST00000561065 HINT3Q9NQE9 182 aaKnown RBP13.61□□□□□ -0.23
LMX1B-204ENST00000561065 IL20Q9NYY1 176 aa13.61□□□□□ -0.23
LMX1B-204ENST00000561065 COA3Q9Y2R0 106 aaPredicted RBP13.61□□□□□ -0.23
LMX1B-204ENST00000561065 FAM157AC9JC47 383 aa13.6□□□□□ -0.23
LMX1B-204ENST00000561065 H3BSA7 217 aa13.6□□□□□ -0.23
LMX1B-204ENST00000561065 SGCEO43556 437 aa13.6□□□□□ -0.23
LMX1B-204ENST00000561065 ICMTO60725 284 aa13.6□□□□□ -0.23
LMX1B-204ENST00000561065 E2F6O75461 281 aa13.6□□□□□ -0.23
LMX1B-204ENST00000561065 GASTP01350 101 aa13.6□□□□□ -0.23
LMX1B-204ENST00000561065 IGHV3-13P01766 116 aa13.6□□□□□ -0.23
LMX1B-204ENST00000561065 CTLA4P16410 223 aa13.6□□□□□ -0.23
LMX1B-204ENST00000561065 CDKN2AP42771 156 aaKnown RBP13.6□□□□□ -0.23
LMX1B-204ENST00000561065 BLVRAP53004 296 aa13.6□□□□□ -0.23
LMX1B-204ENST00000561065 MRPS11P82912 194 aaKnown RBP13.6□□□□□ -0.23
LMX1B-204ENST00000561065 BNIP1Q12981 228 aa13.6□□□□□ -0.23
LMX1B-204ENST00000561065 HNRNPA0Q13151 305 aaKnown RBP13.6□□□□□ -0.23
LMX1B-204ENST00000561065 KCNMB1Q16558 191 aa13.6□□□□□ -0.23
LMX1B-204ENST00000561065 PCGF3Q3KNV8 242 aa13.6□□□□□ -0.23
LMX1B-204ENST00000561065 KRTAP24-1Q3LI83 254 aa13.6□□□□□ -0.23
LMX1B-204ENST00000561065 ZNF620Q6ZNG0 422 aa13.6□□□□□ -0.23
LMX1B-204ENST00000561065 LINC01356Q8N9X3 169 aa13.6□□□□□ -0.23
LMX1B-204ENST00000561065 AQP11Q8NBQ7 271 aa13.6□□□□□ -0.23
LMX1B-204ENST00000561065 OR5L1Q8NGL2 311 aa13.6□□□□□ -0.23
LMX1B-204ENST00000561065 OR2AJ1Q8NGZ0 328 aa13.6□□□□□ -0.23
LMX1B-204ENST00000561065 OR2T4Q8NH00 348 aa13.6□□□□□ -0.23
LMX1B-204ENST00000561065 SLC25A40Q8TBP6 338 aa13.6□□□□□ -0.23
LMX1B-204ENST00000561065 GIPC3Q8TF64 312 aa13.6□□□□□ -0.23
LMX1B-204ENST00000561065 CLPTM1LQ96KA5 538 aa13.6□□□□□ -0.23
LMX1B-204ENST00000561065 DCLRE1CQ96SD1 692 aaKnown RBP13.6□□□□□ -0.23
LMX1B-204ENST00000561065 GPA33Q99795 319 aa13.6□□□□□ -0.23
LMX1B-204ENST00000561065 DGCR6LQ9BY27 220 aa13.6□□□□□ -0.23
LMX1B-204ENST00000561065 CYSLTR2Q9NS75 346 aa13.6□□□□□ -0.23
LMX1B-204ENST00000561065 PLEK2Q9NYT0 353 aa13.6□□□□□ -0.23
LMX1B-204ENST00000561065 CGGBP1Q9UFW8 167 aaPredicted RBP13.6□□□□□ -0.23
LMX1B-204ENST00000561065 B9D1Q9UPM9 204 aa13.6□□□□□ -0.23
LMX1B-204ENST00000561065 CACNG2Q9Y698 323 aa13.6□□□□□ -0.23
LMX1B-204ENST00000561065 U3KQV3 271 aa13.6□□□□□ -0.23
LMX1B-204ENST00000561065 PLSCR5A0PG75 271 aa13.59□□□□□ -0.23
LMX1B-204ENST00000561065 ZSCAN5BA6NJL1 495 aa13.59□□□□□ -0.23
LMX1B-204ENST00000561065 J3QW42 95 aa13.59□□□□□ -0.23
LMX1B-204ENST00000561065 GSC2O15499 205 aa13.59□□□□□ -0.23
LMX1B-204ENST00000561065 CDC14BO60729 498 aa13.59□□□□□ -0.23
LMX1B-204ENST00000561065 NGFP01138 241 aa13.59□□□□□ -0.23
LMX1B-204ENST00000561065 HLA-DQA2P01906 255 aa13.59□□□□□ -0.23
LMX1B-204ENST00000561065 HIST1H1CP16403 213 aaKnown RBP13.59□□□□□ -0.23
LMX1B-204ENST00000561065 ZNF823P16415 610 aa13.59□□□□□ -0.23
LMX1B-204ENST00000561065 MMP15P51511 669 aa13.59□□□□□ -0.23
LMX1B-204ENST00000561065 TEKQ02763 1124 aa13.59□□□□□ -0.23
LMX1B-204ENST00000561065 ECH1Q13011 328 aa13.59□□□□□ -0.23
LMX1B-204ENST00000561065 ZMAT1Q5H9K5 638 aa13.59□□□□□ -0.23
LMX1B-204ENST00000561065 OR2T33Q8NG76 320 aa13.59□□□□□ -0.23
LMX1B-204ENST00000561065 OR52E2Q8NGJ4 325 aa13.59□□□□□ -0.23
LMX1B-204ENST00000561065 OR4K13Q8NH42 304 aa13.59□□□□□ -0.23
LMX1B-204ENST00000561065 CANT1Q8WVQ1 401 aa13.59□□□□□ -0.23
LMX1B-204ENST00000561065 C4orf45Q96LM5 186 aa13.59□□□□□ -0.23
LMX1B-204ENST00000561065 NMNAT3Q96T66 252 aa13.59□□□□□ -0.23
LMX1B-204ENST00000561065 OR2J1Q9GZK6 312 aa13.59□□□□□ -0.23
LMX1B-204ENST00000561065 POFUT1Q9H488 388 aa13.59□□□□□ -0.23
LMX1B-204ENST00000561065 TBC1D23Q9NUY8 699 aa13.59□□□□□ -0.23
LMX1B-204ENST00000561065 TBCCD1Q9NVR7 557 aa13.59□□□□□ -0.23
LMX1B-204ENST00000561065 ATPIF1Q9UII2 106 aa13.59□□□□□ -0.23
LMX1B-204ENST00000561065 KCNG2Q9UJ96 466 aa13.59□□□□□ -0.23
LMX1B-204ENST00000561065 KLHL21Q9UJP4 597 aa13.59□□□□□ -0.23
LMX1B-204ENST00000561065 ARRDC5A6NEK1 342 aa13.58□□□□□ -0.24
LMX1B-204ENST00000561065 ABHD16AO95870 558 aa13.58□□□□□ -0.24
LMX1B-204ENST00000561065 HTR5AP47898 357 aa13.58□□□□□ -0.24
LMX1B-204ENST00000561065 RGS6P49758 472 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 160.8 ms