RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 MUC13Q9H3R2 512 aa2.97□□□□□ -1.93
HERC1-211ENST00000560983 POPDC3Q9HBV1 291 aa2.97□□□□□ -1.93
HERC1-211ENST00000560983 XAB2Q9HCS7 855 aaKnown RBP2.97□□□□□ -1.93
HERC1-211ENST00000560983 C20orf141Q9NUB4 165 aa2.97□□□□□ -1.93
HERC1-211ENST00000560983 GIMAP4Q9NUV9 329 aa2.97□□□□□ -1.93
HERC1-211ENST00000560983 SLC12A4Q9UP95 1085 aa2.97□□□□□ -1.93
HERC1-211ENST00000560983 SMAD5-AS1Q9Y6J3 95 aa2.97□□□□□ -1.93
HERC1-211ENST00000560983 TCRBV4S1A1TA0A5B7 111 aa2.96□□□□□ -1.94
HERC1-211ENST00000560983 TMEM72A0PK05 275 aa2.96□□□□□ -1.94
HERC1-211ENST00000560983 LIPT2A6NK58 231 aa2.96□□□□□ -1.94
HERC1-211ENST00000560983 MCIDASD6RGH6 385 aa2.96□□□□□ -1.94
HERC1-211ENST00000560983 H3BNH8 94 aa2.96□□□□□ -1.94
HERC1-211ENST00000560983 H3BUX3 64 aa2.96□□□□□ -1.94
HERC1-211ENST00000560983 ANKRD28O15084 1053 aa2.96□□□□□ -1.94
HERC1-211ENST00000560983 ZNF208O43345 1280 aa2.96□□□□□ -1.94
HERC1-211ENST00000560983 ENSAO43768 121 aaKnown RBP2.96□□□□□ -1.94
HERC1-211ENST00000560983 BANF1O75531 89 aa2.96□□□□□ -1.94
HERC1-211ENST00000560983 DEDDO75618 318 aa2.96□□□□□ -1.94
HERC1-211ENST00000560983 FCN3O75636 299 aa2.96□□□□□ -1.94
HERC1-211ENST00000560983 FSTL3O95633 263 aa2.96□□□□□ -1.94
HERC1-211ENST00000560983 HSPA4LO95757 839 aa2.96□□□□□ -1.94
HERC1-211ENST00000560983 PDYNP01213 254 aa2.96□□□□□ -1.94
HERC1-211ENST00000560983 IGF2P01344 180 aa2.96□□□□□ -1.94
HERC1-211ENST00000560983 QDPRP09417 244 aa2.96□□□□□ -1.94
HERC1-211ENST00000560983 FRMD6-AS1P0C7T7 363 aa2.96□□□□□ -1.94
HERC1-211ENST00000560983 UBL4AP11441 157 aa2.96□□□□□ -1.94
HERC1-211ENST00000560983 FCGR1AP12314 374 aa2.96□□□□□ -1.94
HERC1-211ENST00000560983 CHN1P15882 459 aa2.96□□□□□ -1.94
HERC1-211ENST00000560983 STX2P32856 288 aa2.96□□□□□ -1.94
HERC1-211ENST00000560983 TNFSF8P32971 234 aa2.96□□□□□ -1.94
HERC1-211ENST00000560983 MPV17P39210 176 aa2.96□□□□□ -1.94
HERC1-211ENST00000560983 PSMB10P40306 273 aa2.96□□□□□ -1.94
HERC1-211ENST00000560983 PITPNBP48739 271 aa2.96□□□□□ -1.94
HERC1-211ENST00000560983 CCR4P51679 360 aa2.96□□□□□ -1.94
HERC1-211ENST00000560983 CDH13P55290 713 aa2.96□□□□□ -1.94
HERC1-211ENST00000560983 UBASH3AP57075 661 aa2.96□□□□□ -1.94
HERC1-211ENST00000560983 TNFAIP6P98066 277 aaPredicted RBP2.96□□□□□ -1.94
HERC1-211ENST00000560983 PRB3Q04118 309 aaPredicted RBP2.96□□□□□ -1.94
HERC1-211ENST00000560983 RBBP4Q09028 425 aa2.96□□□□□ -1.94
HERC1-211ENST00000560983 GTF2H2Q13888 395 aa2.96□□□□□ -1.94
HERC1-211ENST00000560983 CEACAM7Q14002 265 aa2.96□□□□□ -1.94
HERC1-211ENST00000560983 STX1AQ16623 288 aa2.96□□□□□ -1.94
HERC1-211ENST00000560983 IZUMO4Q1ZYL8 232 aa2.96□□□□□ -1.94
HERC1-211ENST00000560983 ZNF404Q494X3 552 aa2.96□□□□□ -1.94
HERC1-211ENST00000560983 VPS26BQ4G0F5 336 aa2.96□□□□□ -1.94
HERC1-211ENST00000560983 ALG10Q5BKT4 473 aa2.96□□□□□ -1.94
HERC1-211ENST00000560983 ALG10BQ5I7T1 473 aa2.96□□□□□ -1.94
HERC1-211ENST00000560983 FAM201AQ5SY85 155 aa2.96□□□□□ -1.94
HERC1-211ENST00000560983 THEM4Q5T1C6 240 aa2.96□□□□□ -1.94
HERC1-211ENST00000560983 RNASEH2BQ5TBB1 312 aaKnown RBP2.96□□□□□ -1.94
HERC1-211ENST00000560983 TMEM225Q6GV28 225 aa2.96□□□□□ -1.94
HERC1-211ENST00000560983 CDC73Q6P1J9 531 aa2.96□□□□□ -1.94
HERC1-211ENST00000560983 GTF2H2CQ6P1K8 395 aa2.96□□□□□ -1.94
HERC1-211ENST00000560983 SASS6Q6UVJ0 657 aa2.96□□□□□ -1.94
HERC1-211ENST00000560983 CCDC121Q6ZUS5 278 aa2.96□□□□□ -1.94
HERC1-211ENST00000560983 PIWIL3Q7Z3Z3 882 aaKnown RBP2.96□□□□□ -1.94
HERC1-211ENST00000560983 GRINAQ7Z429 371 aa2.96□□□□□ -1.94
HERC1-211ENST00000560983 GOLGA7Q7Z5G4 137 aa2.96□□□□□ -1.94
HERC1-211ENST00000560983 SKA3Q8IX90 412 aa2.96□□□□□ -1.94
HERC1-211ENST00000560983 KDM8Q8N371 416 aa2.96□□□□□ -1.94
HERC1-211ENST00000560983 PNKDQ8N490 385 aa2.96□□□□□ -1.94
HERC1-211ENST00000560983 NAT8LQ8N9F0 302 aa2.96□□□□□ -1.94
HERC1-211ENST00000560983 SLC30A7Q8NEW0 376 aa2.96□□□□□ -1.94
HERC1-211ENST00000560983 STAG3L4Q8TBR4 150 aa2.96□□□□□ -1.94
HERC1-211ENST00000560983 MGARPQ8TDB4 240 aa2.96□□□□□ -1.94
HERC1-211ENST00000560983 C17orf50Q8WW18 174 aa2.96□□□□□ -1.94
HERC1-211ENST00000560983 RORBQ92753 470 aa2.96□□□□□ -1.94
HERC1-211ENST00000560983 EXT2Q93063 718 aa2.96□□□□□ -1.94
HERC1-211ENST00000560983 MYDGFQ969H8 173 aa2.96□□□□□ -1.94
HERC1-211ENST00000560983 HES6Q96HZ4 224 aa2.96□□□□□ -1.94
HERC1-211ENST00000560983 SSX3Q99909 188 aa2.96□□□□□ -1.94
HERC1-211ENST00000560983 BPIFA3Q9BQP9 254 aa2.96□□□□□ -1.94
HERC1-211ENST00000560983 DCTN5Q9BTE1 182 aa2.96□□□□□ -1.94
HERC1-211ENST00000560983 CDCA4Q9BXL8 241 aa2.96□□□□□ -1.94
HERC1-211ENST00000560983 NPFFR1Q9GZQ6 430 aa2.96□□□□□ -1.94
HERC1-211ENST00000560983 ALG9Q9H6U8 611 aa2.96□□□□□ -1.94
HERC1-211ENST00000560983 NOL11Q9H8H0 719 aaKnown RBP2.96□□□□□ -1.94
HERC1-211ENST00000560983 CAB39LQ9H9S4 337 aa2.96□□□□□ -1.94
HERC1-211ENST00000560983 TCF7L2Q9NQB0 619 aa2.96□□□□□ -1.94
HERC1-211ENST00000560983 NUDT4Q9NZJ9 180 aa2.96□□□□□ -1.94
HERC1-211ENST00000560983 KIF17Q9P2E2 1029 aa2.96□□□□□ -1.94
HERC1-211ENST00000560983 CLN8Q9UBY8 286 aa2.96□□□□□ -1.94
HERC1-211ENST00000560983 TSSC4Q9Y5U2 329 aaPredicted RBP2.96□□□□□ -1.94
HERC1-211ENST00000560983 SPIN1Q9Y657 262 aaPredicted RBP2.96□□□□□ -1.94
HERC1-211ENST00000560983 KCNE3Q9Y6H6 103 aa2.96□□□□□ -1.94
HERC1-211ENST00000560983 RNF213Q63HN8 5207 aa2.96□□□□□ -1.94
HERC1-211ENST00000560983 MUC4Q99102 2169 aa2.95□□□□□ -1.94
HERC1-211ENST00000560983 TMED7-TICAM2A0A0A6YYA0 188 aa2.95□□□□□ -1.94
HERC1-211ENST00000560983 A0A1W2PRD5 423 aa2.95□□□□□ -1.94
HERC1-211ENST00000560983 A0A1W2PRF3 423 aa2.95□□□□□ -1.94
HERC1-211ENST00000560983 A0A1W2PRM7 423 aa2.95□□□□□ -1.94
HERC1-211ENST00000560983 MIF4GDA9UHW6 222 aaKnown RBP2.95□□□□□ -1.94
HERC1-211ENST00000560983 SUPT3HB4E1H0 165 aa2.95□□□□□ -1.94
HERC1-211ENST00000560983 PHYHO14832 338 aa2.95□□□□□ -1.94
HERC1-211ENST00000560983 NPFFO15130 113 aa2.95□□□□□ -1.94
HERC1-211ENST00000560983 RAD51CO43502 376 aa2.95□□□□□ -1.94
HERC1-211ENST00000560983 SYNGR1O43759 233 aa2.95□□□□□ -1.94
HERC1-211ENST00000560983 PCDH7O60245 1069 aa2.95□□□□□ -1.94
HERC1-211ENST00000560983 FCMRO60667 390 aa2.95□□□□□ -1.94
HERC1-211ENST00000560983 SUPT3HO75486 399 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms