RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 PHYHO14832 338 aa15.44■□□□□ 0.06
TPM1-226ENST00000560959 OPN1SWP03999 348 aa15.44■□□□□ 0.06
TPM1-226ENST00000560959 LIPFP07098 398 aa15.44■□□□□ 0.06
TPM1-226ENST00000560959 MSR1P21757 451 aa15.44■□□□□ 0.06
TPM1-226ENST00000560959 PITPNBP48739 271 aa15.44■□□□□ 0.06
TPM1-226ENST00000560959 SLC18A1P54219 525 aa15.44■□□□□ 0.06
TPM1-226ENST00000560959 ENDOGQ14249 297 aaKnown RBP15.44■□□□□ 0.06
TPM1-226ENST00000560959 LAPTM4AQ15012 233 aa15.44■□□□□ 0.06
TPM1-226ENST00000560959 RUNDC3AQ59EK9 446 aa15.44■□□□□ 0.06
TPM1-226ENST00000560959 WDR93Q6P2C0 686 aa15.44■□□□□ 0.06
TPM1-226ENST00000560959 DLEU7Q6UYE1 221 aa15.44■□□□□ 0.06
TPM1-226ENST00000560959 C1orf87Q8N0U7 546 aa15.44■□□□□ 0.06
TPM1-226ENST00000560959 ANKRD42Q8N9B4 389 aa15.44■□□□□ 0.06
TPM1-226ENST00000560959 OR13G1Q8NGZ3 307 aa15.44■□□□□ 0.06
TPM1-226ENST00000560959 MOSPD2Q8NHP6 518 aa15.44■□□□□ 0.06
TPM1-226ENST00000560959 RASSF5Q8WWW0 418 aa15.44■□□□□ 0.06
TPM1-226ENST00000560959 MEGF10Q96KG7 1140 aa15.44■□□□□ 0.06
TPM1-226ENST00000560959 CPPED1Q9BRF8 314 aaPredicted RBP15.44■□□□□ 0.06
TPM1-226ENST00000560959 POLR2J2Q9GZM3 115 aaKnown RBP15.44■□□□□ 0.06
TPM1-226ENST00000560959 POLR2J3Q9H1A7 115 aaKnown RBP15.44■□□□□ 0.06
TPM1-226ENST00000560959 TCF7L1Q9HCS4 588 aa15.44■□□□□ 0.06
TPM1-226ENST00000560959 CCDC167Q9P0B6 97 aa15.44■□□□□ 0.06
TPM1-226ENST00000560959 CLN8Q9UBY8 286 aa15.44■□□□□ 0.06
TPM1-226ENST00000560959 HTR3EA5X5Y0 456 aa15.43■□□□□ 0.06
TPM1-226ENST00000560959 C5orf63A6NC05 138 aa15.43■□□□□ 0.06
TPM1-226ENST00000560959 LRRC30A6NM36 301 aa15.43■□□□□ 0.06
TPM1-226ENST00000560959 ENSAO43768 121 aaKnown RBP15.43■□□□□ 0.06
TPM1-226ENST00000560959 THRBP10828 461 aa15.43■□□□□ 0.06
TPM1-226ENST00000560959 SRP9P49458 86 aaKnown RBP15.43■□□□□ 0.06
TPM1-226ENST00000560959 RPL27P61353 136 aaKnown RBP15.43■□□□□ 0.06
TPM1-226ENST00000560959 WDR25Q64LD2 544 aaPredicted RBP15.43■□□□□ 0.06
TPM1-226ENST00000560959 ZNF841Q6ZN19 808 aa15.43■□□□□ 0.06
TPM1-226ENST00000560959 CROCCP2Q86T23 111 aa15.43■□□□□ 0.06
TPM1-226ENST00000560959 C1QL4Q86Z23 238 aa15.43■□□□□ 0.06
TPM1-226ENST00000560959 ATG16L2Q8NAA4 619 aa15.43■□□□□ 0.06
TPM1-226ENST00000560959 PFN4Q8NHR9 129 aa15.43■□□□□ 0.06
TPM1-226ENST00000560959 CENPHQ9H3R5 247 aa15.43■□□□□ 0.06
TPM1-226ENST00000560959 HIF3AQ9Y2N7 669 aa15.43■□□□□ 0.06
TPM1-226ENST00000560959 CYB5R3P00387 301 aaPredicted RBP15.42■□□□□ 0.06
TPM1-226ENST00000560959 NPY4RP50391 375 aa15.42■□□□□ 0.06
TPM1-226ENST00000560959 SCRN3Q0VDG4 424 aa15.42■□□□□ 0.06
TPM1-226ENST00000560959 ALG10Q5BKT4 473 aa15.42■□□□□ 0.06
TPM1-226ENST00000560959 FBXW12Q6X9E4 464 aa15.42■□□□□ 0.06
TPM1-226ENST00000560959 DCDC5Q6ZRR9 648 aa15.42■□□□□ 0.06
TPM1-226ENST00000560959 NKAIN4Q8IVV8 208 aa15.42■□□□□ 0.06
TPM1-226ENST00000560959 ZSCAN4Q8NAM6 433 aaPredicted RBP15.42■□□□□ 0.06
TPM1-226ENST00000560959 PCYOX1LQ8NBM8 494 aa15.42■□□□□ 0.06
TPM1-226ENST00000560959 OR8G5Q8NG78 346 aa15.42■□□□□ 0.06
TPM1-226ENST00000560959 ZNF420Q8TAQ5 688 aaPredicted RBP15.42■□□□□ 0.06
TPM1-226ENST00000560959 TMEM239Q8WW34 195 aa15.42■□□□□ 0.06
TPM1-226ENST00000560959 GATAD2BQ8WXI9 593 aa15.42■□□□□ 0.06
TPM1-226ENST00000560959 C16orf95Q9H693 158 aa15.42■□□□□ 0.06
TPM1-226ENST00000560959 POLE4Q9NR33 117 aa15.42■□□□□ 0.06
TPM1-226ENST00000560959 C20orf141Q9NUB4 165 aa15.42■□□□□ 0.06
TPM1-226ENST00000560959 USH1CQ9Y6N9 552 aa15.42■□□□□ 0.06
TPM1-226ENST00000560959 TMEM120BA0PK00 339 aa15.41■□□□□ 0.06
TPM1-226ENST00000560959 ZNF205O95201 554 aa15.41■□□□□ 0.06
TPM1-226ENST00000560959 TSPAN15O95858 294 aa15.41■□□□□ 0.06
TPM1-226ENST00000560959 CYP51A1Q16850 503 aa15.41■□□□□ 0.06
TPM1-226ENST00000560959 C2orf68Q2NKX9 166 aa15.41■□□□□ 0.06
TPM1-226ENST00000560959 CD276Q5ZPR3 534 aa15.41■□□□□ 0.06
TPM1-226ENST00000560959 SLC26A7Q8TE54 656 aa15.41■□□□□ 0.06
TPM1-226ENST00000560959 TMEM255BQ8WV15 326 aa15.41■□□□□ 0.06
TPM1-226ENST00000560959 TRIM15Q9C019 465 aa15.41■□□□□ 0.06
TPM1-226ENST00000560959 ACOXLQ9NUZ1 547 aa15.41■□□□□ 0.06
TPM1-226ENST00000560959 DOCK11Q5JSL3 2073 aa15.4■□□□□ 0.06
TPM1-226ENST00000560959 CENPVL3A0A0U1RRI6 287 aa15.4■□□□□ 0.06
TPM1-226ENST00000560959 A0A1B0GWJ7 208 aa15.4■□□□□ 0.06
TPM1-226ENST00000560959 A6NIZ1 184 aa15.4■□□□□ 0.06
TPM1-226ENST00000560959 ZNF879B4DU55 563 aa15.4■□□□□ 0.06
TPM1-226ENST00000560959 POLR3GO15318 223 aaPredicted RBP15.4■□□□□ 0.06
TPM1-226ENST00000560959 SGCEO43556 437 aa15.4■□□□□ 0.06
TPM1-226ENST00000560959 GPR137BO60478 399 aa15.4■□□□□ 0.06
TPM1-226ENST00000560959 OR5F1O95221 314 aa15.4■□□□□ 0.06
TPM1-226ENST00000560959 MMP9P14780 707 aa15.4■□□□□ 0.06
TPM1-226ENST00000560959 CFHR2P36980 270 aa15.4■□□□□ 0.06
TPM1-226ENST00000560959 PSMB10P40306 273 aa15.4■□□□□ 0.06
TPM1-226ENST00000560959 GATA4P43694 442 aa15.4■□□□□ 0.06
TPM1-226ENST00000560959 HTR5AP47898 357 aa15.4■□□□□ 0.06
TPM1-226ENST00000560959 RGS6P49758 472 aa15.4■□□□□ 0.06
TPM1-226ENST00000560959 RAP1BP61224 184 aa15.4■□□□□ 0.06
TPM1-226ENST00000560959 RAP1AP62834 184 aa15.4■□□□□ 0.06
TPM1-226ENST00000560959 KPRPQ5T749 579 aaPredicted RBP15.4■□□□□ 0.06
TPM1-226ENST00000560959 INTS11Q5TA45 600 aaKnown RBP15.4■□□□□ 0.06
TPM1-226ENST00000560959 GDPGP1Q6ZNW5 385 aa15.4■□□□□ 0.06
TPM1-226ENST00000560959 LDLRAD3Q86YD5 345 aa15.4■□□□□ 0.06
TPM1-226ENST00000560959 OR5L1Q8NGL2 311 aa15.4■□□□□ 0.06
TPM1-226ENST00000560959 FAM110DQ8TAY7 271 aaPredicted RBP15.4■□□□□ 0.06
TPM1-226ENST00000560959 LRRC8CQ8TDW0 803 aa15.4■□□□□ 0.06
TPM1-226ENST00000560959 ERGIC1Q969X5 290 aa15.4■□□□□ 0.06
TPM1-226ENST00000560959 TAMM41Q96BW9 452 aa15.4■□□□□ 0.06
TPM1-226ENST00000560959 RASD2Q96D21 266 aa15.4■□□□□ 0.06
TPM1-226ENST00000560959 ZNF582Q96NG8 517 aaPredicted RBP15.4■□□□□ 0.06
TPM1-226ENST00000560959 PCGF1Q9BSM1 259 aa15.4■□□□□ 0.06
TPM1-226ENST00000560959 CDADC1Q9BWV3 514 aa15.4■□□□□ 0.06
TPM1-226ENST00000560959 MED31Q9Y3C7 131 aa15.4■□□□□ 0.06
TPM1-226ENST00000560959 A0A1W2PPL8 197 aa15.39■□□□□ 0.05
TPM1-226ENST00000560959 C22orf46C9J442 243 aa15.39■□□□□ 0.05
TPM1-226ENST00000560959 DOK2O60496 412 aa15.39■□□□□ 0.05
TPM1-226ENST00000560959 TOX4O94842 621 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms