RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 C17orf100A8MU93 164 aa11.1□□□□□ -0.63
CTDSPL2-209ENST00000560620 CD5LO43866 347 aa11.1□□□□□ -0.63
CTDSPL2-209ENST00000560620 TIMM8AO60220 97 aaPredicted RBP11.1□□□□□ -0.63
CTDSPL2-209ENST00000560620 FKBP6O75344 327 aa11.1□□□□□ -0.63
CTDSPL2-209ENST00000560620 ATP5HO75947 161 aa11.1□□□□□ -0.63
CTDSPL2-209ENST00000560620 HPXP02790 462 aa11.1□□□□□ -0.63
CTDSPL2-209ENST00000560620 IGFBP1P08833 259 aaPredicted RBP11.1□□□□□ -0.63
CTDSPL2-209ENST00000560620 ZNF823P16415 610 aa11.1□□□□□ -0.63
CTDSPL2-209ENST00000560620 POU1F1P28069 291 aa11.1□□□□□ -0.63
CTDSPL2-209ENST00000560620 PYCR1P32322 319 aa11.1□□□□□ -0.63
CTDSPL2-209ENST00000560620 MPV17P39210 176 aa11.1□□□□□ -0.63
CTDSPL2-209ENST00000560620 MAGEB1P43366 347 aa11.1□□□□□ -0.63
CTDSPL2-209ENST00000560620 ZNF81P51508 661 aa11.1□□□□□ -0.63
CTDSPL2-209ENST00000560620 GK3PQ14409 553 aa11.1□□□□□ -0.63
CTDSPL2-209ENST00000560620 KCNMB1Q16558 191 aa11.1□□□□□ -0.63
CTDSPL2-209ENST00000560620 SLC26A10Q8NG04 563 aa11.1□□□□□ -0.63
CTDSPL2-209ENST00000560620 OR9Q1Q8NGQ5 310 aa11.1□□□□□ -0.63
CTDSPL2-209ENST00000560620 OR2T4Q8NH00 348 aa11.1□□□□□ -0.63
CTDSPL2-209ENST00000560620 OR1F12Q8NHA8 337 aa11.1□□□□□ -0.63
CTDSPL2-209ENST00000560620 KLF14Q8TD94 323 aaPredicted RBP11.1□□□□□ -0.63
CTDSPL2-209ENST00000560620 MARS2Q96GW9 593 aaKnown RBP11.1□□□□□ -0.63
CTDSPL2-209ENST00000560620 PITX2Q99697 317 aa11.1□□□□□ -0.63
CTDSPL2-209ENST00000560620 NIPSNAP1Q9BPW8 284 aa11.1□□□□□ -0.63
CTDSPL2-209ENST00000560620 DGCR6LQ9BY27 220 aa11.1□□□□□ -0.63
CTDSPL2-209ENST00000560620 CADM1Q9BY67 442 aaKnown RBP11.1□□□□□ -0.63
CTDSPL2-209ENST00000560620 BAIAP2Q9UQB8 552 aa11.1□□□□□ -0.63
CTDSPL2-209ENST00000560620 RTTNQ86VV8 2226 aa11.09□□□□□ -0.63
CTDSPL2-209ENST00000560620 NIPBLQ6KC79 2804 aaeCLIP11.09□□□□□ -0.63
CTDSPL2-209ENST00000560620 ZANQ9Y493 2812 aa11.09□□□□□ -0.63
CTDSPL2-209ENST00000560620 OR6C6A6NF89 314 aa11.09□□□□□ -0.63
CTDSPL2-209ENST00000560620 RIIAD1A6NNX1 92 aa11.09□□□□□ -0.63
CTDSPL2-209ENST00000560620 VWC2LB2RUY7 222 aa11.09□□□□□ -0.63
CTDSPL2-209ENST00000560620 SPRY3O43610 288 aa11.09□□□□□ -0.63
CTDSPL2-209ENST00000560620 TLX2O43763 284 aaPredicted RBP11.09□□□□□ -0.63
CTDSPL2-209ENST00000560620 CDC14BO60729 498 aa11.09□□□□□ -0.63
CTDSPL2-209ENST00000560620 IFNGP01579 166 aa11.09□□□□□ -0.63
CTDSPL2-209ENST00000560620 IGHV3-13P01766 116 aa11.09□□□□□ -0.63
CTDSPL2-209ENST00000560620 TFP02787 698 aa11.09□□□□□ -0.63
CTDSPL2-209ENST00000560620 DBHP09172 617 aa11.09□□□□□ -0.63
CTDSPL2-209ENST00000560620 GAAP10253 952 aa11.09□□□□□ -0.63
CTDSPL2-209ENST00000560620 HOXB4P17483 251 aaPredicted RBP11.09□□□□□ -0.63
CTDSPL2-209ENST00000560620 KRTAP1-1Q07627 177 aa11.09□□□□□ -0.63
CTDSPL2-209ENST00000560620 COX10Q12887 443 aa11.09□□□□□ -0.63
CTDSPL2-209ENST00000560620 TSTQ16762 297 aaKnown RBP11.09□□□□□ -0.63
CTDSPL2-209ENST00000560620 PCGF3Q3KNV8 242 aa11.09□□□□□ -0.63
CTDSPL2-209ENST00000560620 CCDC92Q53HC0 331 aaPredicted RBP11.09□□□□□ -0.63
CTDSPL2-209ENST00000560620 ELFN2Q5R3F8 820 aa11.09□□□□□ -0.63
CTDSPL2-209ENST00000560620 MBNL2Q5VZF2 373 aaKnown RBP11.09□□□□□ -0.63
CTDSPL2-209ENST00000560620 CYB5R2Q6BCY4 276 aa11.09□□□□□ -0.63
CTDSPL2-209ENST00000560620 ZBTB46Q86UZ6 589 aa11.09□□□□□ -0.63
CTDSPL2-209ENST00000560620 LNX2Q8N448 690 aa11.09□□□□□ -0.63
CTDSPL2-209ENST00000560620 SLC37A3Q8NCC5 494 aa11.09□□□□□ -0.63
CTDSPL2-209ENST00000560620 NPEPL1Q8NDH3 523 aa11.09□□□□□ -0.63
CTDSPL2-209ENST00000560620 OR51L1Q8NGJ5 315 aa11.09□□□□□ -0.63
CTDSPL2-209ENST00000560620 RDH5Q92781 318 aa11.09□□□□□ -0.63
CTDSPL2-209ENST00000560620 POM121Q96HA1 1249 aa11.09□□□□□ -0.63
CTDSPL2-209ENST00000560620 COG8Q96MW5 612 aa11.09□□□□□ -0.63
CTDSPL2-209ENST00000560620 HDHD2Q9H0R4 259 aa11.09□□□□□ -0.63
CTDSPL2-209ENST00000560620 KIF17Q9P2E2 1029 aa11.09□□□□□ -0.63
CTDSPL2-209ENST00000560620 KLHL21Q9UJP4 597 aa11.09□□□□□ -0.63
CTDSPL2-209ENST00000560620 LHFPL6Q9Y693 200 aa11.09□□□□□ -0.63
CTDSPL2-209ENST00000560620 CSPG4Q6UVK1 2322 aa11.08□□□□□ -0.64
CTDSPL2-209ENST00000560620 CHD3Q12873 2000 aaKnown RBP11.08□□□□□ -0.64
CTDSPL2-209ENST00000560620 NF1P21359 2839 aa11.08□□□□□ -0.64
CTDSPL2-209ENST00000560620 A0A096LNT2 108 aa11.08□□□□□ -0.64
CTDSPL2-209ENST00000560620 IGHV4-61A0A0C4DH41 118 aa11.08□□□□□ -0.64
CTDSPL2-209ENST00000560620 TCRBV3S1A0A5B6 114 aa11.08□□□□□ -0.64
CTDSPL2-209ENST00000560620 LRP5LA4QPB2 252 aa11.08□□□□□ -0.64
CTDSPL2-209ENST00000560620 TVP23AA6NH52 213 aa11.08□□□□□ -0.64
CTDSPL2-209ENST00000560620 A8MV72 311 aaPredicted RBP11.08□□□□□ -0.64
CTDSPL2-209ENST00000560620 PPIHO43447 177 aaKnown RBP11.08□□□□□ -0.64
CTDSPL2-209ENST00000560620 TIPRLO75663 272 aa11.08□□□□□ -0.64
CTDSPL2-209ENST00000560620 GYPBP06028 91 aa11.08□□□□□ -0.64
CTDSPL2-209ENST00000560620 ZNF16P17020 682 aaPredicted RBP11.08□□□□□ -0.64
CTDSPL2-209ENST00000560620 ZNF3P17036 446 aa11.08□□□□□ -0.64
CTDSPL2-209ENST00000560620 PRKACGP22612 351 aa11.08□□□□□ -0.64
CTDSPL2-209ENST00000560620 COL8A2P25067 703 aa11.08□□□□□ -0.64
CTDSPL2-209ENST00000560620 GIFP27352 417 aa11.08□□□□□ -0.64
CTDSPL2-209ENST00000560620 RGS6P49758 472 aa11.08□□□□□ -0.64
CTDSPL2-209ENST00000560620 GZMKP49863 264 aa11.08□□□□□ -0.64
CTDSPL2-209ENST00000560620 CHN2P52757 468 aa11.08□□□□□ -0.64
CTDSPL2-209ENST00000560620 CRMP1Q14194 572 aa11.08□□□□□ -0.64
CTDSPL2-209ENST00000560620 ZMAT1Q5H9K5 638 aa11.08□□□□□ -0.64
CTDSPL2-209ENST00000560620 C1orf146Q5VVC0 180 aa11.08□□□□□ -0.64
CTDSPL2-209ENST00000560620 TMEM179BQ7Z7N9 219 aa11.08□□□□□ -0.64
CTDSPL2-209ENST00000560620 HS3ST5Q8IZT8 346 aa11.08□□□□□ -0.64
CTDSPL2-209ENST00000560620 ATG16L2Q8NAA4 619 aa11.08□□□□□ -0.64
CTDSPL2-209ENST00000560620 OR5L1Q8NGL2 311 aa11.08□□□□□ -0.64
CTDSPL2-209ENST00000560620 OR6K6Q8NGW6 343 aa11.08□□□□□ -0.64
CTDSPL2-209ENST00000560620 OR4Q3Q8NH05 313 aa11.08□□□□□ -0.64
CTDSPL2-209ENST00000560620 GTF3AQ92664 365 aaKnown RBP11.08□□□□□ -0.64
CTDSPL2-209ENST00000560620 NARFLQ9H6Q4 476 aa11.08□□□□□ -0.64
CTDSPL2-209ENST00000560620 CHODLQ9H9P2 273 aa11.08□□□□□ -0.64
CTDSPL2-209ENST00000560620 SAP30LQ9HAJ7 183 aa11.08□□□□□ -0.64
CTDSPL2-209ENST00000560620 CYSLTR2Q9NS75 346 aa11.08□□□□□ -0.64
CTDSPL2-209ENST00000560620 TBCCD1Q9NVR7 557 aa11.08□□□□□ -0.64
CTDSPL2-209ENST00000560620 DNAJB9Q9UBS3 223 aa11.08□□□□□ -0.64
CTDSPL2-209ENST00000560620 STARD10Q9Y365 291 aa11.08□□□□□ -0.64
CTDSPL2-209ENST00000560620 HIVEP2P31629 2446 aa11.08□□□□□ -0.64
CTDSPL2-209ENST00000560620 ZFHX3Q15911 3703 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms