RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 FAM25AB3EWG3 89 aa9.6□□□□□ -0.87
SNRPA1-211ENST00000560433 FAM25CB3EWG5 89 aa9.6□□□□□ -0.87
SNRPA1-211ENST00000560433 FAM25GB3EWG6 89 aa9.6□□□□□ -0.87
SNRPA1-211ENST00000560433 ARL6IP5O75915 188 aa9.6□□□□□ -0.87
SNRPA1-211ENST00000560433 HRGP04196 525 aa9.6□□□□□ -0.87
SNRPA1-211ENST00000560433 ADRA2CP18825 462 aa9.6□□□□□ -0.87
SNRPA1-211ENST00000560433 ELK1P19419 428 aa9.6□□□□□ -0.87
SNRPA1-211ENST00000560433 APEX1P27695 318 aaKnown RBP9.6□□□□□ -0.87
SNRPA1-211ENST00000560433 PLA2G5P39877 138 aa9.6□□□□□ -0.87
SNRPA1-211ENST00000560433 ZNF45Q02386 682 aa9.6□□□□□ -0.87
SNRPA1-211ENST00000560433 ABLIM2Q6H8Q1 611 aa9.6□□□□□ -0.87
SNRPA1-211ENST00000560433 CNIH2Q6PI25 160 aa9.6□□□□□ -0.87
SNRPA1-211ENST00000560433 LINC00299Q6ZSB3 139 aa9.6□□□□□ -0.87
SNRPA1-211ENST00000560433 CATSPERDQ86XM0 798 aa9.6□□□□□ -0.87
SNRPA1-211ENST00000560433 SAMD12Q8N8I0 201 aa9.6□□□□□ -0.87
SNRPA1-211ENST00000560433 ZNF454Q8N9F8 522 aa9.6□□□□□ -0.87
SNRPA1-211ENST00000560433 TMEM178AQ8NBL3 297 aa9.6□□□□□ -0.87
SNRPA1-211ENST00000560433 AP3S1Q92572 193 aa9.6□□□□□ -0.87
SNRPA1-211ENST00000560433 SIAEQ9HAT2 523 aa9.6□□□□□ -0.87
SNRPA1-211ENST00000560433 G6PC2Q9NQR9 355 aa9.6□□□□□ -0.87
SNRPA1-211ENST00000560433 RELNP78509 3460 aa9.59□□□□□ -0.87
SNRPA1-211ENST00000560433 TMEM212A6NML5 194 aa9.59□□□□□ -0.87
SNRPA1-211ENST00000560433 TFECO14948 347 aaPredicted RBP9.59□□□□□ -0.87
SNRPA1-211ENST00000560433 SRSF10O75494 262 aaKnown RBP9.59□□□□□ -0.87
SNRPA1-211ENST00000560433 UPK1BO75841 260 aa9.59□□□□□ -0.87
SNRPA1-211ENST00000560433 GATBO75879 557 aaKnown RBP9.59□□□□□ -0.87
SNRPA1-211ENST00000560433 EIF4EP06730 217 aaKnown RBP9.59□□□□□ -0.87
SNRPA1-211ENST00000560433 HSD11B1P28845 292 aa9.59□□□□□ -0.87
SNRPA1-211ENST00000560433 GUCA1AP43080 201 aaPredicted RBP9.59□□□□□ -0.87
SNRPA1-211ENST00000560433 FOXG1P55316 489 aaPredicted RBP9.59□□□□□ -0.87
SNRPA1-211ENST00000560433 TAF13Q15543 124 aa9.59□□□□□ -0.87
SNRPA1-211ENST00000560433 ASPHD2Q6ICH7 369 aa9.59□□□□□ -0.87
SNRPA1-211ENST00000560433 STAC2Q6ZMT1 411 aa9.59□□□□□ -0.87
SNRPA1-211ENST00000560433 HDDC2Q7Z4H3 204 aa9.59□□□□□ -0.87
SNRPA1-211ENST00000560433 LYSMD2Q8IV50 215 aa9.59□□□□□ -0.87
SNRPA1-211ENST00000560433 C20orf196Q8IYI0 205 aa9.59□□□□□ -0.87
SNRPA1-211ENST00000560433 UBE2J2Q8N2K1 259 aa9.59□□□□□ -0.87
SNRPA1-211ENST00000560433 CENPSQ8N2Z9 138 aa9.59□□□□□ -0.87
SNRPA1-211ENST00000560433 FAM109AQ8N4B1 249 aa9.59□□□□□ -0.87
SNRPA1-211ENST00000560433 GPR148Q8TDV2 347 aa9.59□□□□□ -0.87
SNRPA1-211ENST00000560433 NABP1Q96AH0 204 aa9.59□□□□□ -0.87
SNRPA1-211ENST00000560433 TCF7L1Q9HCS4 588 aa9.59□□□□□ -0.87
SNRPA1-211ENST00000560433 ZNF319Q9P2F9 582 aa9.59□□□□□ -0.87
SNRPA1-211ENST00000560433 OR52A1Q9UKL2 312 aa9.59□□□□□ -0.87
SNRPA1-211ENST00000560433 CAMK2AQ9UQM7 478 aa9.59□□□□□ -0.87
SNRPA1-211ENST00000560433 R4GMQ9 66 aa9.59□□□□□ -0.87
SNRPA1-211ENST00000560433 TRGV5A0A0B4J1U4 118 aa9.58□□□□□ -0.88
SNRPA1-211ENST00000560433 E9PLN8 166 aa9.58□□□□□ -0.88
SNRPA1-211ENST00000560433 F5H5K5 113 aa9.58□□□□□ -0.88
SNRPA1-211ENST00000560433 TAF4O00268 1085 aa9.58□□□□□ -0.88
SNRPA1-211ENST00000560433 CYTIPO60759 359 aa9.58□□□□□ -0.88
SNRPA1-211ENST00000560433 PDGFAP04085 211 aa9.58□□□□□ -0.88
SNRPA1-211ENST00000560433 DBHP09172 617 aa9.58□□□□□ -0.88
SNRPA1-211ENST00000560433 EPXP11678 715 aa9.58□□□□□ -0.88
SNRPA1-211ENST00000560433 IL18Q14116 193 aa9.58□□□□□ -0.88
SNRPA1-211ENST00000560433 ENDOGQ14249 297 aaKnown RBP9.58□□□□□ -0.88
SNRPA1-211ENST00000560433 TAB1Q15750 504 aa9.58□□□□□ -0.88
SNRPA1-211ENST00000560433 RGS21Q2M5E4 152 aa9.58□□□□□ -0.88
SNRPA1-211ENST00000560433 CEACAM16Q2WEN9 425 aa9.58□□□□□ -0.88
SNRPA1-211ENST00000560433 TSPO2Q5TGU0 170 aa9.58□□□□□ -0.88
SNRPA1-211ENST00000560433 MEIOBQ8N635 442 aa9.58□□□□□ -0.88
SNRPA1-211ENST00000560433 TRMT10AQ8TBZ6 339 aaKnown RBP9.58□□□□□ -0.88
SNRPA1-211ENST00000560433 FBXO17Q96EF6 278 aa9.58□□□□□ -0.88
SNRPA1-211ENST00000560433 SF3B5Q9BWJ5 86 aaKnown RBP9.58□□□□□ -0.88
SNRPA1-211ENST00000560433 NELFAQ9H3P2 528 aa9.58□□□□□ -0.88
SNRPA1-211ENST00000560433 PNRC2Q9NPJ4 139 aaKnown RBP9.58□□□□□ -0.88
SNRPA1-211ENST00000560433 NOSIPQ9Y314 301 aaKnown RBP9.58□□□□□ -0.88
SNRPA1-211ENST00000560433 IGF2RP11717 2491 aa9.58□□□□□ -0.88
SNRPA1-211ENST00000560433 TRBV5-5A0A0J9YX44 114 aa9.58□□□□□ -0.88
SNRPA1-211ENST00000560433 ACOT7O00154 380 aa9.58□□□□□ -0.88
SNRPA1-211ENST00000560433 SSX4O60224 188 aa9.58□□□□□ -0.88
SNRPA1-211ENST00000560433 SLC43A1O75387 559 aa9.58□□□□□ -0.88
SNRPA1-211ENST00000560433 ZNF254O75437 659 aa9.58□□□□□ -0.88
SNRPA1-211ENST00000560433 TGM6O95932 706 aa9.58□□□□□ -0.88
SNRPA1-211ENST00000560433 CD1AP06126 327 aa9.58□□□□□ -0.88
SNRPA1-211ENST00000560433 ZNF24P17028 368 aa9.58□□□□□ -0.88
SNRPA1-211ENST00000560433 MSR1P21757 451 aa9.58□□□□□ -0.88
SNRPA1-211ENST00000560433 EIF2S3P41091 472 aaKnown RBP9.58□□□□□ -0.88
SNRPA1-211ENST00000560433 PRSS12P56730 875 aa9.58□□□□□ -0.88
SNRPA1-211ENST00000560433 PYDC2Q56P42 97 aa9.58□□□□□ -0.88
SNRPA1-211ENST00000560433 KLHL24Q6TFL4 600 aa9.58□□□□□ -0.88
SNRPA1-211ENST00000560433 DCDC5Q6ZRR9 648 aa9.58□□□□□ -0.88
SNRPA1-211ENST00000560433 ASB5Q8WWX0 329 aa9.58□□□□□ -0.88
SNRPA1-211ENST00000560433 KCNK15Q9H427 330 aa9.58□□□□□ -0.88
SNRPA1-211ENST00000560433 C12orf49Q9H741 205 aa9.58□□□□□ -0.88
SNRPA1-211ENST00000560433 DDX28Q9NUL7 540 aaKnown RBP9.58□□□□□ -0.88
SNRPA1-211ENST00000560433 FAM206AQ9NX38 181 aa9.58□□□□□ -0.88
SNRPA1-211ENST00000560433 TRAV1-2A0A0B4J238 106 aa9.57□□□□□ -0.88
SNRPA1-211ENST00000560433 LOC107986453A0A1B0GWG9 222 aa9.57□□□□□ -0.88
SNRPA1-211ENST00000560433 GPR171O14626 319 aa9.57□□□□□ -0.88
SNRPA1-211ENST00000560433 MRPL33O75394 65 aaKnown RBP9.57□□□□□ -0.88
SNRPA1-211ENST00000560433 KRT33AO76009 404 aa9.57□□□□□ -0.88
SNRPA1-211ENST00000560433 ADRB1P08588 477 aa9.57□□□□□ -0.88
SNRPA1-211ENST00000560433 ETV6P41212 452 aa9.57□□□□□ -0.88
SNRPA1-211ENST00000560433 RNASE12Q5GAN4 147 aaKnown RBP9.57□□□□□ -0.88
SNRPA1-211ENST00000560433 C10orf128Q5T292 105 aa9.57□□□□□ -0.88
SNRPA1-211ENST00000560433 PDSS1Q5T2R2 415 aa9.57□□□□□ -0.88
SNRPA1-211ENST00000560433 PAMR1Q6UXH9 720 aa9.57□□□□□ -0.88
SNRPA1-211ENST00000560433 CHMP1BQ7LBR1 199 aa9.57□□□□□ -0.88
SNRPA1-211ENST00000560433 LUZP2Q86TE4 346 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms