RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 MAD2L1BPQ15013 274 aaPredicted RBP12.97□□□□□ -0.33
SNRPA1-210ENST00000560383 MOGQ16653 247 aa12.97□□□□□ -0.33
SNRPA1-210ENST00000560383 MBNL2Q5VZF2 373 aaKnown RBP12.97□□□□□ -0.33
SNRPA1-210ENST00000560383 RFPL4BQ6ZWI9 263 aa12.97□□□□□ -0.33
SNRPA1-210ENST00000560383 VASH1Q7L8A9 365 aaPredicted RBP12.97□□□□□ -0.33
SNRPA1-210ENST00000560383 PHC2Q8IXK0 858 aa12.97□□□□□ -0.33
SNRPA1-210ENST00000560383 LNX2Q8N448 690 aa12.97□□□□□ -0.33
SNRPA1-210ENST00000560383 SLC26A10Q8NG04 563 aa12.97□□□□□ -0.33
SNRPA1-210ENST00000560383 OR52L1Q8NGH7 329 aa12.97□□□□□ -0.33
SNRPA1-210ENST00000560383 UBASH3BQ8TF42 649 aa12.97□□□□□ -0.33
SNRPA1-210ENST00000560383 MSI2Q96DH6 328 aaKnown RBP12.97□□□□□ -0.33
SNRPA1-210ENST00000560383 C4orf45Q96LM5 186 aa12.97□□□□□ -0.33
SNRPA1-210ENST00000560383 TPK1Q9H3S4 243 aa12.97□□□□□ -0.33
SNRPA1-210ENST00000560383 RERGLQ9H628 205 aa12.97□□□□□ -0.33
SNRPA1-210ENST00000560383 TBCCD1Q9NVR7 557 aa12.97□□□□□ -0.33
SNRPA1-210ENST00000560383 NKIRAS2Q9NYR9 191 aa12.97□□□□□ -0.33
SNRPA1-210ENST00000560383 TAAR3PQ9P1P4 343 aa12.97□□□□□ -0.33
SNRPA1-210ENST00000560383 ASH2LQ9UBL3 628 aa12.97□□□□□ -0.33
SNRPA1-210ENST00000560383 POMPQ9Y244 141 aa12.97□□□□□ -0.33
SNRPA1-210ENST00000560383 TCRBV3S1A0A5B6 114 aa12.96□□□□□ -0.33
SNRPA1-210ENST00000560383 PHF1O43189 567 aaPredicted RBP12.96□□□□□ -0.33
SNRPA1-210ENST00000560383 DOK2O60496 412 aa12.96□□□□□ -0.33
SNRPA1-210ENST00000560383 CST1P01037 141 aa12.96□□□□□ -0.33
SNRPA1-210ENST00000560383 NGFP01138 241 aa12.96□□□□□ -0.33
SNRPA1-210ENST00000560383 TFP02787 698 aa12.96□□□□□ -0.33
SNRPA1-210ENST00000560383 TACSTD2P09758 323 aa12.96□□□□□ -0.33
SNRPA1-210ENST00000560383 NAT2P11245 290 aa12.96□□□□□ -0.33
SNRPA1-210ENST00000560383 HNF1AP20823 631 aa12.96□□□□□ -0.33
SNRPA1-210ENST00000560383 TUBG1P23258 451 aa12.96□□□□□ -0.33
SNRPA1-210ENST00000560383 MRPS11P82912 194 aaKnown RBP12.96□□□□□ -0.33
SNRPA1-210ENST00000560383 GLO1Q04760 184 aa12.96□□□□□ -0.33
SNRPA1-210ENST00000560383 COX10Q12887 443 aa12.96□□□□□ -0.33
SNRPA1-210ENST00000560383 RIN1Q13671 783 aa12.96□□□□□ -0.33
SNRPA1-210ENST00000560383 FLOT2Q14254 428 aa12.96□□□□□ -0.33
SNRPA1-210ENST00000560383 NKPD1Q17RQ9 610 aa12.96□□□□□ -0.33
SNRPA1-210ENST00000560383 ZNF718Q3SXZ3 478 aa12.96□□□□□ -0.33
SNRPA1-210ENST00000560383 CCDC92Q53HC0 331 aaPredicted RBP12.96□□□□□ -0.33
SNRPA1-210ENST00000560383 CLEC12AQ5QGZ9 265 aa12.96□□□□□ -0.33
SNRPA1-210ENST00000560383 ELFN2Q5R3F8 820 aa12.96□□□□□ -0.33
SNRPA1-210ENST00000560383 ARL9Q6T311 187 aa12.96□□□□□ -0.33
SNRPA1-210ENST00000560383 PAPD5Q8NDF8 572 aaKnown RBP12.96□□□□□ -0.33
SNRPA1-210ENST00000560383 SDR9C7Q8NEX9 313 aa12.96□□□□□ -0.33
SNRPA1-210ENST00000560383 OR10G2Q8NGC3 310 aa12.96□□□□□ -0.33
SNRPA1-210ENST00000560383 OR52E2Q8NGJ4 325 aa12.96□□□□□ -0.33
SNRPA1-210ENST00000560383 ABHD4Q8TB40 342 aa12.96□□□□□ -0.33
SNRPA1-210ENST00000560383 SLC25A40Q8TBP6 338 aa12.96□□□□□ -0.33
SNRPA1-210ENST00000560383 KLF14Q8TD94 323 aaPredicted RBP12.96□□□□□ -0.33
SNRPA1-210ENST00000560383 REPIN1Q9BWE0 567 aaKnown RBP12.96□□□□□ -0.33
SNRPA1-210ENST00000560383 CADM1Q9BY67 442 aaKnown RBP12.96□□□□□ -0.33
SNRPA1-210ENST00000560383 ELOVL3Q9HB03 270 aa12.96□□□□□ -0.33
SNRPA1-210ENST00000560383 SRA1Q9HD15 236 aaKnown RBP12.96□□□□□ -0.33
SNRPA1-210ENST00000560383 RPRD1BQ9NQG5 326 aaKnown RBP12.96□□□□□ -0.33
SNRPA1-210ENST00000560383 TUBG2Q9NRH3 451 aa12.96□□□□□ -0.33
SNRPA1-210ENST00000560383 PLEK2Q9NYT0 353 aa12.96□□□□□ -0.33
SNRPA1-210ENST00000560383 BAIAP2Q9UQB8 552 aa12.96□□□□□ -0.33
SNRPA1-210ENST00000560383 LHFPL6Q9Y693 200 aa12.96□□□□□ -0.33
SNRPA1-210ENST00000560383 LOC100289279A0A1B0GTE1 492 aa12.95□□□□□ -0.34
SNRPA1-210ENST00000560383 C17orf100A8MU93 164 aa12.95□□□□□ -0.34
SNRPA1-210ENST00000560383 RER1O15258 196 aa12.95□□□□□ -0.34
SNRPA1-210ENST00000560383 GPANK1O95872 356 aa12.95□□□□□ -0.34
SNRPA1-210ENST00000560383 HPXP02790 462 aa12.95□□□□□ -0.34
SNRPA1-210ENST00000560383 HTR5AP47898 357 aa12.95□□□□□ -0.34
SNRPA1-210ENST00000560383 PPP1CBP62140 327 aa12.95□□□□□ -0.34
SNRPA1-210ENST00000560383 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.95□□□□□ -0.34
SNRPA1-210ENST00000560383 CARTPTQ16568 116 aa12.95□□□□□ -0.34
SNRPA1-210ENST00000560383 PCGF3Q3KNV8 242 aa12.95□□□□□ -0.34
SNRPA1-210ENST00000560383 TMEM255AQ5JRV8 349 aa12.95□□□□□ -0.34
SNRPA1-210ENST00000560383 SLC35F1Q5T1Q4 408 aa12.95□□□□□ -0.34
SNRPA1-210ENST00000560383 OTPQ5XKR4 325 aa12.95□□□□□ -0.34
SNRPA1-210ENST00000560383 GJC3Q8NFK1 279 aa12.95□□□□□ -0.34
SNRPA1-210ENST00000560383 OR1F12Q8NHA8 337 aa12.95□□□□□ -0.34
SNRPA1-210ENST00000560383 HPS1Q92902 700 aa12.95□□□□□ -0.34
SNRPA1-210ENST00000560383 TSSK6Q9BXA6 273 aa12.95□□□□□ -0.34
SNRPA1-210ENST00000560383 OR2J1Q9GZK6 312 aa12.95□□□□□ -0.34
SNRPA1-210ENST00000560383 HINT3Q9NQE9 182 aaKnown RBP12.95□□□□□ -0.34
SNRPA1-210ENST00000560383 KLHL21Q9UJP4 597 aa12.95□□□□□ -0.34
SNRPA1-210ENST00000560383 J3QW42 95 aa12.94□□□□□ -0.34
SNRPA1-210ENST00000560383 NCR1O76036 304 aa12.94□□□□□ -0.34
SNRPA1-210ENST00000560383 ABHD16AO95870 558 aa12.94□□□□□ -0.34
SNRPA1-210ENST00000560383 SRD5A1P18405 259 aa12.94□□□□□ -0.34
SNRPA1-210ENST00000560383 GCH1P30793 250 aa12.94□□□□□ -0.34
SNRPA1-210ENST00000560383 MPV17P39210 176 aa12.94□□□□□ -0.34
SNRPA1-210ENST00000560383 MMP15P51511 669 aa12.94□□□□□ -0.34
SNRPA1-210ENST00000560383 ARHGDIAP52565 204 aa12.94□□□□□ -0.34
SNRPA1-210ENST00000560383 CHN2P52757 468 aa12.94□□□□□ -0.34
SNRPA1-210ENST00000560383 TEKQ02763 1124 aa12.94□□□□□ -0.34
SNRPA1-210ENST00000560383 DBPQ10586 325 aaPredicted RBP12.94□□□□□ -0.34
SNRPA1-210ENST00000560383 MEP1BQ16820 701 aa12.94□□□□□ -0.34
SNRPA1-210ENST00000560383 SLC36A3Q495N2 470 aa12.94□□□□□ -0.34
SNRPA1-210ENST00000560383 FAM120AOSQ5T036 256 aa12.94□□□□□ -0.34
SNRPA1-210ENST00000560383 SPATA46Q5T0L3 261 aa12.94□□□□□ -0.34
SNRPA1-210ENST00000560383 TMEM179BQ7Z7N9 219 aa12.94□□□□□ -0.34
SNRPA1-210ENST00000560383 ICA1LQ8NDH6 482 aa12.94□□□□□ -0.34
SNRPA1-210ENST00000560383 OR2T33Q8NG76 320 aa12.94□□□□□ -0.34
SNRPA1-210ENST00000560383 OR4Q3Q8NH05 313 aa12.94□□□□□ -0.34
SNRPA1-210ENST00000560383 GIPC3Q8TF64 312 aa12.94□□□□□ -0.34
SNRPA1-210ENST00000560383 SNX33Q8WV41 574 aa12.94□□□□□ -0.34
SNRPA1-210ENST00000560383 IPCEF1Q8WWN9 437 aaPredicted RBP12.94□□□□□ -0.34
SNRPA1-210ENST00000560383 RDH5Q92781 318 aa12.94□□□□□ -0.34
SNRPA1-210ENST00000560383 DCLRE1CQ96SD1 692 aaKnown RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms