RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 C3orf49Q96BT1 292 aa12.27□□□□□ -0.45
TRAF3-208ENST00000560371 SLAMF6Q96DU3 332 aa12.27□□□□□ -0.45
TRAF3-208ENST00000560371 GINS3Q9BRX5 216 aa12.27□□□□□ -0.45
TRAF3-208ENST00000560371 MOB1AQ9H8S9 216 aa12.27□□□□□ -0.45
TRAF3-208ENST00000560371 RAB5BP61020 215 aa12.26□□□□□ -0.45
TRAF3-208ENST00000560371 BEX5Q5H9J7 111 aa12.26□□□□□ -0.45
TRAF3-208ENST00000560371 Q7L0L9 218 aa12.26□□□□□ -0.45
TRAF3-208ENST00000560371 TRILQ7L0X0 811 aa12.26□□□□□ -0.45
TRAF3-208ENST00000560371 OR52N1Q8NH53 320 aa12.26□□□□□ -0.45
TRAF3-208ENST00000560371 OR51F2Q8NH61 342 aa12.26□□□□□ -0.45
TRAF3-208ENST00000560371 C17orf112F2Z3M2 114 aa12.26□□□□□ -0.45
TRAF3-208ENST00000560371 MRPL19P49406 292 aaKnown RBP12.26□□□□□ -0.45
TRAF3-208ENST00000560371 RAP2BP61225 183 aa12.26□□□□□ -0.45
TRAF3-208ENST00000560371 RPL18Q07020 188 aaKnown RBP12.26□□□□□ -0.45
TRAF3-208ENST00000560371 ZNF74Q16587 644 aa12.26□□□□□ -0.45
TRAF3-208ENST00000560371 PHLDA2Q53GA4 152 aa12.26□□□□□ -0.45
TRAF3-208ENST00000560371 OGFOD3Q6PK18 319 aa12.26□□□□□ -0.45
TRAF3-208ENST00000560371 TMEM43Q9BTV4 400 aa12.26□□□□□ -0.45
TRAF3-208ENST00000560371 PLEKHF2Q9H8W4 249 aa12.26□□□□□ -0.45
TRAF3-208ENST00000560371 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.26□□□□□ -0.45
TRAF3-208ENST00000560371 HMX2A2RU54 273 aa12.26□□□□□ -0.45
TRAF3-208ENST00000560371 M0R296 226 aa12.26□□□□□ -0.45
TRAF3-208ENST00000560371 UPK1AO00322 258 aa12.26□□□□□ -0.45
TRAF3-208ENST00000560371 GLAP06280 429 aa12.26□□□□□ -0.45
TRAF3-208ENST00000560371 ASTLQ6HA08 431 aaPredicted RBP12.26□□□□□ -0.45
TRAF3-208ENST00000560371 LSRQ86X29 649 aaPredicted RBP12.26□□□□□ -0.45
TRAF3-208ENST00000560371 LAX1Q8IWV1 398 aa12.26□□□□□ -0.45
TRAF3-208ENST00000560371 OR51D1Q8NGF3 324 aa12.26□□□□□ -0.45
TRAF3-208ENST00000560371 GATA6Q92908 595 aa12.26□□□□□ -0.45
TRAF3-208ENST00000560371 TCEAL2Q9H3H9 227 aaPredicted RBP12.26□□□□□ -0.45
TRAF3-208ENST00000560371 BANF2Q9H503 90 aa12.26□□□□□ -0.45
TRAF3-208ENST00000560371 BCO1Q9HAY6 547 aa12.26□□□□□ -0.45
TRAF3-208ENST00000560371 GPATCH2Q9NW75 528 aa12.26□□□□□ -0.45
TRAF3-208ENST00000560371 NOTCH3Q9UM47 2321 aa12.26□□□□□ -0.45
TRAF3-208ENST00000560371 CXorf51AA0A1B0GTR3 108 aa12.26□□□□□ -0.45
TRAF3-208ENST00000560371 CT45A6P0DMU7 189 aa12.26□□□□□ -0.45
TRAF3-208ENST00000560371 CT45A5P0DMU8 189 aa12.26□□□□□ -0.45
TRAF3-208ENST00000560371 CT45A7P0DMV0 189 aa12.26□□□□□ -0.45
TRAF3-208ENST00000560371 CT45A8P0DMV1 189 aa12.26□□□□□ -0.45
TRAF3-208ENST00000560371 CT45A9P0DMV2 189 aa12.26□□□□□ -0.45
TRAF3-208ENST00000560371 GDNFP39905 211 aa12.26□□□□□ -0.45
TRAF3-208ENST00000560371 SNRPGP62308 76 aaKnown RBP12.26□□□□□ -0.45
TRAF3-208ENST00000560371 CT45A2Q5DJT8 189 aa12.26□□□□□ -0.45
TRAF3-208ENST00000560371 CT45A1Q5HYN5 189 aa12.26□□□□□ -0.45
TRAF3-208ENST00000560371 KIAA1958Q8N8K9 716 aa12.26□□□□□ -0.45
TRAF3-208ENST00000560371 CT45A3Q8NHU0 189 aa12.26□□□□□ -0.45
TRAF3-208ENST00000560371 HAS2Q92819 552 aa12.26□□□□□ -0.45
TRAF3-208ENST00000560371 OR2M2Q96R28 347 aa12.26□□□□□ -0.45
TRAF3-208ENST00000560371 PRICKLE3O43900 615 aaPredicted RBP12.26□□□□□ -0.45
TRAF3-208ENST00000560371 MT-CO3P00414 261 aa12.26□□□□□ -0.45
TRAF3-208ENST00000560371 PIGAP37287 484 aa12.26□□□□□ -0.45
TRAF3-208ENST00000560371 THBS3P49746 956 aa12.26□□□□□ -0.45
TRAF3-208ENST00000560371 TMEM81Q6P7N7 255 aa12.26□□□□□ -0.45
TRAF3-208ENST00000560371 SUMF2Q8NBJ7 301 aa12.26□□□□□ -0.45
TRAF3-208ENST00000560371 RPL3LQ92901 407 aaKnown RBP12.26□□□□□ -0.45
TRAF3-208ENST00000560371 LRP5O75197 1615 aa12.26□□□□□ -0.45
TRAF3-208ENST00000560371 CHRM2P08172 466 aa12.26□□□□□ -0.45
TRAF3-208ENST00000560371 GLRA1P23415 457 aa12.26□□□□□ -0.45
TRAF3-208ENST00000560371 DSCR4P56555 118 aaPredicted RBP12.26□□□□□ -0.45
TRAF3-208ENST00000560371 TLE1Q04724 770 aa12.26□□□□□ -0.45
TRAF3-208ENST00000560371 WDR88Q6ZMY6 472 aa12.26□□□□□ -0.45
TRAF3-208ENST00000560371 USP51Q70EK9 711 aa12.26□□□□□ -0.45
TRAF3-208ENST00000560371 SPRED1Q7Z699 444 aa12.26□□□□□ -0.45
TRAF3-208ENST00000560371 CPNE4Q96A23 557 aaPredicted RBP12.26□□□□□ -0.45
TRAF3-208ENST00000560371 GPR173Q9NS66 373 aa12.26□□□□□ -0.45
TRAF3-208ENST00000560371 SERGEFQ9UGK8 458 aa12.26□□□□□ -0.45
TRAF3-208ENST00000560371 KIR2DS1A0A191URI9 304 aa12.25□□□□□ -0.45
TRAF3-208ENST00000560371 BOLA2-SMG1P6H3BVE0 249 aa12.25□□□□□ -0.45
TRAF3-208ENST00000560371 HSD17B6O14756 317 aa12.25□□□□□ -0.45
TRAF3-208ENST00000560371 FCMRO60667 390 aa12.25□□□□□ -0.45
TRAF3-208ENST00000560371 UBL3O95164 117 aa12.25□□□□□ -0.45
TRAF3-208ENST00000560371 KIR2DS4P43632 304 aa12.25□□□□□ -0.45
TRAF3-208ENST00000560371 KIR2DS1Q14954 304 aa12.25□□□□□ -0.45
TRAF3-208ENST00000560371 TFAP2EQ6VUC0 442 aa12.25□□□□□ -0.45
TRAF3-208ENST00000560371 PRSS35Q8N3Z0 413 aa12.25□□□□□ -0.45
TRAF3-208ENST00000560371 SUCNR1Q9BXA5 334 aa12.25□□□□□ -0.45
TRAF3-208ENST00000560371 GALNT9Q9HCQ5 603 aa12.25□□□□□ -0.45
TRAF3-208ENST00000560371 ACER3Q9NUN7 267 aa12.25□□□□□ -0.45
TRAF3-208ENST00000560371 CGGBP1Q9UFW8 167 aaPredicted RBP12.25□□□□□ -0.45
TRAF3-208ENST00000560371 ROS1P08922 2347 aa12.25□□□□□ -0.45
TRAF3-208ENST00000560371 OR2W5A6NFC9 320 aa12.25□□□□□ -0.45
TRAF3-208ENST00000560371 MGST1P10620 155 aaKnown RBP12.25□□□□□ -0.45
TRAF3-208ENST00000560371 RPA2P15927 270 aa12.25□□□□□ -0.45
TRAF3-208ENST00000560371 MRPS34P82930 218 aaKnown RBP12.25□□□□□ -0.45
TRAF3-208ENST00000560371 HNF4GQ14541 408 aa12.25□□□□□ -0.45
TRAF3-208ENST00000560371 ZNF628Q5EBL2 1059 aa12.25□□□□□ -0.45
TRAF3-208ENST00000560371 CYHR1Q6ZMK1 362 aa12.25□□□□□ -0.45
TRAF3-208ENST00000560371 GMDSO60547 372 aa12.25□□□□□ -0.45
TRAF3-208ENST00000560371 NRASP01111 189 aa12.25□□□□□ -0.45
TRAF3-208ENST00000560371 PLA2G7Q13093 441 aa12.25□□□□□ -0.45
TRAF3-208ENST00000560371 PEA15Q15121 130 aa12.25□□□□□ -0.45
TRAF3-208ENST00000560371 ATF6BQ99941 703 aa12.25□□□□□ -0.45
TRAF3-208ENST00000560371 ABCD4O14678 606 aa12.25□□□□□ -0.45
TRAF3-208ENST00000560371 APEHP13798 732 aaKnown RBP12.25□□□□□ -0.45
TRAF3-208ENST00000560371 METAP1P53582 386 aa12.25□□□□□ -0.45
TRAF3-208ENST00000560371 ZNF766Q5HY98 468 aa12.25□□□□□ -0.45
TRAF3-208ENST00000560371 C1orf53Q5VUE5 145 aa12.25□□□□□ -0.45
TRAF3-208ENST00000560371 NANPQ8TBE9 248 aa12.25□□□□□ -0.45
TRAF3-208ENST00000560371 CA5BP1Q8WTZ4 195 aa12.25□□□□□ -0.45
TRAF3-208ENST00000560371 MZB1Q8WU39 189 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 134.7 ms