RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 CDONQ4KMG0 1287 aa8.16□□□□□ -1.1
HERC1-206ENST00000559996 OR2G6Q5TZ20 316 aa8.16□□□□□ -1.1
HERC1-206ENST00000559996 XAF1Q6GPH4 301 aa8.16□□□□□ -1.1
HERC1-206ENST00000559996 OR7E24Q6IFN5 339 aa8.16□□□□□ -1.1
HERC1-206ENST00000559996 MTFR2Q6P444 385 aa8.16□□□□□ -1.1
HERC1-206ENST00000559996 XKRXQ6PP77 449 aa8.16□□□□□ -1.1
HERC1-206ENST00000559996 RHOUQ7L0Q8 258 aa8.16□□□□□ -1.1
HERC1-206ENST00000559996 VASH1Q7L8A9 365 aaPredicted RBP8.16□□□□□ -1.1
HERC1-206ENST00000559996 SLC16A14Q7RTX9 510 aa8.16□□□□□ -1.1
HERC1-206ENST00000559996 PRSS45Q7RTY3 260 aa8.16□□□□□ -1.1
HERC1-206ENST00000559996 NAA40Q86UY6 237 aa8.16□□□□□ -1.1
HERC1-206ENST00000559996 ZNF808Q8N4W9 903 aaPredicted RBP8.16□□□□□ -1.1
HERC1-206ENST00000559996 ACBD4Q8NC06 268 aa8.16□□□□□ -1.1
HERC1-206ENST00000559996 AKR7LQ8NHP1 331 aa8.16□□□□□ -1.1
HERC1-206ENST00000559996 THEM6Q8WUY1 208 aa8.16□□□□□ -1.1
HERC1-206ENST00000559996 S100PBPQ96BU1 408 aa8.16□□□□□ -1.1
HERC1-206ENST00000559996 ITPKCQ96DU7 683 aa8.16□□□□□ -1.1
HERC1-206ENST00000559996 WFIKKN1Q96NZ8 548 aa8.16□□□□□ -1.1
HERC1-206ENST00000559996 OR5M11Q96RB7 305 aa8.16□□□□□ -1.1
HERC1-206ENST00000559996 MNTQ99583 582 aa8.16□□□□□ -1.1
HERC1-206ENST00000559996 WACQ9BTA9 647 aa8.16□□□□□ -1.1
HERC1-206ENST00000559996 OR2H1Q9GZK4 316 aa8.16□□□□□ -1.1
HERC1-206ENST00000559996 OR10A4Q9H209 315 aa8.16□□□□□ -1.1
HERC1-206ENST00000559996 COQ3Q9NZJ6 369 aa8.16□□□□□ -1.1
HERC1-206ENST00000559996 CRNNQ9UBG3 495 aaPredicted RBP8.16□□□□□ -1.1
HERC1-206ENST00000559996 TIMM10BQ9Y5J6 103 aa8.16□□□□□ -1.1
HERC1-206ENST00000559996 LOC100509620A0A075B734 347 aa8.15□□□□□ -1.1
HERC1-206ENST00000559996 DAPL1A0PJW8 107 aa8.15□□□□□ -1.1
HERC1-206ENST00000559996 CIB4A0PJX0 185 aa8.15□□□□□ -1.1
HERC1-206ENST00000559996 C5orf63A6NC05 138 aa8.15□□□□□ -1.1
HERC1-206ENST00000559996 OR6C6A6NF89 314 aa8.15□□□□□ -1.1
HERC1-206ENST00000559996 EIF4E1BA6NMX2 242 aaKnown RBP8.15□□□□□ -1.1
HERC1-206ENST00000559996 FAM90A27PA6NNH2 459 aa8.15□□□□□ -1.1
HERC1-206ENST00000559996 E9PI62 339 aa8.15□□□□□ -1.1
HERC1-206ENST00000559996 C16orf97H3BN30 126 aa8.15□□□□□ -1.1
HERC1-206ENST00000559996 C19orf84I3L1E1 186 aa8.15□□□□□ -1.1
HERC1-206ENST00000559996 PSMD9O00233 223 aa8.15□□□□□ -1.1
HERC1-206ENST00000559996 RGS10O43665 173 aa8.15□□□□□ -1.1
HERC1-206ENST00000559996 CLDN14O95500 239 aa8.15□□□□□ -1.1
HERC1-206ENST00000559996 PNPP00491 289 aa8.15□□□□□ -1.1
HERC1-206ENST00000559996 PTHP01270 115 aa8.15□□□□□ -1.1
HERC1-206ENST00000559996 IGKV3-15P01624 115 aa8.15□□□□□ -1.1
HERC1-206ENST00000559996 IGLV1-44P01699 117 aa8.15□□□□□ -1.1
HERC1-206ENST00000559996 CELA3BP08861 270 aa8.15□□□□□ -1.1
HERC1-206ENST00000559996 RPSAP08865 295 aaKnown RBP8.15□□□□□ -1.1
HERC1-206ENST00000559996 SPARCP09486 303 aa8.15□□□□□ -1.1
HERC1-206ENST00000559996 CBR1P16152 277 aa8.15□□□□□ -1.1
HERC1-206ENST00000559996 TGFBR3Q03167 851 aa8.15□□□□□ -1.1
HERC1-206ENST00000559996 SNTB1Q13884 538 aaKnown RBP8.15□□□□□ -1.1
HERC1-206ENST00000559996 TAB1Q15750 504 aa8.15□□□□□ -1.1
HERC1-206ENST00000559996 TIMM23BQ5SRD1 257 aa8.15□□□□□ -1.1
HERC1-206ENST00000559996 ZNF774Q6NX45 483 aa8.15□□□□□ -1.1
HERC1-206ENST00000559996 ZNF773Q6PK81 442 aa8.15□□□□□ -1.1
HERC1-206ENST00000559996 ZNF322Q6U7Q0 402 aaPredicted RBP8.15□□□□□ -1.1
HERC1-206ENST00000559996 MDP1Q86V88 176 aa8.15□□□□□ -1.1
HERC1-206ENST00000559996 EGFL6Q8IUX8 553 aa8.15□□□□□ -1.1
HERC1-206ENST00000559996 CCDC36Q8IYA8 594 aa8.15□□□□□ -1.1
HERC1-206ENST00000559996 ZNF679Q8IYX0 411 aa8.15□□□□□ -1.1
HERC1-206ENST00000559996 STX19Q8N4C7 294 aa8.15□□□□□ -1.1
HERC1-206ENST00000559996 C17orf78Q8N4C9 275 aa8.15□□□□□ -1.1
HERC1-206ENST00000559996 GJC3Q8NFK1 279 aa8.15□□□□□ -1.1
HERC1-206ENST00000559996 OR10H4Q8NGA5 316 aa8.15□□□□□ -1.1
HERC1-206ENST00000559996 OR10H5Q8NGA6 315 aa8.15□□□□□ -1.1
HERC1-206ENST00000559996 OR52N5Q8NH56 324 aa8.15□□□□□ -1.1
HERC1-206ENST00000559996 SLC7A6Q92536 515 aa8.15□□□□□ -1.1
HERC1-206ENST00000559996 RNASE6Q93091 150 aaKnown RBP8.15□□□□□ -1.1
HERC1-206ENST00000559996 MYDGFQ969H8 173 aa8.15□□□□□ -1.1
HERC1-206ENST00000559996 PPP1R14AQ96A00 147 aa8.15□□□□□ -1.1
HERC1-206ENST00000559996 SLAMF6Q96DU3 332 aa8.15□□□□□ -1.1
HERC1-206ENST00000559996 POM121L2Q96KW2 1035 aa8.15□□□□□ -1.1
HERC1-206ENST00000559996 OR8B4Q96RC9 309 aa8.15□□□□□ -1.1
HERC1-206ENST00000559996 CDADC1Q9BWV3 514 aa8.15□□□□□ -1.1
HERC1-206ENST00000559996 TTTY10Q9BZA0 68 aa8.15□□□□□ -1.1
HERC1-206ENST00000559996 C1orf198Q9H425 327 aa8.15□□□□□ -1.1
HERC1-206ENST00000559996 ACOT13Q9NPJ3 140 aa8.15□□□□□ -1.1
HERC1-206ENST00000559996 INPP5EQ9NRR6 644 aa8.15□□□□□ -1.1
HERC1-206ENST00000559996 DDX28Q9NUL7 540 aaKnown RBP8.15□□□□□ -1.1
HERC1-206ENST00000559996 NPAP1Q9NZP6 1156 aa8.15□□□□□ -1.1
HERC1-206ENST00000559996 ZNF319Q9P2F9 582 aa8.15□□□□□ -1.1
HERC1-206ENST00000559996 EXOSC1Q9Y3B2 195 aaKnown RBP8.15□□□□□ -1.1
HERC1-206ENST00000559996 SIRT4Q9Y6E7 314 aaPredicted RBP8.15□□□□□ -1.1
HERC1-206ENST00000559996 TMEM129A0AVI4 362 aa8.14□□□□□ -1.11
HERC1-206ENST00000559996 IRGMA1A4Y4 181 aa8.14□□□□□ -1.11
HERC1-206ENST00000559996 MAGEA13PA6NCF6 341 aa8.14□□□□□ -1.11
HERC1-206ENST00000559996 ZNF670-ZNF695F2Z2N8 137 aa8.14□□□□□ -1.11
HERC1-206ENST00000559996 SGCEO43556 437 aa8.14□□□□□ -1.11
HERC1-206ENST00000559996 TMCC2O75069 709 aa8.14□□□□□ -1.11
HERC1-206ENST00000559996 FARS2O95363 451 aaKnown RBP8.14□□□□□ -1.11
HERC1-206ENST00000559996 F12P00748 615 aaPredicted RBP8.14□□□□□ -1.11
HERC1-206ENST00000559996 TFAP2AP05549 437 aa8.14□□□□□ -1.11
HERC1-206ENST00000559996 LCKP06239 509 aa8.14□□□□□ -1.11
HERC1-206ENST00000559996 DBHP09172 617 aa8.14□□□□□ -1.11
HERC1-206ENST00000559996 IGFBP2P18065 325 aa8.14□□□□□ -1.11
HERC1-206ENST00000559996 ATP6V1E1P36543 226 aa8.14□□□□□ -1.11
HERC1-206ENST00000559996 GUCA1AP43080 201 aaPredicted RBP8.14□□□□□ -1.11
HERC1-206ENST00000559996 EGR3Q06889 387 aa8.14□□□□□ -1.11
HERC1-206ENST00000559996 RAB39AQ14964 217 aa8.14□□□□□ -1.11
HERC1-206ENST00000559996 TP53I3Q53FA7 332 aa8.14□□□□□ -1.11
HERC1-206ENST00000559996 PABPC1L2AQ5JQF8 200 aa8.14□□□□□ -1.11
HERC1-206ENST00000559996 ELFN2Q5R3F8 820 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms