RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 ISG20L2Q9H9L3 353 aaKnown RBP4.56□□□□□ -1.68
SPG11-220ENST00000559933 TMEM38BQ9NVV0 291 aa4.56□□□□□ -1.68
SPG11-220ENST00000559933 ZNF224Q9NZL3 707 aa4.56□□□□□ -1.68
SPG11-220ENST00000559933 H2AFY2Q9P0M6 372 aaPredicted RBP4.56□□□□□ -1.68
SPG11-220ENST00000559933 UPB1Q9UBR1 384 aa4.56□□□□□ -1.68
SPG11-220ENST00000559933 PROCRQ9UNN8 238 aa4.56□□□□□ -1.68
SPG11-220ENST00000559933 GRIP1Q9Y3R0 1128 aa4.56□□□□□ -1.68
SPG11-220ENST00000559933 FKBP7Q9Y680 259 aa4.56□□□□□ -1.68
SPG11-220ENST00000559933 LHFPL6Q9Y693 200 aa4.56□□□□□ -1.68
SPG11-220ENST00000559933 HSPE1-MOB4S4R3N1 261 aa4.56□□□□□ -1.68
SPG11-220ENST00000559933 POLEQ07864 2286 aa4.55□□□□□ -1.68
SPG11-220ENST00000559933 C5orf63A6NC05 138 aa4.55□□□□□ -1.68
SPG11-220ENST00000559933 ZNF99A8MXY4 864 aaPredicted RBP4.55□□□□□ -1.68
SPG11-220ENST00000559933 E9PI62 339 aa4.55□□□□□ -1.68
SPG11-220ENST00000559933 E9PLN8 166 aa4.55□□□□□ -1.68
SPG11-220ENST00000559933 H3BSH0 61 aa4.55□□□□□ -1.68
SPG11-220ENST00000559933 J3QRE1 110 aa4.55□□□□□ -1.68
SPG11-220ENST00000559933 ZNF593O00488 134 aaPredicted RBP4.55□□□□□ -1.68
SPG11-220ENST00000559933 RGS10O43665 173 aa4.55□□□□□ -1.68
SPG11-220ENST00000559933 MPZL2O60487 215 aa4.55□□□□□ -1.68
SPG11-220ENST00000559933 ZG16O60844 167 aa4.55□□□□□ -1.68
SPG11-220ENST00000559933 AGFG2O95081 481 aa4.55□□□□□ -1.68
SPG11-220ENST00000559933 RAB36O95755 333 aa4.55□□□□□ -1.68
SPG11-220ENST00000559933 LALBAP00709 142 aa4.55□□□□□ -1.68
SPG11-220ENST00000559933 PTHP01270 115 aa4.55□□□□□ -1.68
SPG11-220ENST00000559933 HLA-HP01893 362 aa4.55□□□□□ -1.68
SPG11-220ENST00000559933 CDK1P06493 297 aa4.55□□□□□ -1.68
SPG11-220ENST00000559933 CELA3BP08861 270 aa4.55□□□□□ -1.68
SPG11-220ENST00000559933 SBK2P0C263 348 aa4.55□□□□□ -1.68
SPG11-220ENST00000559933 LIMS3P0CW19 117 aa4.55□□□□□ -1.68
SPG11-220ENST00000559933 LIMS4P0CW20 117 aa4.55□□□□□ -1.68
SPG11-220ENST00000559933 OR8G3PP0DMU2 310 aa4.55□□□□□ -1.68
SPG11-220ENST00000559933 CCL2P13500 99 aa4.55□□□□□ -1.68
SPG11-220ENST00000559933 MSR1P21757 451 aa4.55□□□□□ -1.68
SPG11-220ENST00000559933 CRABP1P29762 137 aa4.55□□□□□ -1.68
SPG11-220ENST00000559933 PTGER4P35408 488 aa4.55□□□□□ -1.68
SPG11-220ENST00000559933 TIMP3P35625 211 aa4.55□□□□□ -1.68
SPG11-220ENST00000559933 ATP6V1E1P36543 226 aa4.55□□□□□ -1.68
SPG11-220ENST00000559933 PSMB10P40306 273 aa4.55□□□□□ -1.68
SPG11-220ENST00000559933 CAPZA2P47755 286 aa4.55□□□□□ -1.68
SPG11-220ENST00000559933 ENTPD1P49961 510 aa4.55□□□□□ -1.68
SPG11-220ENST00000559933 ZNF84P51523 738 aa4.55□□□□□ -1.68
SPG11-220ENST00000559933 ZNF133P52736 654 aaPredicted RBP4.55□□□□□ -1.68
SPG11-220ENST00000559933 CXCR4P61073 352 aa4.55□□□□□ -1.68
SPG11-220ENST00000559933 SLC35A2P78381 396 aa4.55□□□□□ -1.68
SPG11-220ENST00000559933 HGFACQ04756 655 aa4.55□□□□□ -1.68
SPG11-220ENST00000559933 MFGE8Q08431 387 aaPredicted RBP4.55□□□□□ -1.68
SPG11-220ENST00000559933 FAM27E3Q08E93 113 aa4.55□□□□□ -1.68
SPG11-220ENST00000559933 ST3GAL4Q11206 333 aa4.55□□□□□ -1.68
SPG11-220ENST00000559933 EIF2B1Q14232 305 aaKnown RBP4.55□□□□□ -1.68
SPG11-220ENST00000559933 GGTLC2Q14390 218 aa4.55□□□□□ -1.68
SPG11-220ENST00000559933 STK11Q15831 433 aa4.55□□□□□ -1.68
SPG11-220ENST00000559933 NEDD8Q15843 81 aa4.55□□□□□ -1.68
SPG11-220ENST00000559933 TP53I3Q53FA7 332 aa4.55□□□□□ -1.68
SPG11-220ENST00000559933 SLC35D3Q5M8T2 416 aa4.55□□□□□ -1.68
SPG11-220ENST00000559933 RBM48Q5RL73 367 aaKnown RBP4.55□□□□□ -1.68
SPG11-220ENST00000559933 SLC25A30Q5SVS4 291 aa4.55□□□□□ -1.68
SPG11-220ENST00000559933 THEM4Q5T1C6 240 aa4.55□□□□□ -1.68
SPG11-220ENST00000559933 LCN1P1Q5VSP4 162 aa4.55□□□□□ -1.68
SPG11-220ENST00000559933 MEDAGQ5VYS4 303 aa4.55□□□□□ -1.68
SPG11-220ENST00000559933 FBXW9Q5XUX1 488 aa4.55□□□□□ -1.68
SPG11-220ENST00000559933 OR2A2Q6IF42 318 aa4.55□□□□□ -1.68
SPG11-220ENST00000559933 OR7E24Q6IFN5 339 aa4.55□□□□□ -1.68
SPG11-220ENST00000559933 ZNF774Q6NX45 483 aa4.55□□□□□ -1.68
SPG11-220ENST00000559933 DNM1P34Q6PK57 102 aa4.55□□□□□ -1.68
SPG11-220ENST00000559933 ZNF773Q6PK81 442 aa4.55□□□□□ -1.68
SPG11-220ENST00000559933 LRRN1Q6UXK5 716 aa4.55□□□□□ -1.68
SPG11-220ENST00000559933 ZNF813Q6ZN06 617 aa4.55□□□□□ -1.68
SPG11-220ENST00000559933 FOXL2NBQ6ZUU3 175 aa4.55□□□□□ -1.68
SPG11-220ENST00000559933 HDDC2Q7Z4H3 204 aa4.55□□□□□ -1.68
SPG11-220ENST00000559933 DCXRQ7Z4W1 244 aa4.55□□□□□ -1.68
SPG11-220ENST00000559933 LHFPL3Q86UP9 236 aa4.55□□□□□ -1.68
SPG11-220ENST00000559933 CDC20BQ86Y33 519 aa4.55□□□□□ -1.68
SPG11-220ENST00000559933 GLB1L2Q8IW92 636 aa4.55□□□□□ -1.68
SPG11-220ENST00000559933 SKA3Q8IX90 412 aa4.55□□□□□ -1.68
SPG11-220ENST00000559933 STX19Q8N4C7 294 aa4.55□□□□□ -1.68
SPG11-220ENST00000559933 SLC22A24Q8N4F4 322 aa4.55□□□□□ -1.68
SPG11-220ENST00000559933 SYT8Q8NBV8 401 aa4.55□□□□□ -1.68
SPG11-220ENST00000559933 OR1K1Q8NGR3 316 aa4.55□□□□□ -1.68
SPG11-220ENST00000559933 OR52N5Q8NH56 324 aa4.55□□□□□ -1.68
SPG11-220ENST00000559933 AKR7LQ8NHP1 331 aa4.55□□□□□ -1.68
SPG11-220ENST00000559933 THEM6Q8WUY1 208 aa4.55□□□□□ -1.68
SPG11-220ENST00000559933 TRUB1Q8WWH5 349 aaKnown RBP4.55□□□□□ -1.68
SPG11-220ENST00000559933 HSD17B8Q92506 261 aa4.55□□□□□ -1.68
SPG11-220ENST00000559933 SLC7A6Q92536 515 aa4.55□□□□□ -1.68
SPG11-220ENST00000559933 RND1Q92730 232 aa4.55□□□□□ -1.68
SPG11-220ENST00000559933 FBXO17Q96EF6 278 aa4.55□□□□□ -1.68
SPG11-220ENST00000559933 C4orf36Q96KX1 117 aa4.55□□□□□ -1.68
SPG11-220ENST00000559933 RBP7Q96R05 134 aa4.55□□□□□ -1.68
SPG11-220ENST00000559933 OR5M11Q96RB7 305 aa4.55□□□□□ -1.68
SPG11-220ENST00000559933 SNX18Q96RF0 628 aa4.55□□□□□ -1.68
SPG11-220ENST00000559933 SIGLEC11Q96RL6 698 aa4.55□□□□□ -1.68
SPG11-220ENST00000559933 INTS14Q96SY0 518 aa4.55□□□□□ -1.68
SPG11-220ENST00000559933 VKORC1Q9BQB6 163 aa4.55□□□□□ -1.68
SPG11-220ENST00000559933 ZNF649Q9BS31 505 aa4.55□□□□□ -1.68
SPG11-220ENST00000559933 SFXN3Q9BWM7 321 aa4.55□□□□□ -1.68
SPG11-220ENST00000559933 LINC00470Q9BZP3 86 aa4.55□□□□□ -1.68
SPG11-220ENST00000559933 WNT5BQ9H1J7 359 aa4.55□□□□□ -1.68
SPG11-220ENST00000559933 ZNF696Q9H7X3 374 aa4.55□□□□□ -1.68
SPG11-220ENST00000559933 PNRC2Q9NPJ4 139 aaKnown RBP4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms