RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 RAB3DO95716 219 aa8.96□□□□□ -0.98
LRRC28-216ENST00000559819 ACHEP22303 614 aa8.96□□□□□ -0.98
LRRC28-216ENST00000559819 AFF3P51826 1226 aaKnown RBP8.96□□□□□ -0.98
LRRC28-216ENST00000559819 C17orf67Q0P5P2 114 aa8.96□□□□□ -0.98
LRRC28-216ENST00000559819 IKZF1Q13422 519 aa8.96□□□□□ -0.98
LRRC28-216ENST00000559819 NKAIN1Q4KMZ8 207 aa8.96□□□□□ -0.98
LRRC28-216ENST00000559819 LCN10Q6JVE6 187 aa8.96□□□□□ -0.98
LRRC28-216ENST00000559819 RHBDD2Q6NTF9 364 aa8.96□□□□□ -0.98
LRRC28-216ENST00000559819 RNF144BQ7Z419 303 aa8.96□□□□□ -0.98
LRRC28-216ENST00000559819 OR4S1Q8NGB4 309 aa8.96□□□□□ -0.98
LRRC28-216ENST00000559819 OR6M1Q8NGM8 313 aa8.96□□□□□ -0.98
LRRC28-216ENST00000559819 MFSD8Q8NHS3 518 aa8.96□□□□□ -0.98
LRRC28-216ENST00000559819 TNFAIP8L1Q8WVP5 186 aa8.96□□□□□ -0.98
LRRC28-216ENST00000559819 ST8SIA1Q92185 356 aa8.96□□□□□ -0.98
LRRC28-216ENST00000559819 B3GNT4Q9C0J1 378 aa8.96□□□□□ -0.98
LRRC28-216ENST00000559819 SLC17A5Q9NRA2 495 aa8.96□□□□□ -0.98
LRRC28-216ENST00000559819 COQ3Q9NZJ6 369 aa8.96□□□□□ -0.98
LRRC28-216ENST00000559819 FBXO4Q9UKT5 387 aa8.96□□□□□ -0.98
LRRC28-216ENST00000559819 ADAMTS20P59510 1910 aa8.96□□□□□ -0.98
LRRC28-216ENST00000559819 A6NIZ1 184 aa8.96□□□□□ -0.98
LRRC28-216ENST00000559819 POM121CA8CG34 1229 aa8.96□□□□□ -0.98
LRRC28-216ENST00000559819 LDLRAD4O15165 306 aa8.96□□□□□ -0.98
LRRC28-216ENST00000559819 AMY2AP04746 511 aa8.96□□□□□ -0.98
LRRC28-216ENST00000559819 LPLP06858 475 aa8.96□□□□□ -0.98
LRRC28-216ENST00000559819 ACSM4P0C7M7 580 aa8.96□□□□□ -0.98
LRRC28-216ENST00000559819 GABRA1P14867 456 aa8.96□□□□□ -0.98
LRRC28-216ENST00000559819 FOSL2P15408 326 aa8.96□□□□□ -0.98
LRRC28-216ENST00000559819 ANOS1P23352 680 aa8.96□□□□□ -0.98
LRRC28-216ENST00000559819 DAP3P51398 398 aaKnown RBP8.96□□□□□ -0.98
LRRC28-216ENST00000559819 AP2S1P53680 142 aaPredicted RBP8.96□□□□□ -0.98
LRRC28-216ENST00000559819 RAB14P61106 215 aa8.96□□□□□ -0.98
LRRC28-216ENST00000559819 RAP1BP61224 184 aa8.96□□□□□ -0.98
LRRC28-216ENST00000559819 SEC61A1P61619 476 aaKnown RBP8.96□□□□□ -0.98
LRRC28-216ENST00000559819 RAP1AP62834 184 aa8.96□□□□□ -0.98
LRRC28-216ENST00000559819 ZP4Q12836 540 aa8.96□□□□□ -0.98
LRRC28-216ENST00000559819 HLXQ14774 488 aaPredicted RBP8.96□□□□□ -0.98
LRRC28-216ENST00000559819 NR0B2Q15466 257 aa8.96□□□□□ -0.98
LRRC28-216ENST00000559819 SIGIRRQ6IA17 410 aa8.96□□□□□ -0.98
LRRC28-216ENST00000559819 GUSBP11Q6P575 273 aa8.96□□□□□ -0.98
LRRC28-216ENST00000559819 DNM1P34Q6PK57 102 aa8.96□□□□□ -0.98
LRRC28-216ENST00000559819 WDR74Q6RFH5 385 aaPredicted RBP8.96□□□□□ -0.98
LRRC28-216ENST00000559819 C3P1Q6ZMU1 363 aa8.96□□□□□ -0.98
LRRC28-216ENST00000559819 IDO2Q6ZQW0 420 aa8.96□□□□□ -0.98
LRRC28-216ENST00000559819 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.96□□□□□ -0.98
LRRC28-216ENST00000559819 OR10S1Q8NGN2 331 aa8.96□□□□□ -0.98
LRRC28-216ENST00000559819 SUN5Q8TC36 379 aa8.96□□□□□ -0.98
LRRC28-216ENST00000559819 POC1BQ8TC44 478 aa8.96□□□□□ -0.98
LRRC28-216ENST00000559819 LRRC20Q8TCA0 184 aa8.96□□□□□ -0.98
LRRC28-216ENST00000559819 FAM46BQ96A09 425 aa8.96□□□□□ -0.98
LRRC28-216ENST00000559819 CYYR1Q96J86 154 aa8.96□□□□□ -0.98
LRRC28-216ENST00000559819 WDR77Q9BQA1 342 aaPredicted RBP8.96□□□□□ -0.98
LRRC28-216ENST00000559819 PTGES2Q9H7Z7 377 aa8.96□□□□□ -0.98
LRRC28-216ENST00000559819 FARSAQ9Y285 508 aaKnown RBP8.96□□□□□ -0.98
LRRC28-216ENST00000559819 RHBDD3Q9Y3P4 386 aa8.96□□□□□ -0.98
LRRC28-216ENST00000559819 A0A1W2PNR3 127 aa8.95□□□□□ -0.98
LRRC28-216ENST00000559819 LIPT2A6NK58 231 aa8.95□□□□□ -0.98
LRRC28-216ENST00000559819 SHOXO15266 292 aa8.95□□□□□ -0.98
LRRC28-216ENST00000559819 KLK2P20151 261 aa8.95□□□□□ -0.98
LRRC28-216ENST00000559819 GNALP38405 381 aa8.95□□□□□ -0.98
LRRC28-216ENST00000559819 APOBEC1P41238 236 aaKnown RBP8.95□□□□□ -0.98
LRRC28-216ENST00000559819 TAS2R19P59542 299 aa8.95□□□□□ -0.98
LRRC28-216ENST00000559819 SORDQ00796 357 aa8.95□□□□□ -0.98
LRRC28-216ENST00000559819 NKPD1Q17RQ9 610 aa8.95□□□□□ -0.98
LRRC28-216ENST00000559819 SCGB2B2Q4G0G5 96 aa8.95□□□□□ -0.98
LRRC28-216ENST00000559819 SLC22A6Q4U2R8 563 aa8.95□□□□□ -0.98
LRRC28-216ENST00000559819 CARD17Q5XLA6 110 aa8.95□□□□□ -0.98
LRRC28-216ENST00000559819 C11orf88Q6PI97 169 aa8.95□□□□□ -0.98
LRRC28-216ENST00000559819 TSSK4Q6SA08 328 aa8.95□□□□□ -0.98
LRRC28-216ENST00000559819 TMUB2Q71RG4 321 aa8.95□□□□□ -0.98
LRRC28-216ENST00000559819 MISPQ8IVT2 679 aa8.95□□□□□ -0.98
LRRC28-216ENST00000559819 OR10G3Q8NGC4 313 aa8.95□□□□□ -0.98
LRRC28-216ENST00000559819 DDIT4LQ96D03 193 aa8.95□□□□□ -0.98
LRRC28-216ENST00000559819 SLAMF6Q96DU3 332 aa8.95□□□□□ -0.98
LRRC28-216ENST00000559819 ADAT3Q96EY9 351 aaPredicted RBP8.95□□□□□ -0.98
LRRC28-216ENST00000559819 CXorf58Q96LI9 332 aa8.95□□□□□ -0.98
LRRC28-216ENST00000559819 SOX7Q9BT81 388 aa8.95□□□□□ -0.98
LRRC28-216ENST00000559819 GSX2Q9BZM3 304 aa8.95□□□□□ -0.98
LRRC28-216ENST00000559819 TGIF2Q9GZN2 237 aa8.95□□□□□ -0.98
LRRC28-216ENST00000559819 PCED1AQ9H1Q7 454 aa8.95□□□□□ -0.98
LRRC28-216ENST00000559819 CNTD2Q9H8S5 307 aa8.95□□□□□ -0.98
LRRC28-216ENST00000559819 ZNF224Q9NZL3 707 aa8.95□□□□□ -0.98
LRRC28-216ENST00000559819 B3GAT1Q9P2W7 334 aa8.95□□□□□ -0.98
LRRC28-216ENST00000559819 ZNF230Q9UIE0 474 aaPredicted RBP8.95□□□□□ -0.98
LRRC28-216ENST00000559819 KIF26BQ2KJY2 2108 aa8.95□□□□□ -0.98
LRRC28-216ENST00000559819 LOC100509620A0A075B734 347 aa8.95□□□□□ -0.98
LRRC28-216ENST00000559819 TEX46H3BTG2 121 aa8.95□□□□□ -0.98
LRRC28-216ENST00000559819 SCRG1O75711 98 aa8.95□□□□□ -0.98
LRRC28-216ENST00000559819 TTRP02766 147 aa8.95□□□□□ -0.98
LRRC28-216ENST00000559819 ITGB2P05107 769 aa8.95□□□□□ -0.98
LRRC28-216ENST00000559819 ZNF735P0CB33 412 aa8.95□□□□□ -0.98
LRRC28-216ENST00000559819 CDAP32320 146 aa8.95□□□□□ -0.98
LRRC28-216ENST00000559819 PTGDSP41222 190 aa8.95□□□□□ -0.98
LRRC28-216ENST00000559819 ACTBP60709 375 aa8.95□□□□□ -0.98
LRRC28-216ENST00000559819 ACTG1P63261 375 aa8.95□□□□□ -0.98
LRRC28-216ENST00000559819 MFAP5Q13361 173 aa8.95□□□□□ -0.98
LRRC28-216ENST00000559819 PCK2Q16822 640 aa8.95□□□□□ -0.98
LRRC28-216ENST00000559819 NHLRC3Q5JS37 347 aa8.95□□□□□ -0.98
LRRC28-216ENST00000559819 C5orf46Q6UWT4 87 aa8.95□□□□□ -0.98
LRRC28-216ENST00000559819 ALKAL2Q6UX46 152 aa8.95□□□□□ -0.98
LRRC28-216ENST00000559819 LYPD6Q86Y78 171 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms