RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 LIPEQ05469 1076 aa4.91□□□□□ -1.62
USP3-215ENST00000559771 APOFQ13790 326 aa4.91□□□□□ -1.62
USP3-215ENST00000559771 CYP51A1Q16850 503 aa4.91□□□□□ -1.62
USP3-215ENST00000559771 FAM98BQ52LJ0 330 aaKnown RBP4.91□□□□□ -1.62
USP3-215ENST00000559771 ARMC4Q5T2S8 1044 aa4.91□□□□□ -1.62
USP3-215ENST00000559771 RGS7BPQ6MZT1 257 aaPredicted RBP4.91□□□□□ -1.62
USP3-215ENST00000559771 FAHD2BQ6P2I3 314 aaPredicted RBP4.91□□□□□ -1.62
USP3-215ENST00000559771 C1QL2Q7Z5L3 287 aa4.91□□□□□ -1.62
USP3-215ENST00000559771 KRT73Q86Y46 540 aa4.91□□□□□ -1.62
USP3-215ENST00000559771 ARMC8Q8IUR7 673 aa4.91□□□□□ -1.62
USP3-215ENST00000559771 ZNF101Q8IZC7 436 aa4.91□□□□□ -1.62
USP3-215ENST00000559771 ADGRG5Q8IZF4 528 aa4.91□□□□□ -1.62
USP3-215ENST00000559771 C10orf53Q8N6V4 93 aa4.91□□□□□ -1.62
USP3-215ENST00000559771 RNF148Q8N7C7 305 aa4.91□□□□□ -1.62
USP3-215ENST00000559771 SYT8Q8NBV8 401 aa4.91□□□□□ -1.62
USP3-215ENST00000559771 OR51F2Q8NH61 342 aa4.91□□□□□ -1.62
USP3-215ENST00000559771 ZNF519Q8TB69 540 aa4.91□□□□□ -1.62
USP3-215ENST00000559771 SYNPRQ8TBG9 265 aa4.91□□□□□ -1.62
USP3-215ENST00000559771 CANT1Q8WVQ1 401 aa4.91□□□□□ -1.62
USP3-215ENST00000559771 LRTOMTQ8WZ04 291 aa4.91□□□□□ -1.62
USP3-215ENST00000559771 DVL3Q92997 716 aaPredicted RBP4.91□□□□□ -1.62
USP3-215ENST00000559771 MCHR2Q969V1 340 aa4.91□□□□□ -1.62
USP3-215ENST00000559771 ZNF566Q969W8 418 aa4.91□□□□□ -1.62
USP3-215ENST00000559771 FAHD2AQ96GK7 314 aa4.91□□□□□ -1.62
USP3-215ENST00000559771 MARS2Q96GW9 593 aaKnown RBP4.91□□□□□ -1.62
USP3-215ENST00000559771 POM121L2Q96KW2 1035 aa4.91□□□□□ -1.62
USP3-215ENST00000559771 C1orf147Q96MC9 270 aaPredicted RBP4.91□□□□□ -1.62
USP3-215ENST00000559771 NSMCE2Q96MF7 247 aa4.91□□□□□ -1.62
USP3-215ENST00000559771 ZNF347Q96SE7 839 aa4.91□□□□□ -1.62
USP3-215ENST00000559771 CGREF1Q99674 301 aa4.91□□□□□ -1.62
USP3-215ENST00000559771 SLC6A7Q99884 636 aa4.91□□□□□ -1.62
USP3-215ENST00000559771 SPATA5L1Q9BVQ7 753 aa4.91□□□□□ -1.62
USP3-215ENST00000559771 ZNF416Q9BWM5 594 aa4.91□□□□□ -1.62
USP3-215ENST00000559771 CACYBPQ9HB71 228 aaKnown RBP4.91□□□□□ -1.62
USP3-215ENST00000559771 B3GAT2Q9NPZ5 323 aa4.91□□□□□ -1.62
USP3-215ENST00000559771 HINT3Q9NQE9 182 aaKnown RBP4.91□□□□□ -1.62
USP3-215ENST00000559771 DCAF16Q9NXF7 216 aa4.91□□□□□ -1.62
USP3-215ENST00000559771 NKIRAS2Q9NYR9 191 aa4.91□□□□□ -1.62
USP3-215ENST00000559771 KLHL21Q9UJP4 597 aa4.91□□□□□ -1.62
USP3-215ENST00000559771 SLC7A7Q9UM01 511 aa4.91□□□□□ -1.62
USP3-215ENST00000559771 PCDHB10Q9UN67 800 aa4.91□□□□□ -1.62
USP3-215ENST00000559771 GRIP1Q9Y3R0 1128 aa4.91□□□□□ -1.62
USP3-215ENST00000559771 WIPI2Q9Y4P8 454 aa4.91□□□□□ -1.62
USP3-215ENST00000559771 A0A087WXM4 84 aa4.9□□□□□ -1.63
USP3-215ENST00000559771 IGHV1-69-2A0A0G2JMI3 117 aa4.9□□□□□ -1.63
USP3-215ENST00000559771 TCRBV5S2A0A599 114 aa4.9□□□□□ -1.63
USP3-215ENST00000559771 TRIM64CA6NLI5 447 aa4.9□□□□□ -1.63
USP3-215ENST00000559771 KPNA4O00629 521 aaPredicted RBP4.9□□□□□ -1.63
USP3-215ENST00000559771 TMPRSS2O15393 492 aa4.9□□□□□ -1.63
USP3-215ENST00000559771 RNF13O43567 381 aa4.9□□□□□ -1.63
USP3-215ENST00000559771 SERPINB7O75635 380 aa4.9□□□□□ -1.63
USP3-215ENST00000559771 TRMUO75648 421 aaKnown RBP4.9□□□□□ -1.63
USP3-215ENST00000559771 NGFP01138 241 aa4.9□□□□□ -1.63
USP3-215ENST00000559771 PF4P02776 101 aa4.9□□□□□ -1.63
USP3-215ENST00000559771 SLPIP03973 132 aa4.9□□□□□ -1.63
USP3-215ENST00000559771 TFAP2AP05549 437 aa4.9□□□□□ -1.63
USP3-215ENST00000559771 FUT1P19526 365 aa4.9□□□□□ -1.63
USP3-215ENST00000559771 ATP6V1B2P21281 511 aa4.9□□□□□ -1.63
USP3-215ENST00000559771 PPIBP23284 216 aaKnown RBP4.9□□□□□ -1.63
USP3-215ENST00000559771 MYF6P23409 242 aa4.9□□□□□ -1.63
USP3-215ENST00000559771 CDAP32320 146 aa4.9□□□□□ -1.63
USP3-215ENST00000559771 MSX2P35548 267 aaPredicted RBP4.9□□□□□ -1.63
USP3-215ENST00000559771 KLF3P57682 345 aaPredicted RBP4.9□□□□□ -1.63
USP3-215ENST00000559771 MTPNP58546 118 aa4.9□□□□□ -1.63
USP3-215ENST00000559771 ESRRGP62508 458 aa4.9□□□□□ -1.63
USP3-215ENST00000559771 MRPS34P82930 218 aaKnown RBP4.9□□□□□ -1.63
USP3-215ENST00000559771 GLO1Q04760 184 aa4.9□□□□□ -1.63
USP3-215ENST00000559771 PLP2Q04941 152 aa4.9□□□□□ -1.63
USP3-215ENST00000559771 FMODQ06828 376 aa4.9□□□□□ -1.63
USP3-215ENST00000559771 RPL18Q07020 188 aaKnown RBP4.9□□□□□ -1.63
USP3-215ENST00000559771 RBBP4Q09028 425 aa4.9□□□□□ -1.63
USP3-215ENST00000559771 FHL1Q13642 323 aa4.9□□□□□ -1.63
USP3-215ENST00000559771 TSTQ16762 297 aaKnown RBP4.9□□□□□ -1.63
USP3-215ENST00000559771 RFX4Q33E94 735 aa4.9□□□□□ -1.63
USP3-215ENST00000559771 PCGF3Q3KNV8 242 aa4.9□□□□□ -1.63
USP3-215ENST00000559771 SLC36A3Q495N2 470 aa4.9□□□□□ -1.63
USP3-215ENST00000559771 NRN1LQ496H8 165 aa4.9□□□□□ -1.63
USP3-215ENST00000559771 AWAT1Q58HT5 328 aa4.9□□□□□ -1.63
USP3-215ENST00000559771 PABPC1L2AQ5JQF8 200 aa4.9□□□□□ -1.63
USP3-215ENST00000559771 KLF17Q5JT82 389 aaPredicted RBP4.9□□□□□ -1.63
USP3-215ENST00000559771 C10orf128Q5T292 105 aa4.9□□□□□ -1.63
USP3-215ENST00000559771 GLYATQ6IB77 296 aa4.9□□□□□ -1.63
USP3-215ENST00000559771 ACSM5Q6NUN0 579 aa4.9□□□□□ -1.63
USP3-215ENST00000559771 ERICH5Q6P6B1 374 aa4.9□□□□□ -1.63
USP3-215ENST00000559771 CYP2R1Q6VVX0 501 aa4.9□□□□□ -1.63
USP3-215ENST00000559771 RFPL4BQ6ZWI9 263 aa4.9□□□□□ -1.63
USP3-215ENST00000559771 USP51Q70EK9 711 aa4.9□□□□□ -1.63
USP3-215ENST00000559771 PATL1Q86TB9 770 aaKnown RBP4.9□□□□□ -1.63
USP3-215ENST00000559771 RANBP3LQ86VV4 465 aaPredicted RBP4.9□□□□□ -1.63
USP3-215ENST00000559771 NKAIN4Q8IVV8 208 aa4.9□□□□□ -1.63
USP3-215ENST00000559771 GALNT4Q8N4A0 578 aa4.9□□□□□ -1.63
USP3-215ENST00000559771 CLDN22Q8N7P3 220 aa4.9□□□□□ -1.63
USP3-215ENST00000559771 FAM156AQ8NDB6 213 aa4.9□□□□□ -1.63
USP3-215ENST00000559771 MOSPD2Q8NHP6 518 aa4.9□□□□□ -1.63
USP3-215ENST00000559771 PFN4Q8NHR9 129 aa4.9□□□□□ -1.63
USP3-215ENST00000559771 VANGL1Q8TAA9 524 aaPredicted RBP4.9□□□□□ -1.63
USP3-215ENST00000559771 ZNF418Q8TF45 676 aaPredicted RBP4.9□□□□□ -1.63
USP3-215ENST00000559771 IPCEF1Q8WWN9 437 aaPredicted RBP4.9□□□□□ -1.63
USP3-215ENST00000559771 ASB10Q8WXI3 467 aa4.9□□□□□ -1.63
USP3-215ENST00000559771 HDAC2Q92769 488 aaKnown RBP4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms