RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 CCDC92Q53HC0 331 aaPredicted RBP9.34□□□□□ -0.91
SPG11-216ENST00000559347 CLEC12AQ5QGZ9 265 aa9.34□□□□□ -0.91
SPG11-216ENST00000559347 HIST2H3PS2Q5TEC6 136 aa9.34□□□□□ -0.91
SPG11-216ENST00000559347 CYB5R2Q6BCY4 276 aa9.34□□□□□ -0.91
SPG11-216ENST00000559347 OR2T5Q6IEZ7 315 aa9.34□□□□□ -0.91
SPG11-216ENST00000559347 TMEM154Q6P9G4 183 aa9.34□□□□□ -0.91
SPG11-216ENST00000559347 HIST2H3AQ71DI3 136 aa9.34□□□□□ -0.91
SPG11-216ENST00000559347 ZBTB46Q86UZ6 589 aa9.34□□□□□ -0.91
SPG11-216ENST00000559347 ADGRG5Q8IZF4 528 aa9.34□□□□□ -0.91
SPG11-216ENST00000559347 OR6V1Q8N148 313 aa9.34□□□□□ -0.91
SPG11-216ENST00000559347 AQP11Q8NBQ7 271 aa9.34□□□□□ -0.91
SPG11-216ENST00000559347 NPEPL1Q8NDH3 523 aa9.34□□□□□ -0.91
SPG11-216ENST00000559347 SLC26A10Q8NG04 563 aa9.34□□□□□ -0.91
SPG11-216ENST00000559347 OR2T29Q8NH02 315 aa9.34□□□□□ -0.91
SPG11-216ENST00000559347 OR4K13Q8NH42 304 aa9.34□□□□□ -0.91
SPG11-216ENST00000559347 KLF14Q8TD94 323 aaPredicted RBP9.34□□□□□ -0.91
SPG11-216ENST00000559347 SLC7A6Q92536 515 aa9.34□□□□□ -0.91
SPG11-216ENST00000559347 RDH5Q92781 318 aa9.34□□□□□ -0.91
SPG11-216ENST00000559347 YIPF5Q969M3 257 aa9.34□□□□□ -0.91
SPG11-216ENST00000559347 MSI2Q96DH6 328 aaKnown RBP9.34□□□□□ -0.91
SPG11-216ENST00000559347 LRGUKQ96M69 825 aa9.34□□□□□ -0.91
SPG11-216ENST00000559347 SOX7Q9BT81 388 aa9.34□□□□□ -0.91
SPG11-216ENST00000559347 THTPAQ9BU02 230 aa9.34□□□□□ -0.91
SPG11-216ENST00000559347 POFUT1Q9H488 388 aa9.34□□□□□ -0.91
SPG11-216ENST00000559347 REEP1Q9H902 201 aa9.34□□□□□ -0.91
SPG11-216ENST00000559347 ELOVL3Q9HB03 270 aa9.34□□□□□ -0.91
SPG11-216ENST00000559347 RPRD1BQ9NQG5 326 aaKnown RBP9.34□□□□□ -0.91
SPG11-216ENST00000559347 ZNF275Q9NSD4 429 aaPredicted RBP9.34□□□□□ -0.91
SPG11-216ENST00000559347 TBC1D23Q9NUY8 699 aa9.34□□□□□ -0.91
SPG11-216ENST00000559347 TMEM160Q9NX00 188 aa9.34□□□□□ -0.91
SPG11-216ENST00000559347 NKIRAS2Q9NYR9 191 aa9.34□□□□□ -0.91
SPG11-216ENST00000559347 IL20Q9NYY1 176 aa9.34□□□□□ -0.91
SPG11-216ENST00000559347 B9D1Q9UPM9 204 aa9.34□□□□□ -0.91
SPG11-216ENST00000559347 SAMHD1Q9Y3Z3 626 aaKnown RBP9.34□□□□□ -0.91
SPG11-216ENST00000559347 LHFPL6Q9Y693 200 aa9.34□□□□□ -0.91
SPG11-216ENST00000559347 U3KQV3 271 aa9.34□□□□□ -0.91
SPG11-216ENST00000559347 LRP5LA4QPB2 252 aa9.33□□□□□ -0.92
SPG11-216ENST00000559347 OR6C68A6NDL8 312 aa9.33□□□□□ -0.92
SPG11-216ENST00000559347 ZSCAN5BA6NJL1 495 aa9.33□□□□□ -0.92
SPG11-216ENST00000559347 RER1O15258 196 aa9.33□□□□□ -0.92
SPG11-216ENST00000559347 GASTP01350 101 aa9.33□□□□□ -0.92
SPG11-216ENST00000559347 TFP02787 698 aa9.33□□□□□ -0.92
SPG11-216ENST00000559347 MT-ND5P03915 603 aa9.33□□□□□ -0.92
SPG11-216ENST00000559347 COL8A2P25067 703 aa9.33□□□□□ -0.92
SPG11-216ENST00000559347 IL2RGP31785 369 aa9.33□□□□□ -0.92
SPG11-216ENST00000559347 CENPAP49450 140 aa9.33□□□□□ -0.92
SPG11-216ENST00000559347 ARHGDIAP52565 204 aa9.33□□□□□ -0.92
SPG11-216ENST00000559347 CHN2P52757 468 aa9.33□□□□□ -0.92
SPG11-216ENST00000559347 CCL8P80075 99 aa9.33□□□□□ -0.92
SPG11-216ENST00000559347 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.33□□□□□ -0.92
SPG11-216ENST00000559347 COX10Q12887 443 aa9.33□□□□□ -0.92
SPG11-216ENST00000559347 TRAP1Q12931 704 aaKnown RBP9.33□□□□□ -0.92
SPG11-216ENST00000559347 MOGQ16653 247 aa9.33□□□□□ -0.92
SPG11-216ENST00000559347 MICAQ29983 383 aa9.33□□□□□ -0.92
SPG11-216ENST00000559347 DNAL1Q4LDG9 190 aa9.33□□□□□ -0.92
SPG11-216ENST00000559347 FAM166AQ6J272 317 aa9.33□□□□□ -0.92
SPG11-216ENST00000559347 ARL9Q6T311 187 aa9.33□□□□□ -0.92
SPG11-216ENST00000559347 RASSF6Q6ZTQ3 369 aa9.33□□□□□ -0.92
SPG11-216ENST00000559347 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.33□□□□□ -0.92
SPG11-216ENST00000559347 HIPK1Q86Z02 1210 aa9.33□□□□□ -0.92
SPG11-216ENST00000559347 OR52E2Q8NGJ4 325 aa9.33□□□□□ -0.92
SPG11-216ENST00000559347 SLC7A6OSQ96CW6 309 aaPredicted RBP9.33□□□□□ -0.92
SPG11-216ENST00000559347 DGCR6LQ9BY27 220 aa9.33□□□□□ -0.92
SPG11-216ENST00000559347 HDHD2Q9H0R4 259 aa9.33□□□□□ -0.92
SPG11-216ENST00000559347 TBCCD1Q9NVR7 557 aa9.33□□□□□ -0.92
SPG11-216ENST00000559347 CGGBP1Q9UFW8 167 aaPredicted RBP9.33□□□□□ -0.92
SPG11-216ENST00000559347 DYSFO75923 2080 aa9.32□□□□□ -0.92
SPG11-216ENST00000559347 PLSCR5A0PG75 271 aa9.32□□□□□ -0.92
SPG11-216ENST00000559347 DHRS12A0PJE2 317 aa9.32□□□□□ -0.92
SPG11-216ENST00000559347 AQP12BA6NM10 295 aa9.32□□□□□ -0.92
SPG11-216ENST00000559347 J3QW42 95 aa9.32□□□□□ -0.92
SPG11-216ENST00000559347 GYG2O15488 501 aa9.32□□□□□ -0.92
SPG11-216ENST00000559347 SOX14O95416 240 aa9.32□□□□□ -0.92
SPG11-216ENST00000559347 CST1P01037 141 aa9.32□□□□□ -0.92
SPG11-216ENST00000559347 IGHV1-46P01743 117 aa9.32□□□□□ -0.92
SPG11-216ENST00000559347 ADH4P08319 380 aa9.32□□□□□ -0.92
SPG11-216ENST00000559347 DBHP09172 617 aa9.32□□□□□ -0.92
SPG11-216ENST00000559347 GSTM3P21266 225 aa9.32□□□□□ -0.92
SPG11-216ENST00000559347 IGFBP5P24593 272 aa9.32□□□□□ -0.92
SPG11-216ENST00000559347 GPR6P46095 362 aaPredicted RBP9.32□□□□□ -0.92
SPG11-216ENST00000559347 ZNF81P51508 661 aa9.32□□□□□ -0.92
SPG11-216ENST00000559347 FLOT2Q14254 428 aa9.32□□□□□ -0.92
SPG11-216ENST00000559347 GK3PQ14409 553 aa9.32□□□□□ -0.92
SPG11-216ENST00000559347 FAM209AQ5JX71 171 aa9.32□□□□□ -0.92
SPG11-216ENST00000559347 SLC35F1Q5T1Q4 408 aa9.32□□□□□ -0.92
SPG11-216ENST00000559347 CFAP77Q6ZQR2 320 aa9.32□□□□□ -0.92
SPG11-216ENST00000559347 AQP12AQ8IXF9 295 aa9.32□□□□□ -0.92
SPG11-216ENST00000559347 LNX2Q8N448 690 aa9.32□□□□□ -0.92
SPG11-216ENST00000559347 GJC3Q8NFK1 279 aa9.32□□□□□ -0.92
SPG11-216ENST00000559347 OR10G2Q8NGC3 310 aa9.32□□□□□ -0.92
SPG11-216ENST00000559347 OR1F12Q8NHA8 337 aa9.32□□□□□ -0.92
SPG11-216ENST00000559347 CANT1Q8WVQ1 401 aa9.32□□□□□ -0.92
SPG11-216ENST00000559347 HPS1Q92902 700 aa9.32□□□□□ -0.92
SPG11-216ENST00000559347 COQ7Q99807 217 aa9.32□□□□□ -0.92
SPG11-216ENST00000559347 NIPSNAP1Q9BPW8 284 aa9.32□□□□□ -0.92
SPG11-216ENST00000559347 SAP30LQ9HAJ7 183 aa9.32□□□□□ -0.92
SPG11-216ENST00000559347 SRA1Q9HD15 236 aaKnown RBP9.32□□□□□ -0.92
SPG11-216ENST00000559347 MRPL22Q9NWU5 206 aaKnown RBP9.32□□□□□ -0.92
SPG11-216ENST00000559347 ATRQ13535 2644 aa9.32□□□□□ -0.92
SPG11-216ENST00000559347 LOC100289279A0A1B0GTE1 492 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms