RNA–Protein interactions for RNA: ENST00000558907.5

RNF31-208, Transcript of ring finger protein 31, human

TSL 3

Gene RNF31, Length 777 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF31-208	ENST00000558907	ADH4	P08319	380 aa		13.92	□□□□□ -0.18
RNF31-208	ENST00000558907	SLC6A6	P31641	620 aa		13.92	□□□□□ -0.18
RNF31-208	ENST00000558907	PSG7	Q13046	419 aa		13.92	□□□□□ -0.18
RNF31-208	ENST00000558907	RFX4	Q33E94	735 aa		13.92	□□□□□ -0.18
RNF31-208	ENST00000558907	ZMAT1	Q5H9K5	638 aa		13.92	□□□□□ -0.18
RNF31-208	ENST00000558907	MTX3	Q5HYI7	312 aa		13.92	□□□□□ -0.18
RNF31-208	ENST00000558907	C1orf94	Q6P1W5	598 aa		13.92	□□□□□ -0.18
RNF31-208	ENST00000558907	ZSCAN2	Q7Z7L9	614 aa	Predicted RBP	13.92	□□□□□ -0.18
RNF31-208	ENST00000558907	SLC7A6	Q92536	515 aa		13.92	□□□□□ -0.18
RNF31-208	ENST00000558907	RAB1C	Q92928	201 aa		13.92	□□□□□ -0.18
RNF31-208	ENST00000558907	TSSK2	Q96PF2	358 aa		13.92	□□□□□ -0.18
RNF31-208	ENST00000558907	DIRC2	Q96SL1	478 aa		13.92	□□□□□ -0.18
RNF31-208	ENST00000558907	OR52D1	Q9H346	318 aa		13.92	□□□□□ -0.18
RNF31-208	ENST00000558907	KLHL21	Q9UJP4	597 aa		13.92	□□□□□ -0.18
RNF31-208	ENST00000558907	ZDHHC8	Q9ULC8	765 aa		13.92	□□□□□ -0.18
RNF31-208	ENST00000558907	POLR1D	Q9Y2S0	133 aa		13.92	□□□□□ -0.18
RNF31-208	ENST00000558907	STARD10	Q9Y365	291 aa		13.92	□□□□□ -0.18
RNF31-208	ENST00000558907	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	13.92	□□□□□ -0.18	1e-8	■■■■□ 24
RNF31-208	ENST00000558907	DCTN6	O00399	190 aa		13.91	□□□□□ -0.18
RNF31-208	ENST00000558907	RER1	O15258	196 aa		13.91	□□□□□ -0.18
RNF31-208	ENST00000558907	TUBG1	P23258	451 aa		13.91	□□□□□ -0.18
RNF31-208	ENST00000558907	FPR3	P25089	353 aa		13.91	□□□□□ -0.18
RNF31-208	ENST00000558907	CRABP1	P29762	137 aa		13.91	□□□□□ -0.18
RNF31-208	ENST00000558907	RRM2	P31350	389 aa		13.91	□□□□□ -0.18
RNF31-208	ENST00000558907	TNFAIP6	P98066	277 aa	Predicted RBP	13.91	□□□□□ -0.18
RNF31-208	ENST00000558907	KCNMB1	Q16558	191 aa		13.91	□□□□□ -0.18
RNF31-208	ENST00000558907	MEP1B	Q16820	701 aa		13.91	□□□□□ -0.18
RNF31-208	ENST00000558907	CCDC92	Q53HC0	331 aa	Predicted RBP	13.91	□□□□□ -0.18
RNF31-208	ENST00000558907	SPRN	Q5BIV9	151 aa		13.91	□□□□□ -0.18
RNF31-208	ENST00000558907	ACSM5	Q6NUN0	579 aa		13.91	□□□□□ -0.18
RNF31-208	ENST00000558907	LEG1	Q6P5S2	330 aa		13.91	□□□□□ -0.18
RNF31-208	ENST00000558907	DNM1P34	Q6PK57	102 aa		13.91	□□□□□ -0.18
RNF31-208	ENST00000558907	JAZF1	Q86VZ6	243 aa		13.91	□□□□□ -0.18
RNF31-208	ENST00000558907	OR1F12	Q8NHA8	337 aa		13.91	□□□□□ -0.18
RNF31-208	ENST00000558907	RAB39B	Q96DA2	213 aa		13.91	□□□□□ -0.18
RNF31-208	ENST00000558907	CMBL	Q96DG6	245 aa		13.91	□□□□□ -0.18
RNF31-208	ENST00000558907	IFT27	Q9BW83	186 aa		13.91	□□□□□ -0.18
RNF31-208	ENST00000558907	SRA1	Q9HD15	236 aa	Known RBP	13.91	□□□□□ -0.18
RNF31-208	ENST00000558907	TUBG2	Q9NRH3	451 aa		13.91	□□□□□ -0.18
RNF31-208	ENST00000558907	NDE1	Q9NXR1	346 aa		13.91	□□□□□ -0.18
RNF31-208	ENST00000558907	PURG	Q9UJV8	347 aa	Known RBP	13.91	□□□□□ -0.18
RNF31-208	ENST00000558907	TMCC3	Q9ULS5	477 aa		13.91	□□□□□ -0.18
RNF31-208	ENST00000558907	TRAV20	A0A0B4J274	112 aa		13.9	□□□□□ -0.18
RNF31-208	ENST00000558907	OR6C6	A6NF89	314 aa		13.9	□□□□□ -0.18
RNF31-208	ENST00000558907	UBOX5	O94941	541 aa		13.9	□□□□□ -0.18
RNF31-208	ENST00000558907	REN	P00797	406 aa		13.9	□□□□□ -0.18
RNF31-208	ENST00000558907	CD55	P08174	381 aa		13.9	□□□□□ -0.18
RNF31-208	ENST00000558907	ANPEP	P15144	967 aa		13.9	□□□□□ -0.18
RNF31-208	ENST00000558907	IFNGR2	P38484	337 aa		13.9	□□□□□ -0.18
RNF31-208	ENST00000558907	SLC3A1	Q07837	685 aa		13.9	□□□□□ -0.18
RNF31-208	ENST00000558907	LIPN	Q5VXI9	398 aa		13.9	□□□□□ -0.18
RNF31-208	ENST00000558907	ZNF771	Q7L3S4	317 aa	Predicted RBP	13.9	□□□□□ -0.18
RNF31-208	ENST00000558907	ZDHHC21	Q8IVQ6	265 aa		13.9	□□□□□ -0.18
RNF31-208	ENST00000558907	OR4K13	Q8NH42	304 aa		13.9	□□□□□ -0.18
RNF31-208	ENST00000558907	SAMD8	Q96LT4	415 aa		13.9	□□□□□ -0.18
RNF31-208	ENST00000558907	NMNAT3	Q96T66	252 aa		13.9	□□□□□ -0.18
RNF31-208	ENST00000558907	C19orf24	Q9BVV8	132 aa		13.9	□□□□□ -0.18
RNF31-208	ENST00000558907	IL1RAP	Q9NPH3	570 aa		13.9	□□□□□ -0.18
RNF31-208	ENST00000558907	B9D1	Q9UPM9	204 aa		13.9	□□□□□ -0.18
RNF31-208	ENST00000558907	COL6A5	A8TX70	2615 aa		13.9	□□□□□ -0.18
RNF31-208	ENST00000558907	IGLV1-36	A0A0B4J1U3	117 aa		13.89	□□□□□ -0.19
RNF31-208	ENST00000558907	ISPD	A4D126	451 aa		13.89	□□□□□ -0.19
RNF31-208	ENST00000558907	ARPC3	O15145	178 aa		13.89	□□□□□ -0.19
RNF31-208	ENST00000558907	DEAF1	O75398	565 aa	Predicted RBP	13.89	□□□□□ -0.19
RNF31-208	ENST00000558907	IGHV2-5	P01817	119 aa		13.89	□□□□□ -0.19
RNF31-208	ENST00000558907	DBH	P09172	617 aa		13.89	□□□□□ -0.19
RNF31-208	ENST00000558907	HIST1H1C	P16403	213 aa	Known RBP	13.89	□□□□□ -0.19
RNF31-208	ENST00000558907	KITLG	P21583	273 aa		13.89	□□□□□ -0.19
RNF31-208	ENST00000558907	NOS3	P29474	1203 aa		13.89	□□□□□ -0.19
RNF31-208	ENST00000558907	GSS	P48637	474 aa		13.89	□□□□□ -0.19
RNF31-208	ENST00000558907	DBP	Q10586	325 aa	Predicted RBP	13.89	□□□□□ -0.19
RNF31-208	ENST00000558907	CDK5R2	Q13319	367 aa		13.89	□□□□□ -0.19
RNF31-208	ENST00000558907	SPATS1	Q496A3	300 aa		13.89	□□□□□ -0.19
RNF31-208	ENST00000558907	FAHD2B	Q6P2I3	314 aa	Predicted RBP	13.89	□□□□□ -0.19
RNF31-208	ENST00000558907	PGM2L1	Q6PCE3	622 aa		13.89	□□□□□ -0.19
RNF31-208	ENST00000558907	SHQ1	Q6PI26	577 aa	Known RBP	13.89	□□□□□ -0.19
RNF31-208	ENST00000558907	OR6V1	Q8N148	313 aa		13.89	□□□□□ -0.19
RNF31-208	ENST00000558907	RFLNB	Q8N5W9	214 aa		13.89	□□□□□ -0.19
RNF31-208	ENST00000558907	GJC3	Q8NFK1	279 aa		13.89	□□□□□ -0.19
RNF31-208	ENST00000558907	GNPDA2	Q8TDQ7	276 aa		13.89	□□□□□ -0.19
RNF31-208	ENST00000558907	PTP4A1	Q93096	173 aa		13.89	□□□□□ -0.19
RNF31-208	ENST00000558907	HAVCR1	Q96D42	359 aa		13.89	□□□□□ -0.19
RNF31-208	ENST00000558907	FAHD2A	Q96GK7	314 aa		13.89	□□□□□ -0.19
RNF31-208	ENST00000558907	COG8	Q96MW5	612 aa		13.89	□□□□□ -0.19
RNF31-208	ENST00000558907	GAL3ST1	Q99999	423 aa		13.89	□□□□□ -0.19
RNF31-208	ENST00000558907	METTL17	Q9H7H0	456 aa	Predicted RBP	13.89	□□□□□ -0.19
RNF31-208	ENST00000558907	RPRD1B	Q9NQG5	326 aa	Known RBP	13.89	□□□□□ -0.19
RNF31-208	ENST00000558907	ATPIF1	Q9UII2	106 aa		13.89	□□□□□ -0.19
RNF31-208	ENST00000558907	METRN	Q9UJH8	293 aa		13.89	□□□□□ -0.19
RNF31-208	ENST00000558907	LHFPL6	Q9Y693	200 aa		13.89	□□□□□ -0.19
RNF31-208	ENST00000558907	TCF21	O43680	179 aa		13.88	□□□□□ -0.19
RNF31-208	ENST00000558907	PLPP2	O43688	288 aa		13.88	□□□□□ -0.19
RNF31-208	ENST00000558907	TNFSF4	P23510	183 aa		13.88	□□□□□ -0.19
RNF31-208	ENST00000558907	ERF	P50548	548 aa		13.88	□□□□□ -0.19
RNF31-208	ENST00000558907	MNAT1	P51948	309 aa		13.88	□□□□□ -0.19
RNF31-208	ENST00000558907	HIST1H3A	P68431	136 aa		13.88	□□□□□ -0.19
RNF31-208	ENST00000558907	HNRNPA0	Q13151	305 aa	Known RBP	13.88	□□□□□ -0.19
RNF31-208	ENST00000558907	HIST2H3PS2	Q5TEC6	136 aa		13.88	□□□□□ -0.19
RNF31-208	ENST00000558907	CORO6	Q6QEF8	472 aa		13.88	□□□□□ -0.19
RNF31-208	ENST00000558907	CYP2R1	Q6VVX0	501 aa		13.88	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 31 ms