RNA–Protein interactions for RNA: ENST00000558867.1

CDC42BPB-203, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-203ENST00000558867 TMEM163Q8TC26 289 aa13.78□□□□□ -0.2
CDC42BPB-203ENST00000558867 FCGR1BQ92637 280 aa13.78□□□□□ -0.2
CDC42BPB-203ENST00000558867 RDH5Q92781 318 aa13.78□□□□□ -0.2
CDC42BPB-203ENST00000558867 FAHD2AQ96GK7 314 aa13.78□□□□□ -0.2
CDC42BPB-203ENST00000558867 SUCNR1Q9BXA5 334 aa13.78□□□□□ -0.2
CDC42BPB-203ENST00000558867 EGLN3Q9H6Z9 239 aa13.78□□□□□ -0.2
CDC42BPB-203ENST00000558867 MRPS18AQ9NVS2 196 aaKnown RBP13.78□□□□□ -0.2
CDC42BPB-203ENST00000558867 BAIAP2Q9UQB8 552 aa13.78□□□□□ -0.2
CDC42BPB-203ENST00000558867 RCE1Q9Y256 329 aa13.78□□□□□ -0.2
CDC42BPB-203ENST00000558867 SIGLEC7Q9Y286 467 aa13.78□□□□□ -0.2
CDC42BPB-203ENST00000558867 CEPT1Q9Y6K0 416 aa13.78□□□□□ -0.2
CDC42BPB-203ENST00000558867 PTGES3LE9PB15 166 aa13.77□□□□□ -0.21
CDC42BPB-203ENST00000558867 LYNX1G3V0Z9 82 aa13.77□□□□□ -0.21
CDC42BPB-203ENST00000558867 PTP4A3O75365 173 aa13.77□□□□□ -0.21
CDC42BPB-203ENST00000558867 AHSA1O95433 338 aa13.77□□□□□ -0.21
CDC42BPB-203ENST00000558867 CDK1P06493 297 aa13.77□□□□□ -0.21
CDC42BPB-203ENST00000558867 LYNX1P0DP58 116 aa13.77□□□□□ -0.21
CDC42BPB-203ENST00000558867 GPR4P46093 362 aa13.77□□□□□ -0.21
CDC42BPB-203ENST00000558867 CLDN17P56750 224 aa13.77□□□□□ -0.21
CDC42BPB-203ENST00000558867 RPS23P62266 143 aaKnown RBP13.77□□□□□ -0.21
CDC42BPB-203ENST00000558867 PMS2P3Q13401 168 aa13.77□□□□□ -0.21
CDC42BPB-203ENST00000558867 RAB39AQ14964 217 aa13.77□□□□□ -0.21
CDC42BPB-203ENST00000558867 OR2T33Q8NG76 320 aa13.77□□□□□ -0.21
CDC42BPB-203ENST00000558867 PFN4Q8NHR9 129 aa13.77□□□□□ -0.21
CDC42BPB-203ENST00000558867 CLDND2Q8NHS1 167 aa13.77□□□□□ -0.21
CDC42BPB-203ENST00000558867 GGHQ92820 318 aa13.77□□□□□ -0.21
CDC42BPB-203ENST00000558867 MRPL24Q96A35 216 aaKnown RBP13.77□□□□□ -0.21
CDC42BPB-203ENST00000558867 COPS4Q9BT78 406 aa13.77□□□□□ -0.21
CDC42BPB-203ENST00000558867 TSSK6Q9BXA6 273 aa13.77□□□□□ -0.21
CDC42BPB-203ENST00000558867 OR52D1Q9H346 318 aa13.77□□□□□ -0.21
CDC42BPB-203ENST00000558867 FN3KQ9H479 309 aa13.77□□□□□ -0.21
CDC42BPB-203ENST00000558867 LPAR2Q9HBW0 351 aa13.77□□□□□ -0.21
CDC42BPB-203ENST00000558867 NOX3Q9HBY0 568 aa13.77□□□□□ -0.21
CDC42BPB-203ENST00000558867 C20orf141Q9NUB4 165 aa13.77□□□□□ -0.21
CDC42BPB-203ENST00000558867 TBC1D23Q9NUY8 699 aa13.77□□□□□ -0.21
CDC42BPB-203ENST00000558867 SNTNA6NMZ2 147 aa13.76□□□□□ -0.21
CDC42BPB-203ENST00000558867 EFCAB9A8MZ26 197 aa13.76□□□□□ -0.21
CDC42BPB-203ENST00000558867 BHLHE40O14503 412 aa13.76□□□□□ -0.21
CDC42BPB-203ENST00000558867 BCL10O95999 233 aa13.76□□□□□ -0.21
CDC42BPB-203ENST00000558867 PNPP00491 289 aa13.76□□□□□ -0.21
CDC42BPB-203ENST00000558867 CELA3BP08861 270 aa13.76□□□□□ -0.21
CDC42BPB-203ENST00000558867 EPHA1P21709 976 aa13.76□□□□□ -0.21
CDC42BPB-203ENST00000558867 NR4A1P22736 598 aa13.76□□□□□ -0.21
CDC42BPB-203ENST00000558867 DCKP27707 260 aa13.76□□□□□ -0.21
CDC42BPB-203ENST00000558867 FXYD6P3P58550 94 aa13.76□□□□□ -0.21
CDC42BPB-203ENST00000558867 MRPS11P82912 194 aaKnown RBP13.76□□□□□ -0.21
CDC42BPB-203ENST00000558867 GALK2Q01415 458 aa13.76□□□□□ -0.21
CDC42BPB-203ENST00000558867 EMX1Q04741 257 aaPredicted RBP13.76□□□□□ -0.21
CDC42BPB-203ENST00000558867 C1DQ13901 141 aaKnown RBP13.76□□□□□ -0.21
CDC42BPB-203ENST00000558867 IRF3Q14653 427 aa13.76□□□□□ -0.21
CDC42BPB-203ENST00000558867 UBE2UQ5VVX9 321 aa13.76□□□□□ -0.21
CDC42BPB-203ENST00000558867 SMARCD3Q6STE5 483 aa13.76□□□□□ -0.21
CDC42BPB-203ENST00000558867 THSD4Q6ZMP0 1018 aa13.76□□□□□ -0.21
CDC42BPB-203ENST00000558867 LNX2Q8N448 690 aa13.76□□□□□ -0.21
CDC42BPB-203ENST00000558867 TCEANCQ8N8B7 351 aa13.76□□□□□ -0.21
CDC42BPB-203ENST00000558867 OR52L1Q8NGH7 329 aa13.76□□□□□ -0.21
CDC42BPB-203ENST00000558867 MFSD8Q8NHS3 518 aa13.76□□□□□ -0.21
CDC42BPB-203ENST00000558867 FANK1Q8TC84 345 aa13.76□□□□□ -0.21
CDC42BPB-203ENST00000558867 STK35Q8TDR2 534 aa13.76□□□□□ -0.21
CDC42BPB-203ENST00000558867 SGCDQ92629 289 aa13.76□□□□□ -0.21
CDC42BPB-203ENST00000558867 BCL7BQ9BQE9 202 aa13.76□□□□□ -0.21
CDC42BPB-203ENST00000558867 ZNF416Q9BWM5 594 aa13.76□□□□□ -0.21
CDC42BPB-203ENST00000558867 CDCA4Q9BXL8 241 aa13.76□□□□□ -0.21
CDC42BPB-203ENST00000558867 NARFLQ9H6Q4 476 aa13.76□□□□□ -0.21
CDC42BPB-203ENST00000558867 SEC61A2Q9H9S3 476 aa13.76□□□□□ -0.21
CDC42BPB-203ENST00000558867 TVP23BQ9NYZ1 205 aa13.76□□□□□ -0.21
CDC42BPB-203ENST00000558867 ERVK-18Q9QC07 812 aa13.76□□□□□ -0.21
CDC42BPB-203ENST00000558867 AASSQ9UDR5 926 aa13.76□□□□□ -0.21
CDC42BPB-203ENST00000558867 RPL36Q9Y3U8 105 aaKnown RBP13.76□□□□□ -0.21
CDC42BPB-203ENST00000558867 IRGMA1A4Y4 181 aa13.75□□□□□ -0.21
CDC42BPB-203ENST00000558867 SURF4O15260 269 aa13.75□□□□□ -0.21
CDC42BPB-203ENST00000558867 PRODHO43272 600 aa13.75□□□□□ -0.21
CDC42BPB-203ENST00000558867 PPIHO43447 177 aaKnown RBP13.75□□□□□ -0.21
CDC42BPB-203ENST00000558867 PRKYO43930 277 aa13.75□□□□□ -0.21
CDC42BPB-203ENST00000558867 ENTPD6O75354 484 aa13.75□□□□□ -0.21
CDC42BPB-203ENST00000558867 RGS9O75916 674 aaPredicted RBP13.75□□□□□ -0.21
CDC42BPB-203ENST00000558867 ZNF432O94892 652 aa13.75□□□□□ -0.21
CDC42BPB-203ENST00000558867 MT-ND2P03891 347 aa13.75□□□□□ -0.21
CDC42BPB-203ENST00000558867 GAAP10253 952 aa13.75□□□□□ -0.21
CDC42BPB-203ENST00000558867 P2RY4P51582 365 aa13.75□□□□□ -0.21
CDC42BPB-203ENST00000558867 FHL1Q13642 323 aa13.75□□□□□ -0.21
CDC42BPB-203ENST00000558867 SNAPC1Q16533 368 aa13.75□□□□□ -0.21
CDC42BPB-203ENST00000558867 CEACAM16Q2WEN9 425 aa13.75□□□□□ -0.21
CDC42BPB-203ENST00000558867 SYT6Q5T7P8 510 aaPredicted RBP13.75□□□□□ -0.21
CDC42BPB-203ENST00000558867 C5orf46Q6UWT4 87 aa13.75□□□□□ -0.21
CDC42BPB-203ENST00000558867 AHSA2Q719I0 299 aa13.75□□□□□ -0.21
CDC42BPB-203ENST00000558867 LINGO2Q7L985 606 aa13.75□□□□□ -0.21
CDC42BPB-203ENST00000558867 MDP1Q86V88 176 aa13.75□□□□□ -0.21
CDC42BPB-203ENST00000558867 IQCF1Q8N6M8 205 aa13.75□□□□□ -0.21
CDC42BPB-203ENST00000558867 OR4Q3Q8NH05 313 aa13.75□□□□□ -0.21
CDC42BPB-203ENST00000558867 TMIGD2Q96BF3 282 aa13.75□□□□□ -0.21
CDC42BPB-203ENST00000558867 SLC25A36Q96CQ1 311 aa13.75□□□□□ -0.21
CDC42BPB-203ENST00000558867 SGTBQ96EQ0 304 aa13.75□□□□□ -0.21
CDC42BPB-203ENST00000558867 OXGR1Q96P68 337 aa13.75□□□□□ -0.21
CDC42BPB-203ENST00000558867 NELFAQ9H3P2 528 aa13.75□□□□□ -0.21
CDC42BPB-203ENST00000558867 GPR35Q9HC97 309 aa13.75□□□□□ -0.21
CDC42BPB-203ENST00000558867 ACOT13Q9NPJ3 140 aa13.75□□□□□ -0.21
CDC42BPB-203ENST00000558867 B3GAT2Q9NPZ5 323 aa13.75□□□□□ -0.21
CDC42BPB-203ENST00000558867 TREM2Q9NZC2 230 aa13.75□□□□□ -0.21
CDC42BPB-203ENST00000558867 RSL24D1Q9UHA3 163 aaKnown RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms