RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 HIF1ANQ9NWT6 349 aa10.13□□□□□ -0.79
HERC1-202ENST00000558324 CD300AQ9UGN4 299 aa10.13□□□□□ -0.79
HERC1-202ENST00000558324 WIPI2Q9Y4P8 454 aa10.13□□□□□ -0.79
HERC1-202ENST00000558324 ATRQ13535 2644 aa10.12□□□□□ -0.79
HERC1-202ENST00000558324 ISPDA4D126 451 aa10.12□□□□□ -0.79
HERC1-202ENST00000558324 H3BSA7 217 aa10.12□□□□□ -0.79
HERC1-202ENST00000558324 DCTN6O00399 190 aa10.12□□□□□ -0.79
HERC1-202ENST00000558324 DBHP09172 617 aa10.12□□□□□ -0.79
HERC1-202ENST00000558324 PCMT1P22061 227 aa10.12□□□□□ -0.79
HERC1-202ENST00000558324 NOS3P29474 1203 aa10.12□□□□□ -0.79
HERC1-202ENST00000558324 SLC6A6P31641 620 aa10.12□□□□□ -0.79
HERC1-202ENST00000558324 RBMXP38159 391 aaKnown RBP10.12□□□□□ -0.79
HERC1-202ENST00000558324 ERFP50548 548 aa10.12□□□□□ -0.79
HERC1-202ENST00000558324 LMO4P61968 165 aa10.12□□□□□ -0.79
HERC1-202ENST00000558324 TNFAIP6P98066 277 aaPredicted RBP10.12□□□□□ -0.79
HERC1-202ENST00000558324 PSG7Q13046 419 aa10.12□□□□□ -0.79
HERC1-202ENST00000558324 RFX4Q33E94 735 aa10.12□□□□□ -0.79
HERC1-202ENST00000558324 CCDC92Q53HC0 331 aaPredicted RBP10.12□□□□□ -0.79
HERC1-202ENST00000558324 ZMAT1Q5H9K5 638 aa10.12□□□□□ -0.79
HERC1-202ENST00000558324 MTX3Q5HYI7 312 aa10.12□□□□□ -0.79
HERC1-202ENST00000558324 SHQ1Q6PI26 577 aaKnown RBP10.12□□□□□ -0.79
HERC1-202ENST00000558324 DNM1P34Q6PK57 102 aa10.12□□□□□ -0.79
HERC1-202ENST00000558324 CORO6Q6QEF8 472 aa10.12□□□□□ -0.79
HERC1-202ENST00000558324 ZDHHC21Q8IVQ6 265 aa10.12□□□□□ -0.79
HERC1-202ENST00000558324 C1orf174Q8IYL3 243 aa10.12□□□□□ -0.79
HERC1-202ENST00000558324 NPEPL1Q8NDH3 523 aa10.12□□□□□ -0.79
HERC1-202ENST00000558324 OR4K13Q8NH42 304 aa10.12□□□□□ -0.79
HERC1-202ENST00000558324 OR1F12Q8NHA8 337 aa10.12□□□□□ -0.79
HERC1-202ENST00000558324 TIMD4Q96H15 378 aa10.12□□□□□ -0.79
HERC1-202ENST00000558324 SAMD8Q96LT4 415 aa10.12□□□□□ -0.79
HERC1-202ENST00000558324 WACQ9BTA9 647 aa10.12□□□□□ -0.79
HERC1-202ENST00000558324 EGLN1Q9GZT9 426 aa10.12□□□□□ -0.79
HERC1-202ENST00000558324 FN3KQ9H479 309 aa10.12□□□□□ -0.79
HERC1-202ENST00000558324 ZNF665Q9H7R5 613 aa10.12□□□□□ -0.79
HERC1-202ENST00000558324 SRA1Q9HD15 236 aaKnown RBP10.12□□□□□ -0.79
HERC1-202ENST00000558324 TBCCD1Q9NVR7 557 aa10.12□□□□□ -0.79
HERC1-202ENST00000558324 NDE1Q9NXR1 346 aa10.12□□□□□ -0.79
HERC1-202ENST00000558324 TMCC3Q9ULS5 477 aa10.12□□□□□ -0.79
HERC1-202ENST00000558324 STARD10Q9Y365 291 aa10.12□□□□□ -0.79
HERC1-202ENST00000558324 OR6C6A6NF89 314 aa10.11□□□□□ -0.79
HERC1-202ENST00000558324 UBOX5O94941 541 aa10.11□□□□□ -0.79
HERC1-202ENST00000558324 TXNDC12O95881 172 aa10.11□□□□□ -0.79
HERC1-202ENST00000558324 RENP00797 406 aa10.11□□□□□ -0.79
HERC1-202ENST00000558324 HIST1H1CP16403 213 aaKnown RBP10.11□□□□□ -0.79
HERC1-202ENST00000558324 ATP6V1B2P21281 511 aa10.11□□□□□ -0.79
HERC1-202ENST00000558324 FPR3P25089 353 aa10.11□□□□□ -0.79
HERC1-202ENST00000558324 CRABP1P29762 137 aa10.11□□□□□ -0.79
HERC1-202ENST00000558324 IFNGR2P38484 337 aa10.11□□□□□ -0.79
HERC1-202ENST00000558324 LIPAP38571 399 aa10.11□□□□□ -0.79
HERC1-202ENST00000558324 LSM6P62312 80 aaKnown RBP10.11□□□□□ -0.79
HERC1-202ENST00000558324 CLEC12AQ5QGZ9 265 aa10.11□□□□□ -0.79
HERC1-202ENST00000558324 SLC35F1Q5T1Q4 408 aa10.11□□□□□ -0.79
HERC1-202ENST00000558324 FAHD2BQ6P2I3 314 aaPredicted RBP10.11□□□□□ -0.79
HERC1-202ENST00000558324 LINC00346Q8IVM7 164 aa10.11□□□□□ -0.79
HERC1-202ENST00000558324 OR5AS1Q8N127 324 aa10.11□□□□□ -0.79
HERC1-202ENST00000558324 SDR9C7Q8NEX9 313 aa10.11□□□□□ -0.79
HERC1-202ENST00000558324 OR2Z1Q8NG97 314 aa10.11□□□□□ -0.79
HERC1-202ENST00000558324 OR9Q2Q8NGE9 314 aa10.11□□□□□ -0.79
HERC1-202ENST00000558324 RAB1CQ92928 201 aa10.11□□□□□ -0.79
HERC1-202ENST00000558324 RAB39BQ96DA2 213 aa10.11□□□□□ -0.79
HERC1-202ENST00000558324 CMBLQ96DG6 245 aa10.11□□□□□ -0.79
HERC1-202ENST00000558324 FAHD2AQ96GK7 314 aa10.11□□□□□ -0.79
HERC1-202ENST00000558324 GAL3ST1Q99999 423 aa10.11□□□□□ -0.79
HERC1-202ENST00000558324 C19orf24Q9BVV8 132 aa10.11□□□□□ -0.79
HERC1-202ENST00000558324 METTL17Q9H7H0 456 aaPredicted RBP10.11□□□□□ -0.79
HERC1-202ENST00000558324 IL1RAPQ9NPH3 570 aa10.11□□□□□ -0.79
HERC1-202ENST00000558324 RPRD1BQ9NQG5 326 aaKnown RBP10.11□□□□□ -0.79
HERC1-202ENST00000558324 DCAF16Q9NXF7 216 aa10.11□□□□□ -0.79
HERC1-202ENST00000558324 UBAP1Q9NZ09 502 aa10.11□□□□□ -0.79
HERC1-202ENST00000558324 PTTG3PQ9NZH4 202 aa10.11□□□□□ -0.79
HERC1-202ENST00000558324 CGGBP1Q9UFW8 167 aaPredicted RBP10.11□□□□□ -0.79
HERC1-202ENST00000558324 PURGQ9UJV8 347 aaKnown RBP10.11□□□□□ -0.79
HERC1-202ENST00000558324 ZDHHC8Q9ULC8 765 aa10.11□□□□□ -0.79
HERC1-202ENST00000558324 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.11□□□□□ -0.79
HERC1-202ENST00000558324 IGLV1-36A0A0B4J1U3 117 aa10.1□□□□□ -0.79
HERC1-202ENST00000558324 B2RBV5 119 aa10.1□□□□□ -0.79
HERC1-202ENST00000558324 RGS9O75916 674 aaPredicted RBP10.1□□□□□ -0.79
HERC1-202ENST00000558324 THBS2P35442 1172 aa10.1□□□□□ -0.79
HERC1-202ENST00000558324 HLXQ14774 488 aaPredicted RBP10.1□□□□□ -0.79
HERC1-202ENST00000558324 ACSM5Q6NUN0 579 aa10.1□□□□□ -0.79
HERC1-202ENST00000558324 PGBD2Q6P3X8 592 aa10.1□□□□□ -0.79
HERC1-202ENST00000558324 ZNF620Q6ZNG0 422 aa10.1□□□□□ -0.79
HERC1-202ENST00000558324 Q6ZR03 302 aa10.1□□□□□ -0.79
HERC1-202ENST00000558324 OR6V1Q8N148 313 aa10.1□□□□□ -0.79
HERC1-202ENST00000558324 FITM2Q8N6M3 262 aa10.1□□□□□ -0.79
HERC1-202ENST00000558324 OR52E2Q8NGJ4 325 aa10.1□□□□□ -0.79
HERC1-202ENST00000558324 GNPDA2Q8TDQ7 276 aa10.1□□□□□ -0.79
HERC1-202ENST00000558324 DCLRE1CQ96SD1 692 aaKnown RBP10.1□□□□□ -0.79
HERC1-202ENST00000558324 OCEL1Q9H607 264 aa10.1□□□□□ -0.79
HERC1-202ENST00000558324 EGLN3Q9H6Z9 239 aa10.1□□□□□ -0.79
HERC1-202ENST00000558324 WDR76Q9H967 626 aa10.1□□□□□ -0.79
HERC1-202ENST00000558324 KLHL21Q9UJP4 597 aa10.1□□□□□ -0.79
HERC1-202ENST00000558324 B9D1Q9UPM9 204 aa10.1□□□□□ -0.79
HERC1-202ENST00000558324 LHFPL6Q9Y693 200 aa10.1□□□□□ -0.79
HERC1-202ENST00000558324 TRAV20A0A0B4J274 112 aa10.09□□□□□ -0.79
HERC1-202ENST00000558324 OR6C68A6NDL8 312 aa10.09□□□□□ -0.79
HERC1-202ENST00000558324 ARPC3O15145 178 aa10.09□□□□□ -0.79
HERC1-202ENST00000558324 TCF21O43680 179 aa10.09□□□□□ -0.79
HERC1-202ENST00000558324 PLPP2O43688 288 aa10.09□□□□□ -0.79
HERC1-202ENST00000558324 DEAF1O75398 565 aaPredicted RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms