RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 LINC01565O15544 149 aa12.78□□□□□ -0.36
SPG11-210ENST00000558319 BCL6P41182 706 aa12.78□□□□□ -0.36
SPG11-210ENST00000558319 ANKRD34AQ69YU3 496 aa12.78□□□□□ -0.36
SPG11-210ENST00000558319 ZADH2Q8N4Q0 377 aa12.78□□□□□ -0.36
SPG11-210ENST00000558319 NANOGP1Q8N7R0 232 aa12.78□□□□□ -0.36
SPG11-210ENST00000558319 DHRS9Q9BPW9 319 aa12.78□□□□□ -0.36
SPG11-210ENST00000558319 FGF21Q9NSA1 209 aa12.78□□□□□ -0.36
SPG11-210ENST00000558319 MED17Q9NVC6 651 aa12.78□□□□□ -0.36
SPG11-210ENST00000558319 LAMP3Q9UQV4 416 aa12.78□□□□□ -0.36
SPG11-210ENST00000558319 ARFGEF2Q9Y6D5 1785 aa12.77□□□□□ -0.36
SPG11-210ENST00000558319 A0A1W2PR80 420 aa12.77□□□□□ -0.36
SPG11-210ENST00000558319 TNFSF11O14788 317 aa12.77□□□□□ -0.36
SPG11-210ENST00000558319 MFSD9Q8NBP5 474 aa12.77□□□□□ -0.36
SPG11-210ENST00000558319 CLRN3Q8NCR9 226 aa12.77□□□□□ -0.36
SPG11-210ENST00000558319 CA5BP1Q8WTZ4 195 aa12.77□□□□□ -0.36
SPG11-210ENST00000558319 FAM117AQ9C073 453 aa12.77□□□□□ -0.36
SPG11-210ENST00000558319 CORINQ9Y5Q5 1042 aa12.77□□□□□ -0.36
SPG11-210ENST00000558319 A0A1W2PNV4 684 aa12.77□□□□□ -0.36
SPG11-210ENST00000558319 BMPR1BO00238 502 aa12.77□□□□□ -0.36
SPG11-210ENST00000558319 SLC2A10O95528 541 aa12.77□□□□□ -0.36
SPG11-210ENST00000558319 MFAP5Q13361 173 aa12.77□□□□□ -0.36
SPG11-210ENST00000558319 SPATA46Q5T0L3 261 aa12.77□□□□□ -0.36
SPG11-210ENST00000558319 ZNF626Q68DY1 528 aa12.77□□□□□ -0.36
SPG11-210ENST00000558319 B3GNT9Q6UX72 402 aa12.77□□□□□ -0.36
SPG11-210ENST00000558319 ACOT7LQ6ZUV0 252 aa12.77□□□□□ -0.36
SPG11-210ENST00000558319 OR52N5Q8NH56 324 aa12.77□□□□□ -0.36
SPG11-210ENST00000558319 TMEM43Q9BTV4 400 aa12.77□□□□□ -0.36
SPG11-210ENST00000558319 COA3Q9Y2R0 106 aaPredicted RBP12.77□□□□□ -0.36
SPG11-210ENST00000558319 K7EQM0 130 aa12.77□□□□□ -0.37
SPG11-210ENST00000558319 IGFBP6P24592 240 aaPredicted RBP12.77□□□□□ -0.37
SPG11-210ENST00000558319 SLC19A1P41440 591 aa12.77□□□□□ -0.37
SPG11-210ENST00000558319 RNF113BQ8IZP6 322 aaKnown RBP12.77□□□□□ -0.37
SPG11-210ENST00000558319 OR8B4Q96RC9 309 aa12.77□□□□□ -0.37
SPG11-210ENST00000558319 FIZ1Q96SL8 496 aa12.77□□□□□ -0.37
SPG11-210ENST00000558319 SLC25A21Q9BQT8 299 aaPredicted RBP12.77□□□□□ -0.37
SPG11-210ENST00000558319 ZNF2Q9BSG1 426 aaPredicted RBP12.77□□□□□ -0.37
SPG11-210ENST00000558319 MOKQ9UQ07 419 aa12.77□□□□□ -0.37
SPG11-210ENST00000558319 HOXC8P31273 242 aa12.77□□□□□ -0.37
SPG11-210ENST00000558319 CXorf67Q86X51 503 aaPredicted RBP12.77□□□□□ -0.37
SPG11-210ENST00000558319 CCL4L1Q8NHW4 92 aa12.77□□□□□ -0.37
SPG11-210ENST00000558319 PBX4Q9BYU1 374 aa12.77□□□□□ -0.37
SPG11-210ENST00000558319 SHARPINQ9H0F6 387 aa12.77□□□□□ -0.37
SPG11-210ENST00000558319 RGPD2P0DJD1 1756 aa12.77□□□□□ -0.37
SPG11-210ENST00000558319 OR2F2O95006 317 aa12.77□□□□□ -0.37
SPG11-210ENST00000558319 OR2F1Q13607 317 aa12.77□□□□□ -0.37
SPG11-210ENST00000558319 ANKRD53Q8N9V6 530 aa12.77□□□□□ -0.37
SPG11-210ENST00000558319 OR5AP2Q8NGF4 316 aa12.77□□□□□ -0.37
SPG11-210ENST00000558319 RPS27P42677 84 aaKnown RBP12.76□□□□□ -0.37
SPG11-210ENST00000558319 SAXO2Q658L1 398 aa12.76□□□□□ -0.37
SPG11-210ENST00000558319 ZNF787Q6DD87 383 aa12.76□□□□□ -0.37
SPG11-210ENST00000558319 VWA1Q6PCB0 445 aa12.76□□□□□ -0.37
SPG11-210ENST00000558319 PGAP3Q96FM1 320 aaPredicted RBP12.76□□□□□ -0.37
SPG11-210ENST00000558319 ATP13A2Q9NQ11 1180 aa12.76□□□□□ -0.37
SPG11-210ENST00000558319 RAB38P57729 211 aa12.76□□□□□ -0.37
SPG11-210ENST00000558319 ASAH1Q13510 395 aa12.76□□□□□ -0.37
SPG11-210ENST00000558319 TOMM20LQ6UXN7 152 aa12.76□□□□□ -0.37
SPG11-210ENST00000558319 ASB11Q8WXH4 323 aa12.76□□□□□ -0.37
SPG11-210ENST00000558319 TSLPQ969D9 159 aa12.76□□□□□ -0.37
SPG11-210ENST00000558319 CHST6Q9GZX3 395 aa12.76□□□□□ -0.37
SPG11-210ENST00000558319 CLEC5AQ9NY25 188 aa12.76□□□□□ -0.37
SPG11-210ENST00000558319 PADI1Q9ULC6 663 aa12.76□□□□□ -0.37
SPG11-210ENST00000558319 NEURL4Q96JN8 1562 aa12.76□□□□□ -0.37
SPG11-210ENST00000558319 LOC102723971A0A1B0GUV8 181 aa12.76□□□□□ -0.37
SPG11-210ENST00000558319 TMX2-CTNND1H3BSU7 103 aa12.76□□□□□ -0.37
SPG11-210ENST00000558319 CTNSO60931 367 aa12.76□□□□□ -0.37
SPG11-210ENST00000558319 GPX5O75715 221 aa12.76□□□□□ -0.37
SPG11-210ENST00000558319 GLAP06280 429 aa12.76□□□□□ -0.37
SPG11-210ENST00000558319 JUNBP17275 347 aaPredicted RBP12.76□□□□□ -0.37
SPG11-210ENST00000558319 REEP5Q00765 189 aa12.76□□□□□ -0.37
SPG11-210ENST00000558319 SMIM7Q9BQ49 75 aa12.76□□□□□ -0.37
SPG11-210ENST00000558319 CHD4Q14839 1912 aa12.76□□□□□ -0.37
SPG11-210ENST00000558319 CD1CP29017 333 aa12.76□□□□□ -0.37
SPG11-210ENST00000558319 SNRPEP62304 92 aaKnown RBP12.76□□□□□ -0.37
SPG11-210ENST00000558319 LRP11Q86VZ4 500 aa12.76□□□□□ -0.37
SPG11-210ENST00000558319 OR10J5Q8NHC4 309 aa12.76□□□□□ -0.37
SPG11-210ENST00000558319 OR5H15A6NDH6 313 aa12.76□□□□□ -0.37
SPG11-210ENST00000558319 OR5H1A6NKK0 313 aa12.76□□□□□ -0.37
SPG11-210ENST00000558319 CSF2RBP32927 897 aa12.76□□□□□ -0.37
SPG11-210ENST00000558319 NAXDQ8IW45 347 aa12.76□□□□□ -0.37
SPG11-210ENST00000558319 SERINC4A6NH21 518 aa12.75□□□□□ -0.37
SPG11-210ENST00000558319 AQP8O94778 261 aa12.75□□□□□ -0.37
SPG11-210ENST00000558319 CDK5Q00535 292 aa12.75□□□□□ -0.37
SPG11-210ENST00000558319 TMEM99Q8N816 258 aa12.75□□□□□ -0.37
SPG11-210ENST00000558319 GHRLQ9UBU3 117 aa12.75□□□□□ -0.37
SPG11-210ENST00000558319 SLC23A1Q9UHI7 598 aa12.75□□□□□ -0.37
SPG11-210ENST00000558319 DEGS1O15121 323 aa12.75□□□□□ -0.37
SPG11-210ENST00000558319 DYNC2LI1Q8TCX1 351 aa12.75□□□□□ -0.37
SPG11-210ENST00000558319 B3GALT5Q9Y2C3 310 aa12.75□□□□□ -0.37
SPG11-210ENST00000558319 JTBO76095 146 aa12.75□□□□□ -0.37
SPG11-210ENST00000558319 TTRP02766 147 aa12.75□□□□□ -0.37
SPG11-210ENST00000558319 SLC25A6P12236 298 aa12.75□□□□□ -0.37
SPG11-210ENST00000558319 RFX2P48378 723 aa12.75□□□□□ -0.37
SPG11-210ENST00000558319 CSNK1DP48730 415 aa12.75□□□□□ -0.37
SPG11-210ENST00000558319 GABREP78334 506 aa12.75□□□□□ -0.37
SPG11-210ENST00000558319 ETFDHQ16134 617 aa12.75□□□□□ -0.37
SPG11-210ENST00000558319 TBC1D28Q2M2D7 210 aa12.75□□□□□ -0.37
SPG11-210ENST00000558319 NCR3LG1Q68D85 454 aa12.75□□□□□ -0.37
SPG11-210ENST00000558319 ARRDC2Q8TBH0 407 aa12.75□□□□□ -0.37
SPG11-210ENST00000558319 ARHGDIGQ99819 225 aa12.75□□□□□ -0.37
SPG11-210ENST00000558319 AUNIPQ9H7T9 357 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms