RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 ABCD4O14678 606 aa4.57□□□□□ -1.68
RTF1-204ENST00000558117 LIN7AO14910 233 aaPredicted RBP4.57□□□□□ -1.68
RTF1-204ENST00000558117 LSM8O95777 96 aaKnown RBP4.57□□□□□ -1.68
RTF1-204ENST00000558117 GAS8O95995 478 aa4.57□□□□□ -1.68
RTF1-204ENST00000558117 CHRNGP07510 517 aa4.57□□□□□ -1.68
RTF1-204ENST00000558117 YES1P07947 543 aa4.57□□□□□ -1.68
RTF1-204ENST00000558117 SLC35E2P0CK97 266 aa4.57□□□□□ -1.68
RTF1-204ENST00000558117 KRT3P12035 628 aa4.57□□□□□ -1.68
RTF1-204ENST00000558117 UCHL3P15374 230 aa4.57□□□□□ -1.68
RTF1-204ENST00000558117 PRKACGP22612 351 aa4.57□□□□□ -1.68
RTF1-204ENST00000558117 MSNP26038 577 aaKnown RBP4.57□□□□□ -1.68
RTF1-204ENST00000558117 HTR2AP28223 471 aa4.57□□□□□ -1.68
RTF1-204ENST00000558117 FOXN2P32314 431 aa4.57□□□□□ -1.68
RTF1-204ENST00000558117 SLC1A3P43003 542 aa4.57□□□□□ -1.68
RTF1-204ENST00000558117 STARP49675 285 aa4.57□□□□□ -1.68
RTF1-204ENST00000558117 LHX2P50458 406 aa4.57□□□□□ -1.68
RTF1-204ENST00000558117 CLDN18P56856 261 aa4.57□□□□□ -1.68
RTF1-204ENST00000558117 RELAQ04206 551 aa4.57□□□□□ -1.68
RTF1-204ENST00000558117 CHRNB3Q05901 458 aa4.57□□□□□ -1.68
RTF1-204ENST00000558117 OPCMLQ14982 345 aa4.57□□□□□ -1.68
RTF1-204ENST00000558117 ADPRMQ3LIE5 342 aa4.57□□□□□ -1.68
RTF1-204ENST00000558117 PIGGQ5H8A4 983 aa4.57□□□□□ -1.68
RTF1-204ENST00000558117 TAF3Q5VWG9 929 aa4.57□□□□□ -1.68
RTF1-204ENST00000558117 ZNF544Q6NX49 715 aa4.57□□□□□ -1.68
RTF1-204ENST00000558117 HSDL2Q6YN16 418 aa4.57□□□□□ -1.68
RTF1-204ENST00000558117 VN1R4Q7Z5H5 301 aa4.57□□□□□ -1.68
RTF1-204ENST00000558117 CATSPERDQ86XM0 798 aa4.57□□□□□ -1.68
RTF1-204ENST00000558117 FAM83FQ8NEG4 500 aaPredicted RBP4.57□□□□□ -1.68
RTF1-204ENST00000558117 OR8J1Q8NGP2 316 aa4.57□□□□□ -1.68
RTF1-204ENST00000558117 OR51F2Q8NH61 342 aa4.57□□□□□ -1.68
RTF1-204ENST00000558117 SLC26A7Q8TE54 656 aa4.57□□□□□ -1.68
RTF1-204ENST00000558117 CHPT1Q8WUD6 406 aa4.57□□□□□ -1.68
RTF1-204ENST00000558117 SLC41A3Q96GZ6 507 aa4.57□□□□□ -1.68
RTF1-204ENST00000558117 C2orf48Q96LS8 159 aa4.57□□□□□ -1.68
RTF1-204ENST00000558117 ZNF597Q96LX8 424 aa4.57□□□□□ -1.68
RTF1-204ENST00000558117 TSSK2Q96PF2 358 aa4.57□□□□□ -1.68
RTF1-204ENST00000558117 PANX2Q96RD6 677 aa4.57□□□□□ -1.68
RTF1-204ENST00000558117 ZNF300Q96RE9 604 aaPredicted RBP4.57□□□□□ -1.68
RTF1-204ENST00000558117 PEBP4Q96S96 227 aa4.57□□□□□ -1.68
RTF1-204ENST00000558117 HBEGFQ99075 208 aa4.57□□□□□ -1.68
RTF1-204ENST00000558117 SNRNP25Q9BV90 132 aaKnown RBP4.57□□□□□ -1.68
RTF1-204ENST00000558117 GON7Q9BXV9 100 aa4.57□□□□□ -1.68
RTF1-204ENST00000558117 WDR76Q9H967 626 aa4.57□□□□□ -1.68
RTF1-204ENST00000558117 RNF122Q9H9V4 155 aa4.57□□□□□ -1.68
RTF1-204ENST00000558117 COPS7AQ9UBW8 275 aa4.57□□□□□ -1.68
RTF1-204ENST00000558117 OPN4Q9UHM6 478 aa4.57□□□□□ -1.68
RTF1-204ENST00000558117 CLEC4AQ9UMR7 237 aa4.57□□□□□ -1.68
RTF1-204ENST00000558117 CHMP2BQ9UQN3 213 aa4.57□□□□□ -1.68
RTF1-204ENST00000558117 SMAD5-AS1Q9Y6J3 95 aa4.57□□□□□ -1.68
RTF1-204ENST00000558117 SCN3AQ9NY46 2000 aa4.56□□□□□ -1.68
RTF1-204ENST00000558117 IGLV3-16A0A075B6K0 115 aa4.56□□□□□ -1.68
RTF1-204ENST00000558117 NCF1BA6NI72 391 aaPredicted RBP4.56□□□□□ -1.68
RTF1-204ENST00000558117 ANKRD30BLA7E2S9 258 aa4.56□□□□□ -1.68
RTF1-204ENST00000558117 NCF1CA8MVU1 366 aaPredicted RBP4.56□□□□□ -1.68
RTF1-204ENST00000558117 TMCO5BA8MYB1 307 aa4.56□□□□□ -1.68
RTF1-204ENST00000558117 H3BMM5 538 aa4.56□□□□□ -1.68
RTF1-204ENST00000558117 M0QX08 132 aa4.56□□□□□ -1.68
RTF1-204ENST00000558117 SCO2O43819 266 aa4.56□□□□□ -1.68
RTF1-204ENST00000558117 SNNO75324 88 aaPredicted RBP4.56□□□□□ -1.68
RTF1-204ENST00000558117 FGF4P08620 206 aa4.56□□□□□ -1.68
RTF1-204ENST00000558117 RALBP11234 206 aa4.56□□□□□ -1.68
RTF1-204ENST00000558117 ZNF708P17019 499 aa4.56□□□□□ -1.68
RTF1-204ENST00000558117 PAICSP22234 425 aaKnown RBP4.56□□□□□ -1.68
RTF1-204ENST00000558117 PPP2R1BP30154 601 aa4.56□□□□□ -1.68
RTF1-204ENST00000558117 TSC22D1Q15714 1073 aa4.56□□□□□ -1.68
RTF1-204ENST00000558117 KRT71Q3SY84 523 aa4.56□□□□□ -1.68
RTF1-204ENST00000558117 FAM182AQ5T1J6 154 aa4.56□□□□□ -1.68
RTF1-204ENST00000558117 CYP4V2Q6ZWL3 525 aaPredicted RBP4.56□□□□□ -1.68
RTF1-204ENST00000558117 ZNF571Q7Z3V5 609 aaPredicted RBP4.56□□□□□ -1.68
RTF1-204ENST00000558117 LRRC49Q8IUZ0 686 aa4.56□□□□□ -1.68
RTF1-204ENST00000558117 IQCF2Q8IXL9 164 aa4.56□□□□□ -1.68
RTF1-204ENST00000558117 OR10G3Q8NGC4 313 aa4.56□□□□□ -1.68
RTF1-204ENST00000558117 C4orf36Q96KX1 117 aa4.56□□□□□ -1.68
RTF1-204ENST00000558117 COPS8Q99627 209 aa4.56□□□□□ -1.68
RTF1-204ENST00000558117 TRABDQ9H4I3 376 aa4.56□□□□□ -1.68
RTF1-204ENST00000558117 HAUS4Q9H6D7 363 aa4.56□□□□□ -1.68
RTF1-204ENST00000558117 EGLN3Q9H6Z9 239 aa4.56□□□□□ -1.68
RTF1-204ENST00000558117 NHEJ1Q9H9Q4 299 aaPredicted RBP4.56□□□□□ -1.68
RTF1-204ENST00000558117 ANKHQ9HCJ1 492 aa4.56□□□□□ -1.68
RTF1-204ENST00000558117 LZTFL1Q9NQ48 299 aa4.56□□□□□ -1.68
RTF1-204ENST00000558117 FAM114A2Q9NRY5 505 aa4.56□□□□□ -1.68
RTF1-204ENST00000558117 PCYOX1Q9UHG3 505 aa4.56□□□□□ -1.68
RTF1-204ENST00000558117 RSPH14Q9UHP6 348 aa4.56□□□□□ -1.68
RTF1-204ENST00000558117 PSORS1C1Q9UIG5 152 aa4.56□□□□□ -1.68
RTF1-204ENST00000558117 PRDM4Q9UKN5 801 aa4.56□□□□□ -1.68
RTF1-204ENST00000558117 MOB4Q9Y3A3 225 aa4.56□□□□□ -1.68
RTF1-204ENST00000558117 J3QLI3 93 aa4.55□□□□□ -1.68
RTF1-204ENST00000558117 DNALI1O14645 258 aaPredicted RBP4.55□□□□□ -1.68
RTF1-204ENST00000558117 CHST10O43529 356 aa4.55□□□□□ -1.68
RTF1-204ENST00000558117 GMNNO75496 209 aa4.55□□□□□ -1.68
RTF1-204ENST00000558117 GCM2O75603 506 aaPredicted RBP4.55□□□□□ -1.68
RTF1-204ENST00000558117 KRT33AO76009 404 aa4.55□□□□□ -1.68
RTF1-204ENST00000558117 SRP72O76094 671 aaKnown RBP4.55□□□□□ -1.68
RTF1-204ENST00000558117 OR4F21O95013 312 aa4.55□□□□□ -1.68
RTF1-204ENST00000558117 RRASP10301 218 aa4.55□□□□□ -1.68
RTF1-204ENST00000558117 B4GALT1P15291 398 aa4.55□□□□□ -1.68
RTF1-204ENST00000558117 CMPK1P30085 196 aa4.55□□□□□ -1.68
RTF1-204ENST00000558117 SSTR1P30872 391 aa4.55□□□□□ -1.68
RTF1-204ENST00000558117 PRDX2P32119 198 aa4.55□□□□□ -1.68
RTF1-204ENST00000558117 DUTP33316 252 aaKnown RBP4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms