RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 GP2P55259 537 aaKnown RBP14.76□□□□□ -0.05
SNX1-203ENST00000558040 GRB2P62993 217 aaKnown RBP14.76□□□□□ -0.05
SNX1-203ENST00000558040 ECH1Q13011 328 aa14.76□□□□□ -0.05
SNX1-203ENST00000558040 GABRA6Q16445 453 aa14.76□□□□□ -0.05
SNX1-203ENST00000558040 CCDC58Q4VC31 144 aa14.76□□□□□ -0.05
SNX1-203ENST00000558040 ELFN2Q5R3F8 820 aa14.76□□□□□ -0.05
SNX1-203ENST00000558040 SFRP5Q5T4F7 317 aa14.76□□□□□ -0.05
SNX1-203ENST00000558040 ZNF544Q6NX49 715 aa14.76□□□□□ -0.05
SNX1-203ENST00000558040 ZNF474Q6S9Z5 364 aaPredicted RBP14.76□□□□□ -0.05
SNX1-203ENST00000558040 SPATC1Q76KD6 591 aa14.76□□□□□ -0.05
SNX1-203ENST00000558040 BHLHA15Q7RTS1 189 aaPredicted RBP14.76□□□□□ -0.05
SNX1-203ENST00000558040 FJX1Q86VR8 437 aa14.76□□□□□ -0.05
SNX1-203ENST00000558040 ALDH16A1Q8IZ83 802 aa14.76□□□□□ -0.05
SNX1-203ENST00000558040 ASB5Q8WWX0 329 aa14.76□□□□□ -0.05
SNX1-203ENST00000558040 UFD1Q92890 307 aa14.76□□□□□ -0.05
SNX1-203ENST00000558040 PELI1Q96FA3 418 aa14.76□□□□□ -0.05
SNX1-203ENST00000558040 BBC3Q96PG8 261 aaPredicted RBP14.76□□□□□ -0.05
SNX1-203ENST00000558040 ATF6BQ99941 703 aa14.76□□□□□ -0.05
SNX1-203ENST00000558040 HDHD5Q9BXW7 423 aa14.76□□□□□ -0.05
SNX1-203ENST00000558040 OR2H1Q9GZK4 316 aa14.76□□□□□ -0.05
SNX1-203ENST00000558040 BATF3Q9NR55 127 aa14.76□□□□□ -0.05
SNX1-203ENST00000558040 DDX28Q9NUL7 540 aaKnown RBP14.76□□□□□ -0.05
SNX1-203ENST00000558040 ACOXLQ9NUZ1 547 aa14.76□□□□□ -0.05
SNX1-203ENST00000558040 ELOVL5Q9NYP7 299 aa14.76□□□□□ -0.05
SNX1-203ENST00000558040 LRP12Q9Y561 859 aa14.76□□□□□ -0.05
SNX1-203ENST00000558040 FREM1Q5H8C1 2179 aa14.75□□□□□ -0.05
SNX1-203ENST00000558040 MAGEB4O15481 346 aaPredicted RBP14.75□□□□□ -0.05
SNX1-203ENST00000558040 DOK2O60496 412 aa14.75□□□□□ -0.05
SNX1-203ENST00000558040 ABHD16AO95870 558 aa14.75□□□□□ -0.05
SNX1-203ENST00000558040 CD79AP11912 226 aa14.75□□□□□ -0.05
SNX1-203ENST00000558040 IL32P24001 234 aa14.75□□□□□ -0.05
SNX1-203ENST00000558040 CHRNB4P30926 498 aa14.75□□□□□ -0.05
SNX1-203ENST00000558040 DCTDP32321 178 aa14.75□□□□□ -0.05
SNX1-203ENST00000558040 TGM4P49221 684 aa14.75□□□□□ -0.05
SNX1-203ENST00000558040 ZNF829Q3KNS6 432 aaPredicted RBP14.75□□□□□ -0.05
SNX1-203ENST00000558040 HIKESHIQ53FT3 197 aa14.75□□□□□ -0.05
SNX1-203ENST00000558040 CCDC92Q53HC0 331 aaPredicted RBP14.75□□□□□ -0.05
SNX1-203ENST00000558040 LIPNQ5VXI9 398 aa14.75□□□□□ -0.05
SNX1-203ENST00000558040 SATL1Q86VE3 508 aa14.75□□□□□ -0.05
SNX1-203ENST00000558040 OR10S1Q8NGN2 331 aa14.75□□□□□ -0.05
SNX1-203ENST00000558040 OR13F1Q8NGS4 319 aa14.75□□□□□ -0.05
SNX1-203ENST00000558040 PRR7Q8TB68 274 aa14.75□□□□□ -0.05
SNX1-203ENST00000558040 OPALINQ96PE5 141 aa14.75□□□□□ -0.05
SNX1-203ENST00000558040 OBP2BQ9NPH6 170 aa14.75□□□□□ -0.05
SNX1-203ENST00000558040 PNRC2Q9NPJ4 139 aaKnown RBP14.75□□□□□ -0.05
SNX1-203ENST00000558040 JKAMPQ9P055 326 aa14.75□□□□□ -0.05
SNX1-203ENST00000558040 SLC5A6Q9Y289 635 aa14.75□□□□□ -0.05
SNX1-203ENST00000558040 ITPR1Q14643 2758 aa14.75□□□□□ -0.05
SNX1-203ENST00000558040 ARPC4-TTLL3A0A0A6YYG9 625 aa14.74□□□□□ -0.05
SNX1-203ENST00000558040 CCRL2O00421 344 aa14.74□□□□□ -0.05
SNX1-203ENST00000558040 RPP14O95059 124 aaKnown RBP14.74□□□□□ -0.05
SNX1-203ENST00000558040 WNT11O96014 354 aa14.74□□□□□ -0.05
SNX1-203ENST00000558040 HLA-HP01893 362 aa14.74□□□□□ -0.05
SNX1-203ENST00000558040 APOC1P02654 83 aa14.74□□□□□ -0.05
SNX1-203ENST00000558040 MMP7P09237 267 aaPredicted RBP14.74□□□□□ -0.05
SNX1-203ENST00000558040 CPEP16870 476 aa14.74□□□□□ -0.05
SNX1-203ENST00000558040 PSMB1P20618 241 aaKnown RBP14.74□□□□□ -0.05
SNX1-203ENST00000558040 GNLYP22749 145 aa14.74□□□□□ -0.05
SNX1-203ENST00000558040 PSG4Q00888 419 aa14.74□□□□□ -0.05
SNX1-203ENST00000558040 PLP2Q04941 152 aa14.74□□□□□ -0.05
SNX1-203ENST00000558040 TSTQ16762 297 aaKnown RBP14.74□□□□□ -0.05
SNX1-203ENST00000558040 GSG1Q2KHT4 349 aa14.74□□□□□ -0.05
SNX1-203ENST00000558040 SLC25A35Q3KQZ1 300 aa14.74□□□□□ -0.05
SNX1-203ENST00000558040 C4orf17Q53FE4 359 aa14.74□□□□□ -0.05
SNX1-203ENST00000558040 C1QTNF12Q5T7M4 302 aa14.74□□□□□ -0.05
SNX1-203ENST00000558040 RPL22L1Q6P5R6 122 aaKnown RBP14.74□□□□□ -0.05
SNX1-203ENST00000558040 LIX1LQ8IVB5 337 aa14.74□□□□□ -0.05
SNX1-203ENST00000558040 RELL2Q8NC24 303 aaPredicted RBP14.74□□□□□ -0.05
SNX1-203ENST00000558040 COQ7Q99807 217 aa14.74□□□□□ -0.05
SNX1-203ENST00000558040 USB1Q9BQ65 265 aaKnown RBP14.74□□□□□ -0.05
SNX1-203ENST00000558040 SLC17A5Q9NRA2 495 aa14.74□□□□□ -0.05
SNX1-203ENST00000558040 ZNF224Q9NZL3 707 aa14.74□□□□□ -0.05
SNX1-203ENST00000558040 ATPIF1Q9UII2 106 aa14.74□□□□□ -0.05
SNX1-203ENST00000558040 INTS1Q8N201 2190 aaKnown RBP14.74□□□□□ -0.05
SNX1-203ENST00000558040 LRRTM2O43300 516 aa14.73□□□□□ -0.05
SNX1-203ENST00000558040 SYNGR3O43761 229 aa14.73□□□□□ -0.05
SNX1-203ENST00000558040 LALBAP00709 142 aa14.73□□□□□ -0.05
SNX1-203ENST00000558040 PRB1P04280 392 aa14.73□□□□□ -0.05
SNX1-203ENST00000558040 PATE4P0C8F1 98 aa14.73□□□□□ -0.05
SNX1-203ENST00000558040 COX5BP10606 129 aa14.73□□□□□ -0.05
SNX1-203ENST00000558040 PAX7P23759 505 aa14.73□□□□□ -0.05
SNX1-203ENST00000558040 PSMB10P40306 273 aa14.73□□□□□ -0.05
SNX1-203ENST00000558040 RGS6P49758 472 aa14.73□□□□□ -0.05
SNX1-203ENST00000558040 RAB1AP62820 205 aa14.73□□□□□ -0.05
SNX1-203ENST00000558040 GPR50Q13585 617 aa14.73□□□□□ -0.05
SNX1-203ENST00000558040 TPBGQ13641 420 aa14.73□□□□□ -0.05
SNX1-203ENST00000558040 IGFBP7Q16270 282 aa14.73□□□□□ -0.05
SNX1-203ENST00000558040 PABPC1L2AQ5JQF8 200 aa14.73□□□□□ -0.05
SNX1-203ENST00000558040 ZNF774Q6NX45 483 aa14.73□□□□□ -0.05
SNX1-203ENST00000558040 STAC2Q6ZMT1 411 aa14.73□□□□□ -0.05
SNX1-203ENST00000558040 ZNF843Q8N446 348 aa14.73□□□□□ -0.05
SNX1-203ENST00000558040 STEAP2Q8NFT2 490 aa14.73□□□□□ -0.05
SNX1-203ENST00000558040 OR1F12Q8NHA8 337 aa14.73□□□□□ -0.05
SNX1-203ENST00000558040 FGFBP3Q8TAT2 258 aa14.73□□□□□ -0.05
SNX1-203ENST00000558040 SPTSSAQ969W0 71 aa14.73□□□□□ -0.05
SNX1-203ENST00000558040 TMIGD2Q96BF3 282 aa14.73□□□□□ -0.05
SNX1-203ENST00000558040 CCDC120Q96HB5 630 aa14.73□□□□□ -0.05
SNX1-203ENST00000558040 KCNJ15Q99712 375 aa14.73□□□□□ -0.05
SNX1-203ENST00000558040 WNT5BQ9H1J7 359 aa14.73□□□□□ -0.05
SNX1-203ENST00000558040 MOV10Q9HCE1 1003 aaKnown RBP14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms