RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 TMEM178BH3BS89 294 aa13.39□□□□□ -0.27
SCFD1-224ENST00000557713 CDC42EP2O14613 210 aa13.39□□□□□ -0.27
SCFD1-224ENST00000557713 SURF4O15260 269 aa13.39□□□□□ -0.27
SCFD1-224ENST00000557713 DOK2O60496 412 aa13.39□□□□□ -0.27
SCFD1-224ENST00000557713 KRT34O76011 436 aa13.39□□□□□ -0.27
SCFD1-224ENST00000557713 WNT2P09544 360 aa13.39□□□□□ -0.27
SCFD1-224ENST00000557713 CD80P33681 288 aa13.39□□□□□ -0.27
SCFD1-224ENST00000557713 MDH2P40926 338 aaKnown RBP13.39□□□□□ -0.27
SCFD1-224ENST00000557713 ERFP50548 548 aa13.39□□□□□ -0.27
SCFD1-224ENST00000557713 PAX2Q02962 417 aa13.39□□□□□ -0.27
SCFD1-224ENST00000557713 BAMBIQ13145 260 aa13.39□□□□□ -0.27
SCFD1-224ENST00000557713 MESTQ5EB52 335 aa13.39□□□□□ -0.27
SCFD1-224ENST00000557713 TBPL2Q6SJ96 375 aa13.39□□□□□ -0.27
SCFD1-224ENST00000557713 TMPRSS11FQ6ZWK6 438 aa13.39□□□□□ -0.27
SCFD1-224ENST00000557713 MBOAT2Q6ZWT7 520 aa13.39□□□□□ -0.27
SCFD1-224ENST00000557713 FAM122BQ7Z309 247 aa13.39□□□□□ -0.27
SCFD1-224ENST00000557713 VTCN1Q7Z7D3 282 aa13.39□□□□□ -0.27
SCFD1-224ENST00000557713 ACOT11Q8WXI4 607 aaPredicted RBP13.39□□□□□ -0.27
SCFD1-224ENST00000557713 LZICQ8WZA0 190 aa13.39□□□□□ -0.27
SCFD1-224ENST00000557713 SLC7A6Q92536 515 aa13.39□□□□□ -0.27
SCFD1-224ENST00000557713 Q96M85 177 aa13.39□□□□□ -0.27
SCFD1-224ENST00000557713 COG8Q96MW5 612 aa13.39□□□□□ -0.27
SCFD1-224ENST00000557713 OR2V2Q96R30 315 aa13.39□□□□□ -0.27
SCFD1-224ENST00000557713 MRI1Q9BV20 369 aa13.39□□□□□ -0.27
SCFD1-224ENST00000557713 GCM1Q9NP62 436 aa13.39□□□□□ -0.27
SCFD1-224ENST00000557713 SAR1AQ9NR31 198 aa13.39□□□□□ -0.27
SCFD1-224ENST00000557713 MRGBPQ9NV56 204 aa13.39□□□□□ -0.27
SCFD1-224ENST00000557713 GID8Q9NWU2 228 aa13.39□□□□□ -0.27
SCFD1-224ENST00000557713 TRRAPQ9Y4A5 3859 aa13.39□□□□□ -0.27
SCFD1-224ENST00000557713 TEX13CA0A0J9YWL9 993 aa13.38□□□□□ -0.27
SCFD1-224ENST00000557713 PRSS37A4D1T9 235 aa13.38□□□□□ -0.27
SCFD1-224ENST00000557713 CLDN34H7C241 214 aa13.38□□□□□ -0.27
SCFD1-224ENST00000557713 RNASE1P07998 156 aaKnown RBP13.38□□□□□ -0.27
SCFD1-224ENST00000557713 CD14P08571 375 aa13.38□□□□□ -0.27
SCFD1-224ENST00000557713 RAC2P15153 192 aa13.38□□□□□ -0.27
SCFD1-224ENST00000557713 CTLA4P16410 223 aa13.38□□□□□ -0.27
SCFD1-224ENST00000557713 GUCY1A3Q02108 690 aa13.38□□□□□ -0.27
SCFD1-224ENST00000557713 AQP6Q13520 282 aa13.38□□□□□ -0.27
SCFD1-224ENST00000557713 MAPRE2Q15555 327 aa13.38□□□□□ -0.27
SCFD1-224ENST00000557713 ZBED5Q49AG3 693 aa13.38□□□□□ -0.27
SCFD1-224ENST00000557713 ESCO2Q56NI9 601 aa13.38□□□□□ -0.27
SCFD1-224ENST00000557713 PCYOX1LQ8NBM8 494 aa13.38□□□□□ -0.27
SCFD1-224ENST00000557713 TMEM165Q9HC07 324 aa13.38□□□□□ -0.27
SCFD1-224ENST00000557713 GMPR2Q9P2T1 348 aaKnown RBP13.38□□□□□ -0.27
SCFD1-224ENST00000557713 OR6C6A6NF89 314 aa13.37□□□□□ -0.27
SCFD1-224ENST00000557713 CEACAM18A8MTB9 384 aa13.37□□□□□ -0.27
SCFD1-224ENST00000557713 IFNL4K9M1U5 179 aa13.37□□□□□ -0.27
SCFD1-224ENST00000557713 IFNW1P05000 195 aa13.37□□□□□ -0.27
SCFD1-224ENST00000557713 PPIAL4GP0DN37 164 aa13.37□□□□□ -0.27
SCFD1-224ENST00000557713 CPT2P23786 658 aa13.37□□□□□ -0.27
SCFD1-224ENST00000557713 RPL4P36578 427 aaKnown RBP13.37□□□□□ -0.27
SCFD1-224ENST00000557713 GPR4P46093 362 aa13.37□□□□□ -0.27
SCFD1-224ENST00000557713 MMP16P51512 607 aa13.37□□□□□ -0.27
SCFD1-224ENST00000557713 LSM6P62312 80 aaKnown RBP13.37□□□□□ -0.27
SCFD1-224ENST00000557713 SLC9A3R2Q15599 337 aa13.37□□□□□ -0.27
SCFD1-224ENST00000557713 CCDC92Q53HC0 331 aaPredicted RBP13.37□□□□□ -0.27
SCFD1-224ENST00000557713 OTPQ5XKR4 325 aa13.37□□□□□ -0.27
SCFD1-224ENST00000557713 SLC27A4Q6P1M0 643 aa13.37□□□□□ -0.27
SCFD1-224ENST00000557713 C1orf94Q6P1W5 598 aa13.37□□□□□ -0.27
SCFD1-224ENST00000557713 ZNF730Q6ZMV8 503 aa13.37□□□□□ -0.27
SCFD1-224ENST00000557713 C9orf139Q6ZV77 190 aa13.37□□□□□ -0.27
SCFD1-224ENST00000557713 MUC20Q8N307 709 aaPredicted RBP13.37□□□□□ -0.27
SCFD1-224ENST00000557713 OR52E2Q8NGJ4 325 aa13.37□□□□□ -0.27
SCFD1-224ENST00000557713 OR1F12Q8NHA8 337 aa13.37□□□□□ -0.27
SCFD1-224ENST00000557713 ZNF570Q96NI8 536 aa13.37□□□□□ -0.27
SCFD1-224ENST00000557713 UNKLQ9H9P5 680 aaKnown RBP13.37□□□□□ -0.27
SCFD1-224ENST00000557713 CMTM6Q9NX76 183 aa13.37□□□□□ -0.27
SCFD1-224ENST00000557713 OR5V1Q9UGF6 321 aa13.37□□□□□ -0.27
SCFD1-224ENST00000557713 IL20RAQ9UHF4 553 aa13.37□□□□□ -0.27
SCFD1-224ENST00000557713 LRCH1Q9Y2L9 728 aa13.37□□□□□ -0.27
SCFD1-224ENST00000557713 POM121CA8CG34 1229 aa13.36□□□□□ -0.27
SCFD1-224ENST00000557713 J3QW42 95 aa13.36□□□□□ -0.27
SCFD1-224ENST00000557713 XKRYO14609 159 aa13.36□□□□□ -0.27
SCFD1-224ENST00000557713 PTP4A3O75365 173 aa13.36□□□□□ -0.27
SCFD1-224ENST00000557713 IGHV4-38-2P0DP08 117 aa13.36□□□□□ -0.27
SCFD1-224ENST00000557713 HLXQ14774 488 aaPredicted RBP13.36□□□□□ -0.27
SCFD1-224ENST00000557713 FBXW12Q6X9E4 464 aa13.36□□□□□ -0.27
SCFD1-224ENST00000557713 TSEN54Q7Z6J9 526 aaKnown RBP13.36□□□□□ -0.27
SCFD1-224ENST00000557713 OR5AS1Q8N127 324 aa13.36□□□□□ -0.27
SCFD1-224ENST00000557713 ATG16L2Q8NAA4 619 aa13.36□□□□□ -0.27
SCFD1-224ENST00000557713 OR8G5Q8NG78 346 aa13.36□□□□□ -0.27
SCFD1-224ENST00000557713 ZNF420Q8TAQ5 688 aaPredicted RBP13.36□□□□□ -0.27
SCFD1-224ENST00000557713 SLC25A28Q96A46 364 aa13.36□□□□□ -0.27
SCFD1-224ENST00000557713 DACT3Q96B18 629 aaPredicted RBP13.36□□□□□ -0.27
SCFD1-224ENST00000557713 MS4A7Q9GZW8 240 aaPredicted RBP13.36□□□□□ -0.27
SCFD1-224ENST00000557713 NMNAT1Q9HAN9 279 aaPredicted RBP13.36□□□□□ -0.27
SCFD1-224ENST00000557713 VSX1Q9NZR4 365 aaPredicted RBP13.36□□□□□ -0.27
SCFD1-224ENST00000557713 ASH2LQ9UBL3 628 aa13.36□□□□□ -0.27
SCFD1-224ENST00000557713 COA3Q9Y2R0 106 aaPredicted RBP13.36□□□□□ -0.27
SCFD1-224ENST00000557713 SOX21Q9Y651 276 aaPredicted RBP13.36□□□□□ -0.27
SCFD1-224ENST00000557713 H0YL77 283 aa13.35□□□□□ -0.27
SCFD1-224ENST00000557713 IMPA2O14732 288 aa13.35□□□□□ -0.27
SCFD1-224ENST00000557713 SLC16A7O60669 478 aa13.35□□□□□ -0.27
SCFD1-224ENST00000557713 KHDRBS3O75525 346 aaKnown RBP13.35□□□□□ -0.27
SCFD1-224ENST00000557713 PLATP00750 562 aa13.35□□□□□ -0.27
SCFD1-224ENST00000557713 DBHP09172 617 aa13.35□□□□□ -0.27
SCFD1-224ENST00000557713 RGS6P49758 472 aa13.35□□□□□ -0.27
SCFD1-224ENST00000557713 HIST1H3AP68431 136 aa13.35□□□□□ -0.27
SCFD1-224ENST00000557713 IL13RA1P78552 427 aa13.35□□□□□ -0.27
SCFD1-224ENST00000557713 KCNMB1Q16558 191 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms