RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 GPR160Q9UJ42 338 aa11.84□□□□□ -0.51
SHMT2-234ENST00000557703 CMAHPQ9Y471 501 aa11.84□□□□□ -0.51
SHMT2-234ENST00000557703 TMEM14AQ9Y6G1 99 aa11.84□□□□□ -0.51
SHMT2-234ENST00000557703 COMMD3-BMI1R4GMX3 469 aa11.84□□□□□ -0.51
SHMT2-234ENST00000557703 PMF1-BGLAPU3KQ54 211 aa11.84□□□□□ -0.51
SHMT2-234ENST00000557703 H0YJX3 145 aa11.83□□□□□ -0.52
SHMT2-234ENST00000557703 ZNF593O00488 134 aaPredicted RBP11.83□□□□□ -0.52
SHMT2-234ENST00000557703 ATE1O95260 518 aa11.83□□□□□ -0.52
SHMT2-234ENST00000557703 MPZL1O95297 269 aa11.83□□□□□ -0.52
SHMT2-234ENST00000557703 CELA3BP08861 270 aa11.83□□□□□ -0.52
SHMT2-234ENST00000557703 CD53P19397 219 aa11.83□□□□□ -0.52
SHMT2-234ENST00000557703 APEX1P27695 318 aaKnown RBP11.83□□□□□ -0.52
SHMT2-234ENST00000557703 EPHA2P29317 976 aa11.83□□□□□ -0.52
SHMT2-234ENST00000557703 PYCR1P32322 319 aa11.83□□□□□ -0.52
SHMT2-234ENST00000557703 SERPINF1P36955 418 aa11.83□□□□□ -0.52
SHMT2-234ENST00000557703 HTR5AP47898 357 aa11.83□□□□□ -0.52
SHMT2-234ENST00000557703 FABP6P51161 128 aa11.83□□□□□ -0.52
SHMT2-234ENST00000557703 SNRPGP62308 76 aaKnown RBP11.83□□□□□ -0.52
SHMT2-234ENST00000557703 HGFACQ04756 655 aa11.83□□□□□ -0.52
SHMT2-234ENST00000557703 SLC34A1Q06495 639 aa11.83□□□□□ -0.52
SHMT2-234ENST00000557703 POU4F2Q12837 409 aa11.83□□□□□ -0.52
SHMT2-234ENST00000557703 GGTLC2Q14390 218 aa11.83□□□□□ -0.52
SHMT2-234ENST00000557703 OGFRL1Q5TC84 451 aaPredicted RBP11.83□□□□□ -0.52
SHMT2-234ENST00000557703 AADACL4Q5VUY2 407 aa11.83□□□□□ -0.52
SHMT2-234ENST00000557703 TTC23Q5W5X9 447 aa11.83□□□□□ -0.52
SHMT2-234ENST00000557703 ZNF774Q6NX45 483 aa11.83□□□□□ -0.52
SHMT2-234ENST00000557703 MEPCEQ7L2J0 689 aaKnown RBP11.83□□□□□ -0.52
SHMT2-234ENST00000557703 TCEANCQ8N8B7 351 aa11.83□□□□□ -0.52
SHMT2-234ENST00000557703 OR5L1Q8NGL2 311 aa11.83□□□□□ -0.52
SHMT2-234ENST00000557703 ITFG2Q969R8 447 aa11.83□□□□□ -0.52
SHMT2-234ENST00000557703 OTULINQ96BN8 352 aa11.83□□□□□ -0.52
SHMT2-234ENST00000557703 TRMT61AQ96FX7 289 aaKnown RBP11.83□□□□□ -0.52
SHMT2-234ENST00000557703 MYCBPQ99417 103 aaPredicted RBP11.83□□□□□ -0.52
SHMT2-234ENST00000557703 PITX2Q99697 317 aa11.83□□□□□ -0.52
SHMT2-234ENST00000557703 SLC29A1Q99808 456 aa11.83□□□□□ -0.52
SHMT2-234ENST00000557703 OR51V1Q9H2C8 321 aa11.83□□□□□ -0.52
SHMT2-234ENST00000557703 VCX3BQ9H321 246 aa11.83□□□□□ -0.52
SHMT2-234ENST00000557703 TOR3AQ9H497 397 aa11.83□□□□□ -0.52
SHMT2-234ENST00000557703 NIPAL2Q9H841 368 aa11.83□□□□□ -0.52
SHMT2-234ENST00000557703 SP140LQ9H930 580 aa11.83□□□□□ -0.52
SHMT2-234ENST00000557703 RNPEPL1Q9HAU8 725 aa11.83□□□□□ -0.52
SHMT2-234ENST00000557703 DDX28Q9NUL7 540 aaKnown RBP11.83□□□□□ -0.52
SHMT2-234ENST00000557703 WARS2Q9UGM6 360 aaKnown RBP11.83□□□□□ -0.52
SHMT2-234ENST00000557703 GDF2Q9UK05 429 aaPredicted RBP11.83□□□□□ -0.52
SHMT2-234ENST00000557703 MYO9AB2RTY4 2548 aa11.83□□□□□ -0.52
SHMT2-234ENST00000557703 LOC100509620A0A075B734 347 aa11.82□□□□□ -0.52
SHMT2-234ENST00000557703 C5orf49A4QMS7 147 aa11.82□□□□□ -0.52
SHMT2-234ENST00000557703 FAM183AA6NL82 134 aa11.82□□□□□ -0.52
SHMT2-234ENST00000557703 ANKRD65E5RJM6 399 aa11.82□□□□□ -0.52
SHMT2-234ENST00000557703 OVOL3O00110 214 aa11.82□□□□□ -0.52
SHMT2-234ENST00000557703 PHYHO14832 338 aa11.82□□□□□ -0.52
SHMT2-234ENST00000557703 RER1O15258 196 aa11.82□□□□□ -0.52
SHMT2-234ENST00000557703 PRKYO43930 277 aa11.82□□□□□ -0.52
SHMT2-234ENST00000557703 LIPAP38571 399 aa11.82□□□□□ -0.52
SHMT2-234ENST00000557703 SNTB2Q13425 540 aaKnown RBP11.82□□□□□ -0.52
SHMT2-234ENST00000557703 KLHL12Q53G59 568 aa11.82□□□□□ -0.52
SHMT2-234ENST00000557703 CCDC92Q53HC0 331 aaPredicted RBP11.82□□□□□ -0.52
SHMT2-234ENST00000557703 DEGS2Q6QHC5 323 aa11.82□□□□□ -0.52
SHMT2-234ENST00000557703 MYPOPQ86VE0 399 aaPredicted RBP11.82□□□□□ -0.52
SHMT2-234ENST00000557703 EGFL6Q8IUX8 553 aa11.82□□□□□ -0.52
SHMT2-234ENST00000557703 TIGD4Q8IY51 512 aa11.82□□□□□ -0.52
SHMT2-234ENST00000557703 ZNF555Q8NEP9 628 aa11.82□□□□□ -0.52
SHMT2-234ENST00000557703 AKR7LQ8NHP1 331 aa11.82□□□□□ -0.52
SHMT2-234ENST00000557703 HTRA1Q92743 480 aa11.82□□□□□ -0.52
SHMT2-234ENST00000557703 SPTSSAQ969W0 71 aa11.82□□□□□ -0.52
SHMT2-234ENST00000557703 C4orf45Q96LM5 186 aa11.82□□□□□ -0.52
SHMT2-234ENST00000557703 Q96MT0 163 aa11.82□□□□□ -0.52
SHMT2-234ENST00000557703 ATF6BQ99941 703 aa11.82□□□□□ -0.52
SHMT2-234ENST00000557703 FOXC2Q99958 501 aa11.82□□□□□ -0.52
SHMT2-234ENST00000557703 TRAF4Q9BUZ4 470 aaPredicted RBP11.82□□□□□ -0.52
SHMT2-234ENST00000557703 GSX2Q9BZM3 304 aa11.82□□□□□ -0.52
SHMT2-234ENST00000557703 ZNF701Q9NV72 531 aaPredicted RBP11.82□□□□□ -0.52
SHMT2-234ENST00000557703 CGGBP1Q9UFW8 167 aaPredicted RBP11.82□□□□□ -0.52
SHMT2-234ENST00000557703 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.82□□□□□ -0.52
SHMT2-234ENST00000557703 GMPPBQ9Y5P6 360 aa11.82□□□□□ -0.52
SHMT2-234ENST00000557703 PDZD2O15018 2839 aa11.82□□□□□ -0.52
SHMT2-234ENST00000557703 USF3Q68DE3 2245 aa11.81□□□□□ -0.52
SHMT2-234ENST00000557703 LOC100130705A0A1B0GUX0 176 aa11.81□□□□□ -0.52
SHMT2-234ENST00000557703 FAM171A2A8MVW0 826 aa11.81□□□□□ -0.52
SHMT2-234ENST00000557703 ZNF878C9JN71 531 aa11.81□□□□□ -0.52
SHMT2-234ENST00000557703 ABHD16AO95870 558 aa11.81□□□□□ -0.52
SHMT2-234ENST00000557703 GYPBP06028 91 aa11.81□□□□□ -0.52
SHMT2-234ENST00000557703 OR4A8P0C604 315 aa11.81□□□□□ -0.52
SHMT2-234ENST00000557703 ZNF250P15622 560 aa11.81□□□□□ -0.52
SHMT2-234ENST00000557703 OTX1P32242 354 aaPredicted RBP11.81□□□□□ -0.52
SHMT2-234ENST00000557703 POLR2IP36954 125 aaKnown RBP11.81□□□□□ -0.52
SHMT2-234ENST00000557703 TPTEP56180 551 aa11.81□□□□□ -0.52
SHMT2-234ENST00000557703 RPS7P62081 194 aaKnown RBP11.81□□□□□ -0.52
SHMT2-234ENST00000557703 GRB2P62993 217 aaKnown RBP11.81□□□□□ -0.52
SHMT2-234ENST00000557703 SPOCK1Q08629 439 aa11.81□□□□□ -0.52
SHMT2-234ENST00000557703 IL18R1Q13478 541 aa11.81□□□□□ -0.52
SHMT2-234ENST00000557703 APOFQ13790 326 aa11.81□□□□□ -0.52
SHMT2-234ENST00000557703 ADIPOQQ15848 244 aa11.81□□□□□ -0.52
SHMT2-234ENST00000557703 OCLNQ16625 522 aa11.81□□□□□ -0.52
SHMT2-234ENST00000557703 MEP1BQ16820 701 aa11.81□□□□□ -0.52
SHMT2-234ENST00000557703 SWI5Q1ZZU3 235 aa11.81□□□□□ -0.52
SHMT2-234ENST00000557703 DEFB113Q30KQ7 82 aa11.81□□□□□ -0.52
SHMT2-234ENST00000557703 KRTAP27-1Q3LI81 207 aa11.81□□□□□ -0.52
SHMT2-234ENST00000557703 ZNF718Q3SXZ3 478 aa11.81□□□□□ -0.52
SHMT2-234ENST00000557703 RGS7BPQ6MZT1 257 aaPredicted RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms