RNA–Protein interactions for RNA: ENST00000557652.1

SUPT16H-208, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 5

Gene SUPT16H, Length 877 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-208ENST00000557652 ZNRF4Q8WWF5 429 aa12.25□□□□□ -0.45
SUPT16H-208ENST00000557652 PIK3IP1Q96FE7 263 aa12.25□□□□□ -0.45
SUPT16H-208ENST00000557652 MRPL48Q96GC5 212 aaKnown RBP12.25□□□□□ -0.45
SUPT16H-208ENST00000557652 ZNF184Q99676 751 aaPredicted RBP12.25□□□□□ -0.45
SUPT16H-208ENST00000557652 ANKRD60Q9BZ19 345 aa12.25□□□□□ -0.45
SUPT16H-208ENST00000557652 WNT5BQ9H1J7 359 aa12.25□□□□□ -0.45
SUPT16H-208ENST00000557652 SP140LQ9H930 580 aa12.25□□□□□ -0.45
SUPT16H-208ENST00000557652 ELOVL3Q9HB03 270 aa12.25□□□□□ -0.45
SUPT16H-208ENST00000557652 CDH20Q9HBT6 801 aa12.25□□□□□ -0.45
SUPT16H-208ENST00000557652 NOX3Q9HBY0 568 aa12.25□□□□□ -0.45
SUPT16H-208ENST00000557652 MRPS18AQ9NVS2 196 aaKnown RBP12.25□□□□□ -0.45
SUPT16H-208ENST00000557652 IGHV2OR16-5A0A0B4J2B6 119 aa12.24□□□□□ -0.45
SUPT16H-208ENST00000557652 TVP23AA6NH52 213 aa12.24□□□□□ -0.45
SUPT16H-208ENST00000557652 ZNF878C9JN71 531 aa12.24□□□□□ -0.45
SUPT16H-208ENST00000557652 H3BSA7 217 aa12.24□□□□□ -0.45
SUPT16H-208ENST00000557652 ABCD4O14678 606 aa12.24□□□□□ -0.45
SUPT16H-208ENST00000557652 FLNBO75369 2602 aaKnown RBP12.24□□□□□ -0.45
SUPT16H-208ENST00000557652 LYNP07948 512 aa12.24□□□□□ -0.45
SUPT16H-208ENST00000557652 SPARCP09486 303 aa12.24□□□□□ -0.45
SUPT16H-208ENST00000557652 SBK2P0C263 348 aa12.24□□□□□ -0.45
SUPT16H-208ENST00000557652 OR2T7P0C7T2 308 aa12.24□□□□□ -0.45
SUPT16H-208ENST00000557652 ZNF35P13682 527 aa12.24□□□□□ -0.45
SUPT16H-208ENST00000557652 ATP6V1E1P36543 226 aa12.24□□□□□ -0.45
SUPT16H-208ENST00000557652 RAD52P43351 418 aa12.24□□□□□ -0.45
SUPT16H-208ENST00000557652 CXCR4P61073 352 aa12.24□□□□□ -0.45
SUPT16H-208ENST00000557652 GRB2P62993 217 aaKnown RBP12.24□□□□□ -0.45
SUPT16H-208ENST00000557652 GALK2Q01415 458 aa12.24□□□□□ -0.45
SUPT16H-208ENST00000557652 RAB40BQ12829 278 aa12.24□□□□□ -0.45
SUPT16H-208ENST00000557652 MEP1BQ16820 701 aa12.24□□□□□ -0.45
SUPT16H-208ENST00000557652 KLHL22Q53GT1 634 aa12.24□□□□□ -0.45
SUPT16H-208ENST00000557652 DPY19L4Q7Z388 723 aa12.24□□□□□ -0.45
SUPT16H-208ENST00000557652 CDC20BQ86Y33 519 aa12.24□□□□□ -0.45
SUPT16H-208ENST00000557652 ZNF584Q8IVC4 421 aa12.24□□□□□ -0.45
SUPT16H-208ENST00000557652 OR2T27Q8NH04 317 aa12.24□□□□□ -0.45
SUPT16H-208ENST00000557652 ST7LQ8TDW4 575 aa12.24□□□□□ -0.45
SUPT16H-208ENST00000557652 RNF133Q8WVZ7 376 aa12.24□□□□□ -0.45
SUPT16H-208ENST00000557652 ITFG2Q969R8 447 aa12.24□□□□□ -0.45
SUPT16H-208ENST00000557652 SPTSSAQ969W0 71 aa12.24□□□□□ -0.45
SUPT16H-208ENST00000557652 POM121L2Q96KW2 1035 aa12.24□□□□□ -0.45
SUPT16H-208ENST00000557652 FOXN4Q96NZ1 517 aa12.24□□□□□ -0.45
SUPT16H-208ENST00000557652 ATF6BQ99941 703 aa12.24□□□□□ -0.45
SUPT16H-208ENST00000557652 BCL2L14Q9BZR8 327 aa12.24□□□□□ -0.45
SUPT16H-208ENST00000557652 INPP5EQ9NRR6 644 aa12.24□□□□□ -0.45
SUPT16H-208ENST00000557652 FAIMQ9NVQ4 179 aa12.24□□□□□ -0.45
SUPT16H-208ENST00000557652 DNAJC27Q9NZQ0 273 aa12.24□□□□□ -0.45
SUPT16H-208ENST00000557652 EIF3KQ9UBQ5 218 aaKnown RBP12.24□□□□□ -0.45
SUPT16H-208ENST00000557652 LAMP5Q9UJQ1 280 aa12.24□□□□□ -0.45
SUPT16H-208ENST00000557652 UTP20O75691 2785 aaKnown RBP12.24□□□□□ -0.45
SUPT16H-208ENST00000557652 UNC79Q9P2D8 2635 aa12.24□□□□□ -0.45
SUPT16H-208ENST00000557652 M0R129 80 aa12.23□□□□□ -0.45
SUPT16H-208ENST00000557652 RER1O15258 196 aa12.23□□□□□ -0.45
SUPT16H-208ENST00000557652 SIAH2O43255 324 aa12.23□□□□□ -0.45
SUPT16H-208ENST00000557652 ENTPD6O75354 484 aa12.23□□□□□ -0.45
SUPT16H-208ENST00000557652 ZNF254O75437 659 aa12.23□□□□□ -0.45
SUPT16H-208ENST00000557652 FADS2O95864 444 aaKnown RBP12.23□□□□□ -0.45
SUPT16H-208ENST00000557652 GPANK1O95872 356 aa12.23□□□□□ -0.45
SUPT16H-208ENST00000557652 PATE4P0C8F1 98 aa12.23□□□□□ -0.45
SUPT16H-208ENST00000557652 ALOX5APP20292 161 aa12.23□□□□□ -0.45
SUPT16H-208ENST00000557652 MYF6P23409 242 aa12.23□□□□□ -0.45
SUPT16H-208ENST00000557652 OTX1P32242 354 aaPredicted RBP12.23□□□□□ -0.45
SUPT16H-208ENST00000557652 DCTDP32321 178 aa12.23□□□□□ -0.45
SUPT16H-208ENST00000557652 HTR5AP47898 357 aa12.23□□□□□ -0.45
SUPT16H-208ENST00000557652 CCDC92Q53HC0 331 aaPredicted RBP12.23□□□□□ -0.45
SUPT16H-208ENST00000557652 ALKBH2Q6NS38 261 aa12.23□□□□□ -0.45
SUPT16H-208ENST00000557652 ZNF774Q6NX45 483 aa12.23□□□□□ -0.45
SUPT16H-208ENST00000557652 ZNF544Q6NX49 715 aa12.23□□□□□ -0.45
SUPT16H-208ENST00000557652 SLC22A25Q6T423 547 aa12.23□□□□□ -0.45
SUPT16H-208ENST00000557652 ZNF704Q6ZNC4 412 aaPredicted RBP12.23□□□□□ -0.45
SUPT16H-208ENST00000557652 DCXRQ7Z4W1 244 aa12.23□□□□□ -0.45
SUPT16H-208ENST00000557652 ZNF295-AS1Q8N0V1 137 aa12.23□□□□□ -0.45
SUPT16H-208ENST00000557652 CPEB3Q8NE35 698 aaKnown RBP12.23□□□□□ -0.45
SUPT16H-208ENST00000557652 HTRA1Q92743 480 aa12.23□□□□□ -0.45
SUPT16H-208ENST00000557652 ABHD6Q9BV23 337 aa12.23□□□□□ -0.45
SUPT16H-208ENST00000557652 CLEC4MQ9H2X3 399 aaPredicted RBP12.23□□□□□ -0.45
SUPT16H-208ENST00000557652 ZNF442Q9H7R0 627 aa12.23□□□□□ -0.45
SUPT16H-208ENST00000557652 ADGRL4Q9HBW9 690 aa12.23□□□□□ -0.45
SUPT16H-208ENST00000557652 PLCXD1Q9NUJ7 323 aa12.23□□□□□ -0.45
SUPT16H-208ENST00000557652 TBCCD1Q9NVR7 557 aa12.23□□□□□ -0.45
SUPT16H-208ENST00000557652 ARFGEF3Q5TH69 2177 aa12.22□□□□□ -0.45
SUPT16H-208ENST00000557652 SHISA9B4DS77 424 aa12.22□□□□□ -0.45
SUPT16H-208ENST00000557652 ZNF670-ZNF695F2Z2N8 137 aa12.22□□□□□ -0.45
SUPT16H-208ENST00000557652 NR4A1P22736 598 aa12.22□□□□□ -0.45
SUPT16H-208ENST00000557652 APEX1P27695 318 aaKnown RBP12.22□□□□□ -0.45
SUPT16H-208ENST00000557652 GLRXP35754 106 aa12.22□□□□□ -0.45
SUPT16H-208ENST00000557652 TPTEP56180 551 aa12.22□□□□□ -0.45
SUPT16H-208ENST00000557652 ROM1Q03395 351 aa12.22□□□□□ -0.45
SUPT16H-208ENST00000557652 EGR3Q06889 387 aa12.22□□□□□ -0.45
SUPT16H-208ENST00000557652 EIF2B1Q14232 305 aaKnown RBP12.22□□□□□ -0.45
SUPT16H-208ENST00000557652 KRTAP27-1Q3LI81 207 aa12.22□□□□□ -0.45
SUPT16H-208ENST00000557652 ZNF672Q499Z4 452 aaPredicted RBP12.22□□□□□ -0.45
SUPT16H-208ENST00000557652 C20orf204Q6ZNR8 217 aa12.22□□□□□ -0.45
SUPT16H-208ENST00000557652 CFAP77Q6ZQR2 320 aa12.22□□□□□ -0.45
SUPT16H-208ENST00000557652 KCTD20Q7Z5Y7 419 aa12.22□□□□□ -0.45
SUPT16H-208ENST00000557652 LINC00346Q8IVM7 164 aa12.22□□□□□ -0.45
SUPT16H-208ENST00000557652 SLC35F2Q8IXU6 374 aa12.22□□□□□ -0.45
SUPT16H-208ENST00000557652 AKR7LQ8NHP1 331 aa12.22□□□□□ -0.45
SUPT16H-208ENST00000557652 HAVCR2Q8TDQ0 301 aa12.22□□□□□ -0.45
SUPT16H-208ENST00000557652 UBE2FQ969M7 185 aa12.22□□□□□ -0.45
SUPT16H-208ENST00000557652 SLAMF6Q96DU3 332 aa12.22□□□□□ -0.45
SUPT16H-208ENST00000557652 MAP6Q96JE9 813 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms