RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 C1QTNF12Q5T7M4 302 aa13.25□□□□□ -0.29
NEDD1-213ENST00000557644 TMEM108Q6UXF1 575 aa13.25□□□□□ -0.29
NEDD1-213ENST00000557644 CDC20BQ86Y33 519 aa13.25□□□□□ -0.29
NEDD1-213ENST00000557644 PIAS4Q8N2W9 510 aaPredicted RBP13.25□□□□□ -0.29
NEDD1-213ENST00000557644 SLC30A7Q8NEW0 376 aa13.25□□□□□ -0.29
NEDD1-213ENST00000557644 TBX5Q99593 518 aa13.25□□□□□ -0.29
NEDD1-213ENST00000557644 ABHD6Q9BV23 337 aa13.25□□□□□ -0.29
NEDD1-213ENST00000557644 TACC2O95359 2948 aa13.25□□□□□ -0.29
NEDD1-213ENST00000557644 IQCMA0A1B0GVH7 501 aa13.25□□□□□ -0.29
NEDD1-213ENST00000557644 A6NNC1 897 aa13.25□□□□□ -0.29
NEDD1-213ENST00000557644 PLAUP00749 431 aa13.25□□□□□ -0.29
NEDD1-213ENST00000557644 DBHP09172 617 aa13.25□□□□□ -0.29
NEDD1-213ENST00000557644 CCNOP22674 350 aa13.25□□□□□ -0.29
NEDD1-213ENST00000557644 STOMP27105 288 aa13.25□□□□□ -0.29
NEDD1-213ENST00000557644 ATP6V1E1P36543 226 aa13.25□□□□□ -0.29
NEDD1-213ENST00000557644 HTR5AP47898 357 aa13.25□□□□□ -0.29
NEDD1-213ENST00000557644 NAAAQ02083 359 aa13.25□□□□□ -0.29
NEDD1-213ENST00000557644 DAZAP2Q15038 168 aaPredicted RBP13.25□□□□□ -0.29
NEDD1-213ENST00000557644 ZNF787Q6DD87 383 aa13.25□□□□□ -0.29
NEDD1-213ENST00000557644 ADAM5Q6NVV9 412 aa13.25□□□□□ -0.29
NEDD1-213ENST00000557644 ALDH16A1Q8IZ83 802 aa13.25□□□□□ -0.29
NEDD1-213ENST00000557644 ZNF295-AS1Q8N0V1 137 aa13.25□□□□□ -0.29
NEDD1-213ENST00000557644 THEM6Q8WUY1 208 aa13.25□□□□□ -0.29
NEDD1-213ENST00000557644 WACQ9BTA9 647 aa13.25□□□□□ -0.29
NEDD1-213ENST00000557644 C1orf198Q9H425 327 aa13.25□□□□□ -0.29
NEDD1-213ENST00000557644 ESRP2Q9H6T0 727 aaKnown RBP13.25□□□□□ -0.29
NEDD1-213ENST00000557644 SLC24A3Q9HC58 644 aa13.25□□□□□ -0.29
NEDD1-213ENST00000557644 XPNPEP2O43895 674 aa13.24□□□□□ -0.29
NEDD1-213ENST00000557644 PTAFRP25105 342 aa13.24□□□□□ -0.29
NEDD1-213ENST00000557644 ELFN2Q5R3F8 820 aa13.24□□□□□ -0.29
NEDD1-213ENST00000557644 SLC35F2Q8IXU6 374 aa13.24□□□□□ -0.29
NEDD1-213ENST00000557644 LGALS12Q96DT0 336 aa13.24□□□□□ -0.29
NEDD1-213ENST00000557644 SLAMF6Q96DU3 332 aa13.24□□□□□ -0.29
NEDD1-213ENST00000557644 YIPF3Q9GZM5 350 aa13.24□□□□□ -0.29
NEDD1-213ENST00000557644 MOV10Q9HCE1 1003 aaKnown RBP13.24□□□□□ -0.29
NEDD1-213ENST00000557644 LAMP5Q9UJQ1 280 aa13.24□□□□□ -0.29
NEDD1-213ENST00000557644 A0A1W2PPR1 153 aa13.24□□□□□ -0.29
NEDD1-213ENST00000557644 C5orf49A4QMS7 147 aa13.24□□□□□ -0.29
NEDD1-213ENST00000557644 OR6C6A6NF89 314 aa13.24□□□□□ -0.29
NEDD1-213ENST00000557644 SNTNA6NMZ2 147 aa13.24□□□□□ -0.29
NEDD1-213ENST00000557644 PRR32B1ATL7 298 aa13.24□□□□□ -0.29
NEDD1-213ENST00000557644 PSMD9O00233 223 aa13.24□□□□□ -0.29
NEDD1-213ENST00000557644 ALOX5APP20292 161 aa13.24□□□□□ -0.29
NEDD1-213ENST00000557644 TMED1Q13445 227 aa13.24□□□□□ -0.29
NEDD1-213ENST00000557644 RAB35Q15286 201 aa13.24□□□□□ -0.29
NEDD1-213ENST00000557644 C3orf36Q3SXR2 165 aa13.24□□□□□ -0.29
NEDD1-213ENST00000557644 OR1F12Q8NHA8 337 aa13.24□□□□□ -0.29
NEDD1-213ENST00000557644 POM121L2Q96KW2 1035 aa13.24□□□□□ -0.29
NEDD1-213ENST00000557644 CENPMQ9NSP4 180 aa13.24□□□□□ -0.29
NEDD1-213ENST00000557644 IGHV2OR16-5A0A0B4J2B6 119 aa13.23□□□□□ -0.29
NEDD1-213ENST00000557644 ATP6V1G2-DDX39BF2Z307 99 aa13.23□□□□□ -0.29
NEDD1-213ENST00000557644 MAGEB4O15481 346 aaPredicted RBP13.23□□□□□ -0.29
NEDD1-213ENST00000557644 LYNP07948 512 aa13.23□□□□□ -0.29
NEDD1-213ENST00000557644 PAX7P23759 505 aa13.23□□□□□ -0.29
NEDD1-213ENST00000557644 RSPO1Q2MKA7 263 aaPredicted RBP13.23□□□□□ -0.29
NEDD1-213ENST00000557644 SSX6Q7RTT6 188 aa13.23□□□□□ -0.29
NEDD1-213ENST00000557644 BPIFB6Q8NFQ5 453 aa13.23□□□□□ -0.29
NEDD1-213ENST00000557644 OR10H4Q8NGA5 316 aa13.23□□□□□ -0.29
NEDD1-213ENST00000557644 ATF6BQ99941 703 aa13.23□□□□□ -0.29
NEDD1-213ENST00000557644 MYRFQ9Y2G1 1151 aa13.23□□□□□ -0.29
NEDD1-213ENST00000557644 RPL36Q9Y3U8 105 aaKnown RBP13.23□□□□□ -0.29
NEDD1-213ENST00000557644 HEATR1Q9H583 2144 aaKnown RBP13.23□□□□□ -0.29
NEDD1-213ENST00000557644 ZNF35P13682 527 aa13.23□□□□□ -0.29
NEDD1-213ENST00000557644 APLNRP35414 380 aa13.23□□□□□ -0.29
NEDD1-213ENST00000557644 CXCR4P61073 352 aa13.23□□□□□ -0.29
NEDD1-213ENST00000557644 POU4F2Q12837 409 aa13.23□□□□□ -0.29
NEDD1-213ENST00000557644 SLC22A25Q6T423 547 aa13.23□□□□□ -0.29
NEDD1-213ENST00000557644 KBTBD8Q8NFY9 601 aa13.23□□□□□ -0.29
NEDD1-213ENST00000557644 NEUROG1Q92886 237 aa13.23□□□□□ -0.29
NEDD1-213ENST00000557644 RADILQ96JH8 1075 aa13.23□□□□□ -0.29
NEDD1-213ENST00000557644 HDHD2Q9H0R4 259 aa13.23□□□□□ -0.29
NEDD1-213ENST00000557644 A0A1W2PQL4 384 aaPredicted RBP13.22□□□□□ -0.29
NEDD1-213ENST00000557644 J3QRE1 110 aa13.22□□□□□ -0.29
NEDD1-213ENST00000557644 CRYAAP02489 173 aa13.22□□□□□ -0.29
NEDD1-213ENST00000557644 CD3EP07766 207 aa13.22□□□□□ -0.29
NEDD1-213ENST00000557644 ADRA2AP08913 450 aa13.22□□□□□ -0.29
NEDD1-213ENST00000557644 NR1H2P55055 460 aa13.22□□□□□ -0.29
NEDD1-213ENST00000557644 GALK2Q01415 458 aa13.22□□□□□ -0.29
NEDD1-213ENST00000557644 HGFACQ04756 655 aa13.22□□□□□ -0.29
NEDD1-213ENST00000557644 TBC1D28Q2M2D7 210 aa13.22□□□□□ -0.29
NEDD1-213ENST00000557644 C6orf141Q5SZD1 244 aa13.22□□□□□ -0.29
NEDD1-213ENST00000557644 ZNF454Q8N9F8 522 aa13.22□□□□□ -0.29
NEDD1-213ENST00000557644 RNF133Q8WVZ7 376 aa13.22□□□□□ -0.29
NEDD1-213ENST00000557644 MARVELD3Q96A59 401 aa13.22□□□□□ -0.29
NEDD1-213ENST00000557644 OR51B6Q9H340 312 aa13.22□□□□□ -0.29
NEDD1-213ENST00000557644 UBAP1Q9NZ09 502 aa13.22□□□□□ -0.29
NEDD1-213ENST00000557644 FBXL3Q9UKT7 428 aa13.22□□□□□ -0.29
NEDD1-213ENST00000557644 EXOGQ9Y2C4 368 aaKnown RBP13.22□□□□□ -0.29
NEDD1-213ENST00000557644 FAM221AA4D161 298 aa13.22□□□□□ -0.29
NEDD1-213ENST00000557644 SHISA9B4DS77 424 aa13.22□□□□□ -0.29
NEDD1-213ENST00000557644 F5H5K5 113 aa13.22□□□□□ -0.29
NEDD1-213ENST00000557644 CTAG2O75638 210 aa13.22□□□□□ -0.29
NEDD1-213ENST00000557644 PTHP01270 115 aa13.22□□□□□ -0.29
NEDD1-213ENST00000557644 SLC15A1P46059 708 aa13.22□□□□□ -0.29
NEDD1-213ENST00000557644 GDI2P50395 445 aaKnown RBP13.22□□□□□ -0.29
NEDD1-213ENST00000557644 LRRN1Q6UXK5 716 aa13.22□□□□□ -0.29
NEDD1-213ENST00000557644 OR52I1Q8NGK6 324 aa13.22□□□□□ -0.29
NEDD1-213ENST00000557644 COPS4Q9BT78 406 aa13.22□□□□□ -0.29
NEDD1-213ENST00000557644 DDX28Q9NUL7 540 aaKnown RBP13.22□□□□□ -0.29
NEDD1-213ENST00000557644 RNF115Q9Y4L5 304 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms