RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 FZR1Q9UM11 496 aa10.73□□□□□ -0.69
SLIRP-209ENST00000557342 LHFPL6Q9Y693 200 aa10.73□□□□□ -0.69
SLIRP-209ENST00000557342 CR1P17927 2039 aa10.72□□□□□ -0.69
SLIRP-209ENST00000557342 IGLV3-9A0A075B6K5 115 aa10.72□□□□□ -0.69
SLIRP-209ENST00000557342 OR6C6A6NF89 314 aa10.72□□□□□ -0.69
SLIRP-209ENST00000557342 G3V2T6 193 aa10.72□□□□□ -0.69
SLIRP-209ENST00000557342 RER1O15258 196 aa10.72□□□□□ -0.69
SLIRP-209ENST00000557342 ABHD16AO95870 558 aa10.72□□□□□ -0.69
SLIRP-209ENST00000557342 TFP02787 698 aa10.72□□□□□ -0.69
SLIRP-209ENST00000557342 MT-ND5P03915 603 aa10.72□□□□□ -0.69
SLIRP-209ENST00000557342 PAICSP22234 425 aaKnown RBP10.72□□□□□ -0.69
SLIRP-209ENST00000557342 FMO3P31513 532 aa10.72□□□□□ -0.69
SLIRP-209ENST00000557342 PYCR1P32322 319 aa10.72□□□□□ -0.69
SLIRP-209ENST00000557342 WNT5AP41221 380 aa10.72□□□□□ -0.69
SLIRP-209ENST00000557342 PDLIM4P50479 330 aa10.72□□□□□ -0.69
SLIRP-209ENST00000557342 PPP1CBP62140 327 aa10.72□□□□□ -0.69
SLIRP-209ENST00000557342 HIST1H3AP68431 136 aa10.72□□□□□ -0.69
SLIRP-209ENST00000557342 CDK5Q00535 292 aa10.72□□□□□ -0.69
SLIRP-209ENST00000557342 GINS1Q14691 196 aa10.72□□□□□ -0.69
SLIRP-209ENST00000557342 CCDC92Q53HC0 331 aaPredicted RBP10.72□□□□□ -0.69
SLIRP-209ENST00000557342 ELFN2Q5R3F8 820 aa10.72□□□□□ -0.69
SLIRP-209ENST00000557342 HIST2H3PS2Q5TEC6 136 aa10.72□□□□□ -0.69
SLIRP-209ENST00000557342 OTPQ5XKR4 325 aa10.72□□□□□ -0.69
SLIRP-209ENST00000557342 FAHD1Q6P587 224 aa10.72□□□□□ -0.69
SLIRP-209ENST00000557342 HIST2H3AQ71DI3 136 aa10.72□□□□□ -0.69
SLIRP-209ENST00000557342 ZDHHC13Q8IUH4 622 aa10.72□□□□□ -0.69
SLIRP-209ENST00000557342 ZNF101Q8IZC7 436 aa10.72□□□□□ -0.69
SLIRP-209ENST00000557342 PARP8Q8N3A8 854 aa10.72□□□□□ -0.69
SLIRP-209ENST00000557342 ABHD4Q8TB40 342 aa10.72□□□□□ -0.69
SLIRP-209ENST00000557342 SNX33Q8WV41 574 aa10.72□□□□□ -0.69
SLIRP-209ENST00000557342 FAM168AQ92567 244 aa10.72□□□□□ -0.69
SLIRP-209ENST00000557342 NMNAT2Q9BZQ4 307 aa10.72□□□□□ -0.69
SLIRP-209ENST00000557342 TBCCD1Q9NVR7 557 aa10.72□□□□□ -0.69
SLIRP-209ENST00000557342 ANKRD65E5RJM6 399 aa10.71□□□□□ -0.69
SLIRP-209ENST00000557342 J3QW42 95 aa10.71□□□□□ -0.69
SLIRP-209ENST00000557342 NDUFS8O00217 210 aa10.71□□□□□ -0.69
SLIRP-209ENST00000557342 IGHV3-13P01766 116 aa10.71□□□□□ -0.69
SLIRP-209ENST00000557342 SLC25A16P16260 332 aa10.71□□□□□ -0.69
SLIRP-209ENST00000557342 ZNF23P17027 643 aa10.71□□□□□ -0.69
SLIRP-209ENST00000557342 SPI1P17947 270 aa10.71□□□□□ -0.69
SLIRP-209ENST00000557342 GGT2P36268 569 aa10.71□□□□□ -0.69
SLIRP-209ENST00000557342 RGS6P49758 472 aa10.71□□□□□ -0.69
SLIRP-209ENST00000557342 ACTR3P61158 418 aa10.71□□□□□ -0.69
SLIRP-209ENST00000557342 ERVS71-1P61550 626 aa10.71□□□□□ -0.69
SLIRP-209ENST00000557342 ESRRGP62508 458 aa10.71□□□□□ -0.69
SLIRP-209ENST00000557342 ECH1Q13011 328 aa10.71□□□□□ -0.69
SLIRP-209ENST00000557342 NKPD1Q17RQ9 610 aa10.71□□□□□ -0.69
SLIRP-209ENST00000557342 MBNL2Q5VZF2 373 aaKnown RBP10.71□□□□□ -0.69
SLIRP-209ENST00000557342 SLC18B1Q6NT16 456 aa10.71□□□□□ -0.69
SLIRP-209ENST00000557342 ACSM5Q6NUN0 579 aa10.71□□□□□ -0.69
SLIRP-209ENST00000557342 ZFP1Q6P2D0 407 aa10.71□□□□□ -0.69
SLIRP-209ENST00000557342 CORO6Q6QEF8 472 aa10.71□□□□□ -0.69
SLIRP-209ENST00000557342 LRP11Q86VZ4 500 aa10.71□□□□□ -0.69
SLIRP-209ENST00000557342 IQCF1Q8N6M8 205 aa10.71□□□□□ -0.69
SLIRP-209ENST00000557342 ZNF525Q8N782 197 aa10.71□□□□□ -0.69
SLIRP-209ENST00000557342 OR9Q1Q8NGQ5 310 aa10.71□□□□□ -0.69
SLIRP-209ENST00000557342 SLC25A40Q8TBP6 338 aa10.71□□□□□ -0.69
SLIRP-209ENST00000557342 LRTOMTQ8WZ04 291 aa10.71□□□□□ -0.69
SLIRP-209ENST00000557342 MARS2Q96GW9 593 aaKnown RBP10.71□□□□□ -0.69
SLIRP-209ENST00000557342 PLEKHA8Q96JA3 519 aa10.71□□□□□ -0.69
SLIRP-209ENST00000557342 PITX2Q99697 317 aa10.71□□□□□ -0.69
SLIRP-209ENST00000557342 REG4Q9BYZ8 158 aa10.71□□□□□ -0.69
SLIRP-209ENST00000557342 GABARAPL1Q9H0R8 117 aa10.71□□□□□ -0.69
SLIRP-209ENST00000557342 SLC25A19Q9HC21 320 aa10.71□□□□□ -0.69
SLIRP-209ENST00000557342 MRPL22Q9NWU5 206 aaKnown RBP10.71□□□□□ -0.69
SLIRP-209ENST00000557342 TAAR3PQ9P1P4 343 aa10.71□□□□□ -0.69
SLIRP-209ENST00000557342 CYB5R1Q9UHQ9 305 aa10.71□□□□□ -0.69
SLIRP-209ENST00000557342 ENOPH1Q9UHY7 261 aa10.71□□□□□ -0.69
SLIRP-209ENST00000557342 GRIP1Q9Y3R0 1128 aa10.71□□□□□ -0.69
SLIRP-209ENST00000557342 TEP1Q99973 2627 aaKnown RBP10.7□□□□□ -0.7
SLIRP-209ENST00000557342 LOC390937A0A1W2PQ73 354 aa10.7□□□□□ -0.7
SLIRP-209ENST00000557342 RNF223E7ERA6 249 aa10.7□□□□□ -0.7
SLIRP-209ENST00000557342 PRR23D1E9PI22 279 aaPredicted RBP10.7□□□□□ -0.7
SLIRP-209ENST00000557342 SMAD7O15105 426 aaKnown RBP10.7□□□□□ -0.7
SLIRP-209ENST00000557342 SURF4O15260 269 aa10.7□□□□□ -0.7
SLIRP-209ENST00000557342 CLPTM1O96005 669 aa10.7□□□□□ -0.7
SLIRP-209ENST00000557342 NGFP01138 241 aa10.7□□□□□ -0.7
SLIRP-209ENST00000557342 GYPBP06028 91 aa10.7□□□□□ -0.7
SLIRP-209ENST00000557342 PRR23D2P0DMB1 279 aaPredicted RBP10.7□□□□□ -0.7
SLIRP-209ENST00000557342 LIPAP38571 399 aa10.7□□□□□ -0.7
SLIRP-209ENST00000557342 ALDH3B1P43353 468 aa10.7□□□□□ -0.7
SLIRP-209ENST00000557342 DAPP51397 102 aa10.7□□□□□ -0.7
SLIRP-209ENST00000557342 CRISP1P54107 249 aa10.7□□□□□ -0.7
SLIRP-209ENST00000557342 KPNB1Q14974 876 aaKnown RBP10.7□□□□□ -0.7
SLIRP-209ENST00000557342 TEX30Q5JUR7 227 aa10.7□□□□□ -0.7
SLIRP-209ENST00000557342 RFPL4BQ6ZWI9 263 aa10.7□□□□□ -0.7
SLIRP-209ENST00000557342 AMIGO2Q86SJ2 522 aa10.7□□□□□ -0.7
SLIRP-209ENST00000557342 LINC00346Q8IVM7 164 aa10.7□□□□□ -0.7
SLIRP-209ENST00000557342 ZCCHC24Q8N2G6 241 aaKnown RBP10.7□□□□□ -0.7
SLIRP-209ENST00000557342 CIARTQ8N365 385 aaPredicted RBP10.7□□□□□ -0.7
SLIRP-209ENST00000557342 OR51L1Q8NGJ5 315 aa10.7□□□□□ -0.7
SLIRP-209ENST00000557342 OR5L1Q8NGL2 311 aa10.7□□□□□ -0.7
SLIRP-209ENST00000557342 OR6K6Q8NGW6 343 aa10.7□□□□□ -0.7
SLIRP-209ENST00000557342 KLF14Q8TD94 323 aaPredicted RBP10.7□□□□□ -0.7
SLIRP-209ENST00000557342 OTULINQ96BN8 352 aa10.7□□□□□ -0.7
SLIRP-209ENST00000557342 CENPNQ96H22 339 aaPredicted RBP10.7□□□□□ -0.7
SLIRP-209ENST00000557342 ATF6BQ99941 703 aa10.7□□□□□ -0.7
SLIRP-209ENST00000557342 OSBPL10Q9BXB5 764 aa10.7□□□□□ -0.7
SLIRP-209ENST00000557342 PRRG3Q9BZD7 231 aa10.7□□□□□ -0.7
SLIRP-209ENST00000557342 OR2J1Q9GZK6 312 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms