RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 NDUFB2O95178 105 aa13.41□□□□□ -0.26
TUBB3-213ENST00000557262 CTLA4P16410 223 aa13.41□□□□□ -0.26
TUBB3-213ENST00000557262 ZFP36P26651 326 aaKnown RBP13.41□□□□□ -0.26
TUBB3-213ENST00000557262 LSM6P62312 80 aaKnown RBP13.41□□□□□ -0.26
TUBB3-213ENST00000557262 AQP6Q13520 282 aa13.41□□□□□ -0.26
TUBB3-213ENST00000557262 C8orf82Q6P1X6 216 aaPredicted RBP13.41□□□□□ -0.26
TUBB3-213ENST00000557262 HACD2Q6Y1H2 254 aa13.41□□□□□ -0.26
TUBB3-213ENST00000557262 Q6ZR03 302 aa13.41□□□□□ -0.26
TUBB3-213ENST00000557262 LRRC28Q86X40 367 aaPredicted RBP13.41□□□□□ -0.26
TUBB3-213ENST00000557262 GLB1L2Q8IW92 636 aa13.41□□□□□ -0.26
TUBB3-213ENST00000557262 BPIFB2Q8N4F0 458 aa13.41□□□□□ -0.26
TUBB3-213ENST00000557262 KLHL36Q8N4N3 616 aa13.41□□□□□ -0.26
TUBB3-213ENST00000557262 ZNF283Q8N7M2 679 aa13.41□□□□□ -0.26
TUBB3-213ENST00000557262 C3orf56Q8N813 242 aa13.41□□□□□ -0.26
TUBB3-213ENST00000557262 FAM162AQ96A26 154 aa13.41□□□□□ -0.26
TUBB3-213ENST00000557262 FAM46AQ96IP4 442 aaKnown RBP13.41□□□□□ -0.26
TUBB3-213ENST00000557262 SLC6A7Q99884 636 aa13.41□□□□□ -0.26
TUBB3-213ENST00000557262 PLA2G12AQ9BZM1 189 aa13.41□□□□□ -0.26
TUBB3-213ENST00000557262 RERGLQ9H628 205 aa13.41□□□□□ -0.26
TUBB3-213ENST00000557262 NRIP3Q9NQ35 241 aa13.41□□□□□ -0.26
TUBB3-213ENST00000557262 SIGLEC7Q9Y286 467 aa13.41□□□□□ -0.26
TUBB3-213ENST00000557262 COA3Q9Y2R0 106 aaPredicted RBP13.41□□□□□ -0.26
TUBB3-213ENST00000557262 FAM32AQ9Y421 112 aaKnown RBP13.41□□□□□ -0.26
TUBB3-213ENST00000557262 TENM1Q9UKZ4 2725 aa13.41□□□□□ -0.26
TUBB3-213ENST00000557262 A0A1W2PRQ8 180 aa13.4□□□□□ -0.26
TUBB3-213ENST00000557262 FSHBP01225 129 aa13.4□□□□□ -0.26
TUBB3-213ENST00000557262 H1F0P07305 194 aaKnown RBP13.4□□□□□ -0.26
TUBB3-213ENST00000557262 RAC2P15153 192 aa13.4□□□□□ -0.26
TUBB3-213ENST00000557262 NCK1P16333 377 aa13.4□□□□□ -0.26
TUBB3-213ENST00000557262 SDHAP31040 664 aa13.4□□□□□ -0.26
TUBB3-213ENST00000557262 KRR1Q13601 381 aaKnown RBP13.4□□□□□ -0.26
TUBB3-213ENST00000557262 DGCR6Q14129 220 aa13.4□□□□□ -0.26
TUBB3-213ENST00000557262 TMEM155Q4W5P6 130 aa13.4□□□□□ -0.26
TUBB3-213ENST00000557262 C1orf94Q6P1W5 598 aa13.4□□□□□ -0.26
TUBB3-213ENST00000557262 SPICQ8N5J4 248 aa13.4□□□□□ -0.26
TUBB3-213ENST00000557262 OR1F12Q8NHA8 337 aa13.4□□□□□ -0.26
TUBB3-213ENST00000557262 SLC7A6Q92536 515 aa13.4□□□□□ -0.26
TUBB3-213ENST00000557262 RASD2Q96D21 266 aa13.4□□□□□ -0.26
TUBB3-213ENST00000557262 KCTD14Q9BQ13 255 aaPredicted RBP13.4□□□□□ -0.26
TUBB3-213ENST00000557262 SYT4Q9H2B2 425 aa13.4□□□□□ -0.26
TUBB3-213ENST00000557262 NTN4Q9HB63 628 aa13.4□□□□□ -0.26
TUBB3-213ENST00000557262 PATZ1Q9HBE1 687 aaKnown RBP13.4□□□□□ -0.26
TUBB3-213ENST00000557262 VSX1Q9NZR4 365 aaPredicted RBP13.4□□□□□ -0.26
TUBB3-213ENST00000557262 ASH2LQ9UBL3 628 aa13.4□□□□□ -0.26
TUBB3-213ENST00000557262 RPS6KA6Q9UK32 745 aa13.4□□□□□ -0.26
TUBB3-213ENST00000557262 PPP1R3CQ9UQK1 317 aa13.4□□□□□ -0.26
TUBB3-213ENST00000557262 POLR3KQ9Y2Y1 108 aaPredicted RBP13.4□□□□□ -0.26
TUBB3-213ENST00000557262 ARHGAP32A7KAX9 2087 aa13.4□□□□□ -0.27
TUBB3-213ENST00000557262 J3QW42 95 aa13.39□□□□□ -0.27
TUBB3-213ENST00000557262 RHCEP18577 417 aa13.39□□□□□ -0.27
TUBB3-213ENST00000557262 OMPP47874 163 aa13.39□□□□□ -0.27
TUBB3-213ENST00000557262 SLC6A9P48067 706 aa13.39□□□□□ -0.27
TUBB3-213ENST00000557262 HNRNPA0Q13151 305 aaKnown RBP13.39□□□□□ -0.27
TUBB3-213ENST00000557262 KCNMB1Q16558 191 aa13.39□□□□□ -0.27
TUBB3-213ENST00000557262 CCDC92Q53HC0 331 aaPredicted RBP13.39□□□□□ -0.27
TUBB3-213ENST00000557262 OTPQ5XKR4 325 aa13.39□□□□□ -0.27
TUBB3-213ENST00000557262 DPY19L2P2Q6ZN68 376 aa13.39□□□□□ -0.27
TUBB3-213ENST00000557262 ZDHHC22Q8N966 263 aa13.39□□□□□ -0.27
TUBB3-213ENST00000557262 OR5L1Q8NGL2 311 aa13.39□□□□□ -0.27
TUBB3-213ENST00000557262 ITLN1Q8WWA0 313 aa13.39□□□□□ -0.27
TUBB3-213ENST00000557262 DVL3Q92997 716 aaPredicted RBP13.39□□□□□ -0.27
TUBB3-213ENST00000557262 POP5Q969H6 163 aaKnown RBP13.39□□□□□ -0.27
TUBB3-213ENST00000557262 GPX7Q96SL4 187 aaPredicted RBP13.39□□□□□ -0.27
TUBB3-213ENST00000557262 NUAK2Q9H093 628 aa13.39□□□□□ -0.27
TUBB3-213ENST00000557262 MMP26Q9NRE1 261 aa13.39□□□□□ -0.27
TUBB3-213ENST00000557262 NDUFAF4Q9P032 175 aa13.39□□□□□ -0.27
TUBB3-213ENST00000557262 AURKCQ9UQB9 309 aa13.39□□□□□ -0.27
TUBB3-213ENST00000557262 IER3IP1Q9Y5U9 82 aa13.39□□□□□ -0.27
TUBB3-213ENST00000557262 DYSFO75923 2080 aa13.39□□□□□ -0.27
TUBB3-213ENST00000557262 OR6C6A6NF89 314 aa13.38□□□□□ -0.27
TUBB3-213ENST00000557262 TRAPPC2LH3BP13 241 aa13.38□□□□□ -0.27
TUBB3-213ENST00000557262 SOCS2O14508 198 aa13.38□□□□□ -0.27
TUBB3-213ENST00000557262 RER1O15258 196 aa13.38□□□□□ -0.27
TUBB3-213ENST00000557262 RBMXP38159 391 aaKnown RBP13.38□□□□□ -0.27
TUBB3-213ENST00000557262 CDKN2AP42771 156 aaKnown RBP13.38□□□□□ -0.27
TUBB3-213ENST00000557262 RGS6P49758 472 aa13.38□□□□□ -0.27
TUBB3-213ENST00000557262 NUDT2P50583 147 aa13.38□□□□□ -0.27
TUBB3-213ENST00000557262 RPS6KA3P51812 740 aa13.38□□□□□ -0.27
TUBB3-213ENST00000557262 BTG1P62324 171 aa13.38□□□□□ -0.27
TUBB3-213ENST00000557262 FGD3Q5JSP0 725 aa13.38□□□□□ -0.27
TUBB3-213ENST00000557262 GLYATQ6IB77 296 aa13.38□□□□□ -0.27
TUBB3-213ENST00000557262 SLC27A4Q6P1M0 643 aa13.38□□□□□ -0.27
TUBB3-213ENST00000557262 ADCK1Q86TW2 530 aa13.38□□□□□ -0.27
TUBB3-213ENST00000557262 ATG16L2Q8NAA4 619 aa13.38□□□□□ -0.27
TUBB3-213ENST00000557262 DEFB108BQ8NET1 73 aa13.38□□□□□ -0.27
TUBB3-213ENST00000557262 C22orf15Q8WYQ4 148 aa13.38□□□□□ -0.27
TUBB3-213ENST00000557262 RSRC1Q96IZ7 334 aaKnown RBP13.38□□□□□ -0.27
TUBB3-213ENST00000557262 OR2V2Q96R30 315 aa13.38□□□□□ -0.27
TUBB3-213ENST00000557262 SIGLEC11Q96RL6 698 aa13.38□□□□□ -0.27
TUBB3-213ENST00000557262 KRCC1Q9NPI7 259 aaPredicted RBP13.38□□□□□ -0.27
TUBB3-213ENST00000557262 DDX28Q9NUL7 540 aaKnown RBP13.38□□□□□ -0.27
TUBB3-213ENST00000557262 IL20RAQ9UHF4 553 aa13.38□□□□□ -0.27
TUBB3-213ENST00000557262 ATPIF1Q9UII2 106 aa13.38□□□□□ -0.27
TUBB3-213ENST00000557262 AUP1Q9Y679 476 aa13.38□□□□□ -0.27
TUBB3-213ENST00000557262 TANC2Q9HCD6 1990 aa13.38□□□□□ -0.27
TUBB3-213ENST00000557262 UNC119BA6NIH7 251 aa13.37□□□□□ -0.27
TUBB3-213ENST00000557262 TMEM178BH3BS89 294 aa13.37□□□□□ -0.27
TUBB3-213ENST00000557262 IFNL4K9M1U5 179 aa13.37□□□□□ -0.27
TUBB3-213ENST00000557262 IMPA2O14732 288 aa13.37□□□□□ -0.27
TUBB3-213ENST00000557262 TXNDC12O95881 172 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms