RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 CRYGBP07316 175 aa4.52□□□□□ -1.69
SRP54-211ENST00000556445 SP9P0CG40 484 aa4.52□□□□□ -1.69
SRP54-211ENST00000556445 DBTP11182 482 aaKnown RBP4.52□□□□□ -1.69
SRP54-211ENST00000556445 NELFEP18615 380 aaKnown RBP4.52□□□□□ -1.69
SRP54-211ENST00000556445 CBLP22681 906 aa4.52□□□□□ -1.69
SRP54-211ENST00000556445 DCKP27707 260 aa4.52□□□□□ -1.69
SRP54-211ENST00000556445 ELK4P28324 431 aa4.52□□□□□ -1.69
SRP54-211ENST00000556445 LCN1P31025 176 aa4.52□□□□□ -1.69
SRP54-211ENST00000556445 PIGAP37287 484 aa4.52□□□□□ -1.69
SRP54-211ENST00000556445 GPR12P47775 334 aa4.52□□□□□ -1.69
SRP54-211ENST00000556445 TNFSF10P50591 281 aa4.52□□□□□ -1.69
SRP54-211ENST00000556445 CRISP1P54107 249 aa4.52□□□□□ -1.69
SRP54-211ENST00000556445 RGS8P57771 180 aaPredicted RBP4.52□□□□□ -1.69
SRP54-211ENST00000556445 TAS2R41P59536 307 aa4.52□□□□□ -1.69
SRP54-211ENST00000556445 CSNK2A1P68400 391 aaPredicted RBP4.52□□□□□ -1.69
SRP54-211ENST00000556445 PSPHP78330 225 aa4.52□□□□□ -1.69
SRP54-211ENST00000556445 IGLV3-21P80748 117 aaPredicted RBP4.52□□□□□ -1.69
SRP54-211ENST00000556445 UBE2V1Q13404 147 aa4.52□□□□□ -1.69
SRP54-211ENST00000556445 MAD2L1BPQ15013 274 aaPredicted RBP4.52□□□□□ -1.69
SRP54-211ENST00000556445 DEFB133Q30KQ1 61 aa4.52□□□□□ -1.69
SRP54-211ENST00000556445 FHL5Q5TD97 284 aa4.52□□□□□ -1.69
SRP54-211ENST00000556445 RAET1LQ5VY80 246 aa4.52□□□□□ -1.69
SRP54-211ENST00000556445 WDR74Q6RFH5 385 aaPredicted RBP4.52□□□□□ -1.69
SRP54-211ENST00000556445 CASP12Q6UXS9 341 aa4.52□□□□□ -1.69
SRP54-211ENST00000556445 COLCA1Q6ZS62 124 aa4.52□□□□□ -1.69
SRP54-211ENST00000556445 PRSS48Q7RTY5 328 aa4.52□□□□□ -1.69
SRP54-211ENST00000556445 TSEN54Q7Z6J9 526 aaKnown RBP4.52□□□□□ -1.69
SRP54-211ENST00000556445 UEVLDQ8IX04 471 aa4.52□□□□□ -1.69
SRP54-211ENST00000556445 CCDC36Q8IYA8 594 aa4.52□□□□□ -1.69
SRP54-211ENST00000556445 RNF113BQ8IZP6 322 aaKnown RBP4.52□□□□□ -1.69
SRP54-211ENST00000556445 HS3ST5Q8IZT8 346 aa4.52□□□□□ -1.69
SRP54-211ENST00000556445 DEFB123Q8N688 67 aa4.52□□□□□ -1.69
SRP54-211ENST00000556445 SLC5A8Q8N695 610 aa4.52□□□□□ -1.69
SRP54-211ENST00000556445 COX18Q8N8Q8 333 aa4.52□□□□□ -1.69
SRP54-211ENST00000556445 AQP11Q8NBQ7 271 aa4.52□□□□□ -1.69
SRP54-211ENST00000556445 SLC38A9Q8NBW4 561 aa4.52□□□□□ -1.69
SRP54-211ENST00000556445 CSNK2A3Q8NEV1 391 aa4.52□□□□□ -1.69
SRP54-211ENST00000556445 BPIFB6Q8NFQ5 453 aa4.52□□□□□ -1.69
SRP54-211ENST00000556445 OR7G2Q8NG99 324 aa4.52□□□□□ -1.69
SRP54-211ENST00000556445 GPR32P1Q8NGA4 272 aa4.52□□□□□ -1.69
SRP54-211ENST00000556445 OR4C5Q8NGB2 326 aa4.52□□□□□ -1.69
SRP54-211ENST00000556445 OR5D16Q8NGK9 328 aa4.52□□□□□ -1.69
SRP54-211ENST00000556445 OR52P1PQ8NH57 321 aa4.52□□□□□ -1.69
SRP54-211ENST00000556445 RHOXF1Q8NHV9 184 aa4.52□□□□□ -1.69
SRP54-211ENST00000556445 ANGPTL6Q8NI99 470 aa4.52□□□□□ -1.69
SRP54-211ENST00000556445 PIGXQ8TBF5 258 aa4.52□□□□□ -1.69
SRP54-211ENST00000556445 GNPDA2Q8TDQ7 276 aa4.52□□□□□ -1.69
SRP54-211ENST00000556445 GRHL3Q8TE85 626 aa4.52□□□□□ -1.69
SRP54-211ENST00000556445 RAB2BQ8WUD1 216 aa4.52□□□□□ -1.69
SRP54-211ENST00000556445 PIGCQ92535 297 aa4.52□□□□□ -1.69
SRP54-211ENST00000556445 RORBQ92753 470 aa4.52□□□□□ -1.69
SRP54-211ENST00000556445 NAT6Q93015 286 aa4.52□□□□□ -1.69
SRP54-211ENST00000556445 SENP5Q96HI0 755 aaPredicted RBP4.52□□□□□ -1.69
SRP54-211ENST00000556445 ZNF582Q96NG8 517 aaPredicted RBP4.52□□□□□ -1.69
SRP54-211ENST00000556445 GUCD1Q96NT3 240 aa4.52□□□□□ -1.69
SRP54-211ENST00000556445 CSF3RQ99062 836 aa4.52□□□□□ -1.69
SRP54-211ENST00000556445 ARHGDIGQ99819 225 aa4.52□□□□□ -1.69
SRP54-211ENST00000556445 RACGAP1Q9H0H5 632 aa4.52□□□□□ -1.69
SRP54-211ENST00000556445 RBM38Q9H0Z9 239 aaKnown RBP4.52□□□□□ -1.69
SRP54-211ENST00000556445 DUSP21Q9H596 190 aa4.52□□□□□ -1.69
SRP54-211ENST00000556445 ESRP2Q9H6T0 727 aaKnown RBP4.52□□□□□ -1.69
SRP54-211ENST00000556445 CXorf21Q9HAI6 301 aa4.52□□□□□ -1.69
SRP54-211ENST00000556445 ZNF160Q9HCG1 818 aa4.52□□□□□ -1.69
SRP54-211ENST00000556445 ADAP2Q9NPF8 381 aa4.52□□□□□ -1.69
SRP54-211ENST00000556445 PRTFDC1Q9NRG1 225 aa4.52□□□□□ -1.69
SRP54-211ENST00000556445 C2orf42Q9NWW7 574 aa4.52□□□□□ -1.69
SRP54-211ENST00000556445 NLGN3Q9NZ94 848 aa4.52□□□□□ -1.69
SRP54-211ENST00000556445 MAT2BQ9NZL9 334 aa4.52□□□□□ -1.69
SRP54-211ENST00000556445 PRODH2Q9UF12 536 aa4.52□□□□□ -1.69
SRP54-211ENST00000556445 PSORS1C1Q9UIG5 152 aa4.52□□□□□ -1.69
SRP54-211ENST00000556445 MRTO4Q9UKD2 239 aaKnown RBP4.52□□□□□ -1.69
SRP54-211ENST00000556445 PIGLQ9Y2B2 252 aa4.52□□□□□ -1.69
SRP54-211ENST00000556445 CBY1Q9Y3M2 126 aa4.52□□□□□ -1.69
SRP54-211ENST00000556445 RHBDD3Q9Y3P4 386 aa4.52□□□□□ -1.69
SRP54-211ENST00000556445 THADAQ6YHU6 1953 aa4.52□□□□□ -1.69
SRP54-211ENST00000556445 SPAG17Q6Q759 2223 aa4.52□□□□□ -1.69
SRP54-211ENST00000556445 MN1Q10571 1320 aaPredicted RBP4.51□□□□□ -1.69
SRP54-211ENST00000556445 IGHV1OR21-1A0A087WYE8 117 aa4.51□□□□□ -1.69
SRP54-211ENST00000556445 TRAV24A0A0B4J272 114 aa4.51□□□□□ -1.69
SRP54-211ENST00000556445 A0A1B0GVT2 93 aa4.51□□□□□ -1.69
SRP54-211ENST00000556445 A0A1W2PPV4 95 aa4.51□□□□□ -1.69
SRP54-211ENST00000556445 SH3PXD2BA1X283 911 aa4.51□□□□□ -1.69
SRP54-211ENST00000556445 TRAPPC13A5PLN9 417 aa4.51□□□□□ -1.69
SRP54-211ENST00000556445 RNF222A6NCQ9 220 aa4.51□□□□□ -1.69
SRP54-211ENST00000556445 ZNF860A6NHJ4 632 aa4.51□□□□□ -1.69
SRP54-211ENST00000556445 CD8B2A6NJW9 211 aa4.51□□□□□ -1.69
SRP54-211ENST00000556445 ZNF99A8MXY4 864 aaPredicted RBP4.51□□□□□ -1.69
SRP54-211ENST00000556445 H3BSA7 217 aa4.51□□□□□ -1.69
SRP54-211ENST00000556445 SGK494L7N484 410 aa4.51□□□□□ -1.69
SRP54-211ENST00000556445 KIAA0513O60268 411 aa4.51□□□□□ -1.69
SRP54-211ENST00000556445 LDB3O75112 727 aa4.51□□□□□ -1.69
SRP54-211ENST00000556445 RDH16O75452 317 aa4.51□□□□□ -1.69
SRP54-211ENST00000556445 TRMUO75648 421 aaKnown RBP4.51□□□□□ -1.69
SRP54-211ENST00000556445 OR2B3O76000 313 aa4.51□□□□□ -1.69
SRP54-211ENST00000556445 HBQ1P09105 142 aa4.51□□□□□ -1.69
SRP54-211ENST00000556445 ACP2P11117 423 aa4.51□□□□□ -1.69
SRP54-211ENST00000556445 PIPP12273 146 aaPredicted RBP4.51□□□□□ -1.69
SRP54-211ENST00000556445 POU2F1P14859 743 aa4.51□□□□□ -1.69
SRP54-211ENST00000556445 CPN1P15169 458 aa4.51□□□□□ -1.69
SRP54-211ENST00000556445 ZNF24P17028 368 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms