RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 SIGLEC5O15389 551 aa4.61□□□□□ -1.67
TMEM260-210ENST00000556422 CDC40O60508 579 aaKnown RBP eCLIP4.61□□□□□ -1.67
TMEM260-210ENST00000556422 METTL15P1P0C7V9 234 aa4.61□□□□□ -1.67
TMEM260-210ENST00000556422 TRAPPC2P0DI81 140 aa4.61□□□□□ -1.67
TMEM260-210ENST00000556422 TRAPPC2BP0DI82 140 aa4.61□□□□□ -1.67
TMEM260-210ENST00000556422 SRFP11831 508 aa4.61□□□□□ -1.67
TMEM260-210ENST00000556422 ANXA3P12429 323 aa4.61□□□□□ -1.67
TMEM260-210ENST00000556422 CPN1P15169 458 aa4.61□□□□□ -1.67
TMEM260-210ENST00000556422 PNLIPP16233 465 aa4.61□□□□□ -1.67
TMEM260-210ENST00000556422 S1PR1P21453 382 aa4.61□□□□□ -1.67
TMEM260-210ENST00000556422 UCP1P25874 307 aa4.61□□□□□ -1.67
TMEM260-210ENST00000556422 CRYBA4P53673 196 aa4.61□□□□□ -1.67
TMEM260-210ENST00000556422 FXYD6P3P58550 94 aa4.61□□□□□ -1.67
TMEM260-210ENST00000556422 TAS2R41P59536 307 aa4.61□□□□□ -1.67
TMEM260-210ENST00000556422 MAB21L1Q13394 359 aa4.61□□□□□ -1.67
TMEM260-210ENST00000556422 GINS1Q14691 196 aa4.61□□□□□ -1.67
TMEM260-210ENST00000556422 EXOSC7Q15024 291 aaKnown RBP4.61□□□□□ -1.67
TMEM260-210ENST00000556422 C4orf17Q53FE4 359 aa4.61□□□□□ -1.67
TMEM260-210ENST00000556422 TMEM177Q53S58 311 aa4.61□□□□□ -1.67
TMEM260-210ENST00000556422 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.61□□□□□ -1.67
TMEM260-210ENST00000556422 TEX261Q6UWH6 196 aa4.61□□□□□ -1.67
TMEM260-210ENST00000556422 ZNF367Q7RTV3 350 aa4.61□□□□□ -1.67
TMEM260-210ENST00000556422 GDF7Q7Z4P5 450 aa4.61□□□□□ -1.67
TMEM260-210ENST00000556422 LYSMD2Q8IV50 215 aa4.61□□□□□ -1.67
TMEM260-210ENST00000556422 OR9K2Q8NGE7 335 aa4.61□□□□□ -1.67
TMEM260-210ENST00000556422 SLC7A6Q92536 515 aa4.61□□□□□ -1.67
TMEM260-210ENST00000556422 RERGQ96A58 199 aaPredicted RBP4.61□□□□□ -1.67
TMEM260-210ENST00000556422 ARSGQ96EG1 525 aa4.61□□□□□ -1.67
TMEM260-210ENST00000556422 CDX2Q99626 313 aaPredicted RBP4.61□□□□□ -1.67
TMEM260-210ENST00000556422 C1QTNF6Q9BXI9 259 aa4.61□□□□□ -1.67
TMEM260-210ENST00000556422 NXF2Q9GZY0 626 aaKnown RBP4.61□□□□□ -1.67
TMEM260-210ENST00000556422 GPN1Q9HCN4 374 aaPredicted RBP4.61□□□□□ -1.67
TMEM260-210ENST00000556422 DNAJC4Q9NNZ3 241 aa4.61□□□□□ -1.67
TMEM260-210ENST00000556422 KLHL28Q9NXS3 571 aa4.61□□□□□ -1.67
TMEM260-210ENST00000556422 TVP23BQ9NYZ1 205 aa4.61□□□□□ -1.67
TMEM260-210ENST00000556422 CALML5Q9NZT1 146 aa4.61□□□□□ -1.67
TMEM260-210ENST00000556422 EPHA6Q9UF33 1036 aa4.61□□□□□ -1.67
TMEM260-210ENST00000556422 HSF4Q9ULV5 492 aa4.61□□□□□ -1.67
TMEM260-210ENST00000556422 SLC6A5Q9Y345 797 aa4.61□□□□□ -1.67
TMEM260-210ENST00000556422 U3KQ87 197 aa4.61□□□□□ -1.67
TMEM260-210ENST00000556422 C17orf105B2RV13 164 aa4.61□□□□□ -1.67
TMEM260-210ENST00000556422 B4DGG1 531 aa4.61□□□□□ -1.67
TMEM260-210ENST00000556422 C3orf80F5H4A9 247 aa4.61□□□□□ -1.67
TMEM260-210ENST00000556422 HRKO00198 91 aa4.61□□□□□ -1.67
TMEM260-210ENST00000556422 LGALS8O00214 317 aa4.61□□□□□ -1.67
TMEM260-210ENST00000556422 KIAA0513O60268 411 aa4.61□□□□□ -1.67
TMEM260-210ENST00000556422 RDH16O75452 317 aa4.61□□□□□ -1.67
TMEM260-210ENST00000556422 LYPD3O95274 346 aa4.61□□□□□ -1.67
TMEM260-210ENST00000556422 GPR75O95800 540 aa4.61□□□□□ -1.67
TMEM260-210ENST00000556422 SPNP16150 400 aa4.61□□□□□ -1.67
TMEM260-210ENST00000556422 CNR1P21554 472 aa4.61□□□□□ -1.67
TMEM260-210ENST00000556422 CD82P27701 267 aa4.61□□□□□ -1.67
TMEM260-210ENST00000556422 CD200P41217 278 aa4.61□□□□□ -1.67
TMEM260-210ENST00000556422 SOX3P41225 446 aa4.61□□□□□ -1.67
TMEM260-210ENST00000556422 EXT1Q16394 746 aa4.61□□□□□ -1.67
TMEM260-210ENST00000556422 DCST2Q5T1A1 773 aa4.61□□□□□ -1.67
TMEM260-210ENST00000556422 CASP12Q6UXS9 341 aa4.61□□□□□ -1.67
TMEM260-210ENST00000556422 SLC29A4Q7RTT9 530 aa4.61□□□□□ -1.67
TMEM260-210ENST00000556422 OOSP2Q86WS3 158 aa4.61□□□□□ -1.67
TMEM260-210ENST00000556422 LINC00471Q8N535 108 aa4.61□□□□□ -1.67
TMEM260-210ENST00000556422 HSD17B11Q8NBQ5 300 aa4.61□□□□□ -1.67
TMEM260-210ENST00000556422 OR5L2Q8NGL0 311 aa4.61□□□□□ -1.67
TMEM260-210ENST00000556422 OR9A4Q8NGU2 314 aa4.61□□□□□ -1.67
TMEM260-210ENST00000556422 CREB3L1Q96BA8 519 aa4.61□□□□□ -1.67
TMEM260-210ENST00000556422 PGAM5Q96HS1 289 aa4.61□□□□□ -1.67
TMEM260-210ENST00000556422 ZNF582Q96NG8 517 aaPredicted RBP4.61□□□□□ -1.67
TMEM260-210ENST00000556422 CMKLR1Q99788 373 aa4.61□□□□□ -1.67
TMEM260-210ENST00000556422 TSSK6Q9BXA6 273 aa4.61□□□□□ -1.67
TMEM260-210ENST00000556422 SRRQ9GZT4 340 aa4.61□□□□□ -1.67
TMEM260-210ENST00000556422 MIXL1Q9H2W2 232 aa4.61□□□□□ -1.67
TMEM260-210ENST00000556422 SEMA6CQ9H3T2 930 aa4.61□□□□□ -1.67
TMEM260-210ENST00000556422 MTHFD2LQ9H903 347 aaPredicted RBP4.61□□□□□ -1.67
TMEM260-210ENST00000556422 PRDM6Q9NQX0 595 aa4.61□□□□□ -1.67
TMEM260-210ENST00000556422 PADI1Q9ULC6 663 aa4.61□□□□□ -1.67
TMEM260-210ENST00000556422 PI4KAP42356 2102 aa4.6□□□□□ -1.67
TMEM260-210ENST00000556422 PCNX3Q9H6A9 2034 aa4.6□□□□□ -1.67
TMEM260-210ENST00000556422 A0A1W2PR77 199 aa4.6□□□□□ -1.67
TMEM260-210ENST00000556422 HYKKA2RU49 373 aa4.6□□□□□ -1.67
TMEM260-210ENST00000556422 CDHR4A6H8M9 788 aa4.6□□□□□ -1.67
TMEM260-210ENST00000556422 FAM170BA6NMN3 283 aa4.6□□□□□ -1.67
TMEM260-210ENST00000556422 EIF1AYO14602 144 aaKnown RBP4.6□□□□□ -1.67
TMEM260-210ENST00000556422 ARPC3O15145 178 aa4.6□□□□□ -1.67
TMEM260-210ENST00000556422 FOXS1O43638 330 aa4.6□□□□□ -1.67
TMEM260-210ENST00000556422 SUSD5O60279 629 aa4.6□□□□□ -1.67
TMEM260-210ENST00000556422 RPLP0P05388 317 aaKnown RBP4.6□□□□□ -1.67
TMEM260-210ENST00000556422 SCG5P05408 212 aa4.6□□□□□ -1.67
TMEM260-210ENST00000556422 CRYBA1P05813 215 aa4.6□□□□□ -1.67
TMEM260-210ENST00000556422 TBXA2RP21731 343 aa4.6□□□□□ -1.67
TMEM260-210ENST00000556422 DNASE1P24855 282 aa4.6□□□□□ -1.67
TMEM260-210ENST00000556422 SDHAP31040 664 aa4.6□□□□□ -1.67
TMEM260-210ENST00000556422 GABRA4P48169 554 aa4.6□□□□□ -1.67
TMEM260-210ENST00000556422 MFAP4P55083 255 aa4.6□□□□□ -1.67
TMEM260-210ENST00000556422 PSG6Q00889 435 aa4.6□□□□□ -1.67
TMEM260-210ENST00000556422 ST3GAL3Q11203 375 aa4.6□□□□□ -1.67
TMEM260-210ENST00000556422 OR5I1Q13606 314 aa4.6□□□□□ -1.67
TMEM260-210ENST00000556422 BATFQ16520 125 aa4.6□□□□□ -1.67
TMEM260-210ENST00000556422 PRTGQ2VWP7 1150 aa4.6□□□□□ -1.67
TMEM260-210ENST00000556422 MRPL2Q5T653 305 aaKnown RBP4.6□□□□□ -1.67
TMEM260-210ENST00000556422 ATRAIDQ6UW56 229 aa4.6□□□□□ -1.67
TMEM260-210ENST00000556422 DPY19L2P2Q6ZN68 376 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms