RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 WDR38Q5JTN6 314 aa13.62□□□□□ -0.23
ARHGEF40-207ENST00000556399 C19orf48Q6RUI8 117 aa13.62□□□□□ -0.23
ARHGEF40-207ENST00000556399 H1FNTQ75WM6 255 aaPredicted RBP13.62□□□□□ -0.23
ARHGEF40-207ENST00000556399 WDSUB1Q8N9V3 476 aa13.62□□□□□ -0.23
ARHGEF40-207ENST00000556399 HSD17B11Q8NBQ5 300 aa13.62□□□□□ -0.23
ARHGEF40-207ENST00000556399 OR4C3Q8NH37 302 aa13.62□□□□□ -0.23
ARHGEF40-207ENST00000556399 EMC6Q9BV81 110 aa13.62□□□□□ -0.23
ARHGEF40-207ENST00000556399 B9D1Q9UPM9 204 aa13.62□□□□□ -0.23
ARHGEF40-207ENST00000556399 PIKFYVEQ9Y2I7 2098 aa13.62□□□□□ -0.23
ARHGEF40-207ENST00000556399 BRWD3Q6RI45 1802 aa13.62□□□□□ -0.23
ARHGEF40-207ENST00000556399 CCDC163A0A0D9SF12 145 aa13.62□□□□□ -0.23
ARHGEF40-207ENST00000556399 ICOSLGO75144 302 aa13.62□□□□□ -0.23
ARHGEF40-207ENST00000556399 ALDH3B1P43353 468 aa13.62□□□□□ -0.23
ARHGEF40-207ENST00000556399 PPICP45877 212 aa13.62□□□□□ -0.23
ARHGEF40-207ENST00000556399 CNN3Q15417 329 aaKnown RBP13.62□□□□□ -0.23
ARHGEF40-207ENST00000556399 PRICKLE4Q2TBC4 344 aa13.62□□□□□ -0.23
ARHGEF40-207ENST00000556399 KIAA0895LQ68EN5 471 aa13.62□□□□□ -0.23
ARHGEF40-207ENST00000556399 MISPQ8IVT2 679 aa13.62□□□□□ -0.23
ARHGEF40-207ENST00000556399 OR52N5Q8NH56 324 aa13.62□□□□□ -0.23
ARHGEF40-207ENST00000556399 OTOSQ8NHW6 89 aa13.62□□□□□ -0.23
ARHGEF40-207ENST00000556399 C3orf49Q96BT1 292 aa13.62□□□□□ -0.23
ARHGEF40-207ENST00000556399 S1PR5Q9H228 398 aa13.62□□□□□ -0.23
ARHGEF40-207ENST00000556399 C12orf10Q9HB07 376 aa13.62□□□□□ -0.23
ARHGEF40-207ENST00000556399 ALKBH4Q9NXW9 302 aa13.62□□□□□ -0.23
ARHGEF40-207ENST00000556399 R4GMQ9 66 aa13.62□□□□□ -0.23
ARHGEF40-207ENST00000556399 RALGAPA2Q2PPJ7 1873 aa13.62□□□□□ -0.23
ARHGEF40-207ENST00000556399 F5P12259 2224 aa13.62□□□□□ -0.23
ARHGEF40-207ENST00000556399 PLXNA1Q9UIW2 1896 aa13.62□□□□□ -0.23
ARHGEF40-207ENST00000556399 H3BUI4 141 aa13.61□□□□□ -0.23
ARHGEF40-207ENST00000556399 GABRA1P14867 456 aa13.61□□□□□ -0.23
ARHGEF40-207ENST00000556399 CDKN2AP42771 156 aaKnown RBP13.61□□□□□ -0.23
ARHGEF40-207ENST00000556399 MTCP1P56278 107 aa13.61□□□□□ -0.23
ARHGEF40-207ENST00000556399 MRPS21P82921 87 aaKnown RBP13.61□□□□□ -0.23
ARHGEF40-207ENST00000556399 RPL19P84098 196 aaKnown RBP13.61□□□□□ -0.23
ARHGEF40-207ENST00000556399 C17orf67Q0P5P2 114 aa13.61□□□□□ -0.23
ARHGEF40-207ENST00000556399 HSD17B13Q7Z5P4 300 aaPredicted RBP13.61□□□□□ -0.23
ARHGEF40-207ENST00000556399 CMTM1Q8IZ96 169 aa13.61□□□□□ -0.23
ARHGEF40-207ENST00000556399 FBXW5Q969U6 566 aa13.61□□□□□ -0.23
ARHGEF40-207ENST00000556399 OR8B4Q96RC9 309 aa13.61□□□□□ -0.23
ARHGEF40-207ENST00000556399 C20orf24Q9BUV8 137 aa13.61□□□□□ -0.23
ARHGEF40-207ENST00000556399 METTL9Q9H1A3 318 aa13.61□□□□□ -0.23
ARHGEF40-207ENST00000556399 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.61□□□□□ -0.23
ARHGEF40-207ENST00000556399 TNFSF12O43508 249 aa13.61□□□□□ -0.23
ARHGEF40-207ENST00000556399 ZNF217O75362 1048 aa13.61□□□□□ -0.23
ARHGEF40-207ENST00000556399 THBS2P35442 1172 aa13.61□□□□□ -0.23
ARHGEF40-207ENST00000556399 OR2W3Q7Z3T1 314 aa13.61□□□□□ -0.23
ARHGEF40-207ENST00000556399 LRRC18Q8N456 261 aa13.61□□□□□ -0.23
ARHGEF40-207ENST00000556399 OR51E1Q8TCB6 317 aa13.61□□□□□ -0.23
ARHGEF40-207ENST00000556399 HSD17B8Q92506 261 aa13.61□□□□□ -0.23
ARHGEF40-207ENST00000556399 RSPRY1Q96DX4 576 aa13.61□□□□□ -0.23
ARHGEF40-207ENST00000556399 KTI12Q96EK9 354 aaPredicted RBP13.61□□□□□ -0.23
ARHGEF40-207ENST00000556399 OR2A5Q96R48 311 aa13.61□□□□□ -0.23
ARHGEF40-207ENST00000556399 NKX2-4Q9H2Z4 354 aa13.61□□□□□ -0.23
ARHGEF40-207ENST00000556399 ZNF749O43361 778 aa13.61□□□□□ -0.23
ARHGEF40-207ENST00000556399 GREM1O60565 184 aa13.61□□□□□ -0.23
ARHGEF40-207ENST00000556399 MPPED2Q15777 294 aa13.61□□□□□ -0.23
ARHGEF40-207ENST00000556399 OR1S1Q8NH92 325 aa13.61□□□□□ -0.23
ARHGEF40-207ENST00000556399 RRNAD1Q96FB5 475 aaKnown RBP13.61□□□□□ -0.23
ARHGEF40-207ENST00000556399 UQCC2Q9BRT2 126 aa13.61□□□□□ -0.23
ARHGEF40-207ENST00000556399 ABHD6Q9BV23 337 aa13.61□□□□□ -0.23
ARHGEF40-207ENST00000556399 TCEAL2Q9H3H9 227 aaPredicted RBP13.61□□□□□ -0.23
ARHGEF40-207ENST00000556399 MMP25Q9NPA2 562 aa13.61□□□□□ -0.23
ARHGEF40-207ENST00000556399 NIT2Q9NQR4 276 aa13.61□□□□□ -0.23
ARHGEF40-207ENST00000556399 B3GALT5Q9Y2C3 310 aa13.61□□□□□ -0.23
ARHGEF40-207ENST00000556399 KPTNQ9Y664 436 aa13.61□□□□□ -0.23
ARHGEF40-207ENST00000556399 OMGP23515 440 aa13.61□□□□□ -0.23
ARHGEF40-207ENST00000556399 PLP2Q04941 152 aa13.61□□□□□ -0.23
ARHGEF40-207ENST00000556399 MALLQ13021 153 aa13.61□□□□□ -0.23
ARHGEF40-207ENST00000556399 DHRS2Q13268 280 aa13.61□□□□□ -0.23
ARHGEF40-207ENST00000556399 TMEM176BQ3YBM2 270 aaPredicted RBP13.61□□□□□ -0.23
ARHGEF40-207ENST00000556399 SOHLH1Q5JUK2 328 aa13.61□□□□□ -0.23
ARHGEF40-207ENST00000556399 TRILQ7L0X0 811 aa13.61□□□□□ -0.23
ARHGEF40-207ENST00000556399 PRSS35Q8N3Z0 413 aa13.61□□□□□ -0.23
ARHGEF40-207ENST00000556399 LILRB2Q8N423 598 aa13.61□□□□□ -0.23
ARHGEF40-207ENST00000556399 BVESQ8NE79 360 aa13.61□□□□□ -0.23
ARHGEF40-207ENST00000556399 SLAMF6Q96DU3 332 aa13.61□□□□□ -0.23
ARHGEF40-207ENST00000556399 PCDHB10Q9UN67 800 aa13.61□□□□□ -0.23
ARHGEF40-207ENST00000556399 MRPS2Q9Y399 296 aaKnown RBP13.61□□□□□ -0.23
ARHGEF40-207ENST00000556399 CNOT4O95628 575 aaKnown RBP13.6□□□□□ -0.23
ARHGEF40-207ENST00000556399 UBE2KP61086 200 aa13.6□□□□□ -0.23
ARHGEF40-207ENST00000556399 HGDQ93099 445 aa13.6□□□□□ -0.23
ARHGEF40-207ENST00000556399 C4orf45Q96LM5 186 aa13.6□□□□□ -0.23
ARHGEF40-207ENST00000556399 SLC25A31Q9H0C2 315 aa13.6□□□□□ -0.23
ARHGEF40-207ENST00000556399 TXNIPQ9H3M7 391 aa13.6□□□□□ -0.23
ARHGEF40-207ENST00000556399 FLRT3Q9NZU0 649 aa13.6□□□□□ -0.23
ARHGEF40-207ENST00000556399 AKR7A3O95154 331 aa13.6□□□□□ -0.23
ARHGEF40-207ENST00000556399 IL33O95760 270 aa13.6□□□□□ -0.23
ARHGEF40-207ENST00000556399 GPANK1O95872 356 aa13.6□□□□□ -0.23
ARHGEF40-207ENST00000556399 MYOGP15173 224 aa13.6□□□□□ -0.23
ARHGEF40-207ENST00000556399 PRTGQ2VWP7 1150 aa13.6□□□□□ -0.23
ARHGEF40-207ENST00000556399 Q5BKY6 102 aa13.6□□□□□ -0.23
ARHGEF40-207ENST00000556399 ADAM5Q6NVV9 412 aa13.6□□□□□ -0.23
ARHGEF40-207ENST00000556399 PARM1Q6UWI2 310 aa13.6□□□□□ -0.23
ARHGEF40-207ENST00000556399 EXD3Q8N9H8 876 aa13.6□□□□□ -0.23
ARHGEF40-207ENST00000556399 MS4A7Q9GZW8 240 aaPredicted RBP13.6□□□□□ -0.23
ARHGEF40-207ENST00000556399 OPN4Q9UHM6 478 aa13.6□□□□□ -0.23
ARHGEF40-207ENST00000556399 TMEM272A0A1B0GTI8 110 aa13.6□□□□□ -0.23
ARHGEF40-207ENST00000556399 LILRB5O75023 590 aa13.6□□□□□ -0.23
ARHGEF40-207ENST00000556399 CT62P0C5K7 136 aa13.6□□□□□ -0.23
ARHGEF40-207ENST00000556399 ANKRD34CP0C6C1 535 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms