RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 KLHL21Q9UJP4 597 aa8.31□□□□□ -1.08
SRP54-210ENST00000556380 LHFPL6Q9Y693 200 aa8.31□□□□□ -1.08
SRP54-210ENST00000556380 IQCMA0A1B0GVH7 501 aa8.3□□□□□ -1.08
SRP54-210ENST00000556380 B9A039 149 aa8.3□□□□□ -1.08
SRP54-210ENST00000556380 RER1O15258 196 aa8.3□□□□□ -1.08
SRP54-210ENST00000556380 SURF4O15260 269 aa8.3□□□□□ -1.08
SRP54-210ENST00000556380 SYNGR3O43761 229 aa8.3□□□□□ -1.08
SRP54-210ENST00000556380 IFNGP01579 166 aa8.3□□□□□ -1.08
SRP54-210ENST00000556380 IGHV4-39P01824 125 aa8.3□□□□□ -1.08
SRP54-210ENST00000556380 HMGN1P05114 100 aa8.3□□□□□ -1.08
SRP54-210ENST00000556380 CLUP10909 449 aa8.3□□□□□ -1.08
SRP54-210ENST00000556380 SPI1P17947 270 aa8.3□□□□□ -1.08
SRP54-210ENST00000556380 POU1F1P28069 291 aa8.3□□□□□ -1.08
SRP54-210ENST00000556380 CDKN1AP38936 164 aa8.3□□□□□ -1.08
SRP54-210ENST00000556380 WNT5AP41221 380 aa8.3□□□□□ -1.08
SRP54-210ENST00000556380 UCP2P55851 309 aa8.3□□□□□ -1.08
SRP54-210ENST00000556380 ESRRGP62508 458 aa8.3□□□□□ -1.08
SRP54-210ENST00000556380 EFNB1P98172 346 aa8.3□□□□□ -1.08
SRP54-210ENST00000556380 PPP2R2BQ00005 443 aa8.3□□□□□ -1.08
SRP54-210ENST00000556380 GABPB1Q06547 395 aaPredicted RBP8.3□□□□□ -1.08
SRP54-210ENST00000556380 SCRN3Q0VDG4 424 aa8.3□□□□□ -1.08
SRP54-210ENST00000556380 AQP6Q13520 282 aa8.3□□□□□ -1.08
SRP54-210ENST00000556380 PCK2Q16822 640 aa8.3□□□□□ -1.08
SRP54-210ENST00000556380 KRTAP27-1Q3LI81 207 aa8.3□□□□□ -1.08
SRP54-210ENST00000556380 TMEM236Q5W0B7 351 aa8.3□□□□□ -1.08
SRP54-210ENST00000556380 SLC18B1Q6NT16 456 aa8.3□□□□□ -1.08
SRP54-210ENST00000556380 OR51L1Q8NGJ5 315 aa8.3□□□□□ -1.08
SRP54-210ENST00000556380 OR9Q1Q8NGQ5 310 aa8.3□□□□□ -1.08
SRP54-210ENST00000556380 MRPL24Q96A35 216 aaKnown RBP8.3□□□□□ -1.08
SRP54-210ENST00000556380 RAB3IPQ96QF0 476 aaPredicted RBP8.3□□□□□ -1.08
SRP54-210ENST00000556380 SEMA6AQ9H2E6 1030 aa8.3□□□□□ -1.08
SRP54-210ENST00000556380 S100A14Q9HCY8 104 aa8.3□□□□□ -1.08
SRP54-210ENST00000556380 ASH2LQ9UBL3 628 aa8.3□□□□□ -1.08
SRP54-210ENST00000556380 OAZ3Q9UMX2 235 aa8.3□□□□□ -1.08
SRP54-210ENST00000556380 CMAHPQ9Y471 501 aa8.3□□□□□ -1.08
SRP54-210ENST00000556380 SPEF1Q9Y4P9 236 aa8.3□□□□□ -1.08
SRP54-210ENST00000556380 NIPBLQ6KC79 2804 aaeCLIP8.3□□□□□ -1.08
SRP54-210ENST00000556380 C5orf49A4QMS7 147 aa8.29□□□□□ -1.08
SRP54-210ENST00000556380 FAM183AA6NL82 134 aa8.29□□□□□ -1.08
SRP54-210ENST00000556380 RIIAD1A6NNX1 92 aa8.29□□□□□ -1.08
SRP54-210ENST00000556380 E9PQ18 207 aa8.29□□□□□ -1.08
SRP54-210ENST00000556380 H7C417 338 aa8.29□□□□□ -1.08
SRP54-210ENST00000556380 SGCEO43556 437 aa8.29□□□□□ -1.08
SRP54-210ENST00000556380 NDUFS7O75251 213 aa8.29□□□□□ -1.08
SRP54-210ENST00000556380 GYPBP06028 91 aa8.29□□□□□ -1.08
SRP54-210ENST00000556380 PSKH1P11801 424 aa8.29□□□□□ -1.08
SRP54-210ENST00000556380 ZNF250P15622 560 aa8.29□□□□□ -1.08
SRP54-210ENST00000556380 ZNF23P17027 643 aa8.29□□□□□ -1.08
SRP54-210ENST00000556380 ZNF3P17036 446 aa8.29□□□□□ -1.08
SRP54-210ENST00000556380 APLNRP35414 380 aa8.29□□□□□ -1.08
SRP54-210ENST00000556380 POLR2IP36954 125 aaKnown RBP8.29□□□□□ -1.08
SRP54-210ENST00000556380 CENPAP49450 140 aa8.29□□□□□ -1.08
SRP54-210ENST00000556380 EVX1P49640 407 aa8.29□□□□□ -1.08
SRP54-210ENST00000556380 GDI2P50395 445 aaKnown RBP8.29□□□□□ -1.08
SRP54-210ENST00000556380 ATP5J2P56134 94 aa8.29□□□□□ -1.08
SRP54-210ENST00000556380 PTGES3Q15185 160 aaKnown RBP8.29□□□□□ -1.08
SRP54-210ENST00000556380 TBC1D28Q2M2D7 210 aa8.29□□□□□ -1.08
SRP54-210ENST00000556380 TEX30Q5JUR7 227 aa8.29□□□□□ -1.08
SRP54-210ENST00000556380 SHEQ5VZ18 495 aa8.29□□□□□ -1.08
SRP54-210ENST00000556380 CORO6Q6QEF8 472 aa8.29□□□□□ -1.08
SRP54-210ENST00000556380 VHLLQ6RSH7 139 aa8.29□□□□□ -1.08
SRP54-210ENST00000556380 DNM1P46Q6ZS02 220 aa8.29□□□□□ -1.08
SRP54-210ENST00000556380 LRP11Q86VZ4 500 aa8.29□□□□□ -1.08
SRP54-210ENST00000556380 TGIF2LYQ8IUE0 185 aa8.29□□□□□ -1.08
SRP54-210ENST00000556380 ZNF101Q8IZC7 436 aa8.29□□□□□ -1.08
SRP54-210ENST00000556380 Q8N3U1 123 aa8.29□□□□□ -1.08
SRP54-210ENST00000556380 WFDC11Q8NEX6 87 aa8.29□□□□□ -1.08
SRP54-210ENST00000556380 PROKR2Q8NFJ6 384 aa8.29□□□□□ -1.08
SRP54-210ENST00000556380 GJC3Q8NFK1 279 aa8.29□□□□□ -1.08
SRP54-210ENST00000556380 OR1F12Q8NHA8 337 aa8.29□□□□□ -1.08
SRP54-210ENST00000556380 PERPQ96FX8 193 aa8.29□□□□□ -1.08
SRP54-210ENST00000556380 CIB1Q99828 191 aa8.29□□□□□ -1.08
SRP54-210ENST00000556380 OSBPL10Q9BXB5 764 aa8.29□□□□□ -1.08
SRP54-210ENST00000556380 CACNG6Q9BXT2 260 aa8.29□□□□□ -1.08
SRP54-210ENST00000556380 MRPL37Q9BZE1 423 aaKnown RBP8.29□□□□□ -1.08
SRP54-210ENST00000556380 MED20Q9H944 212 aa8.29□□□□□ -1.08
SRP54-210ENST00000556380 MARCH7Q9H992 704 aa8.29□□□□□ -1.08
SRP54-210ENST00000556380 CDH20Q9HBT6 801 aa8.29□□□□□ -1.08
SRP54-210ENST00000556380 PNRC2Q9NPJ4 139 aaKnown RBP8.29□□□□□ -1.08
SRP54-210ENST00000556380 KCNG2Q9UJ96 466 aa8.29□□□□□ -1.08
SRP54-210ENST00000556380 NF1P21359 2839 aa8.28□□□□□ -1.08
SRP54-210ENST00000556380 IGLV3-9A0A075B6K5 115 aa8.28□□□□□ -1.08
SRP54-210ENST00000556380 TVP23AA6NH52 213 aa8.28□□□□□ -1.08
SRP54-210ENST00000556380 SAC3D1A6NKF1 404 aa8.28□□□□□ -1.08
SRP54-210ENST00000556380 ZAR1LA6NP61 321 aa8.28□□□□□ -1.08
SRP54-210ENST00000556380 VSTM5A8MXK1 200 aa8.28□□□□□ -1.08
SRP54-210ENST00000556380 NGFP01138 241 aa8.28□□□□□ -1.08
SRP54-210ENST00000556380 SLC2A5P22732 501 aa8.28□□□□□ -1.08
SRP54-210ENST00000556380 FMO3P31513 532 aa8.28□□□□□ -1.08
SRP54-210ENST00000556380 RAD52P43351 418 aa8.28□□□□□ -1.08
SRP54-210ENST00000556380 ERVS71-1P61550 626 aa8.28□□□□□ -1.08
SRP54-210ENST00000556380 RPS23P62266 143 aaKnown RBP8.28□□□□□ -1.08
SRP54-210ENST00000556380 GALK2Q01415 458 aa8.28□□□□□ -1.08
SRP54-210ENST00000556380 RAB35Q15286 201 aa8.28□□□□□ -1.08
SRP54-210ENST00000556380 ZSCAN26Q16670 478 aa8.28□□□□□ -1.08
SRP54-210ENST00000556380 TMEM255AQ5JRV8 349 aa8.28□□□□□ -1.08
SRP54-210ENST00000556380 Q5PR19 223 aa8.28□□□□□ -1.08
SRP54-210ENST00000556380 ELFN2Q5R3F8 820 aa8.28□□□□□ -1.08
SRP54-210ENST00000556380 SLX4IPQ5VYV7 408 aa8.28□□□□□ -1.08
SRP54-210ENST00000556380 CFAP77Q6ZQR2 320 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms