RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 CCT8L1PA6NM43 557 aa3.39□□□□□ -1.87
PRPF39-209ENST00000556353 OR52A4PA6NMU1 304 aa3.39□□□□□ -1.87
PRPF39-209ENST00000556353 C12orf71A8MTZ7 269 aa3.39□□□□□ -1.87
PRPF39-209ENST00000556353 E5RI56 91 aa3.39□□□□□ -1.87
PRPF39-209ENST00000556353 NPIPA2E9PIF3 369 aa3.39□□□□□ -1.87
PRPF39-209ENST00000556353 K7ENP7 123 aa3.39□□□□□ -1.87
PRPF39-209ENST00000556353 ITGB1BP1O14713 200 aa3.39□□□□□ -1.87
PRPF39-209ENST00000556353 SCGB2A1O75556 95 aa3.39□□□□□ -1.87
PRPF39-209ENST00000556353 GPX5O75715 221 aa3.39□□□□□ -1.87
PRPF39-209ENST00000556353 DHFRP00374 187 aa3.39□□□□□ -1.87
PRPF39-209ENST00000556353 SERPINA3P01011 423 aa3.39□□□□□ -1.87
PRPF39-209ENST00000556353 SERPINA5P05154 406 aa3.39□□□□□ -1.87
PRPF39-209ENST00000556353 STAG3L2P0CL84 134 aa3.39□□□□□ -1.87
PRPF39-209ENST00000556353 AREGP15514 252 aa3.39□□□□□ -1.87
PRPF39-209ENST00000556353 SRMP19623 302 aa3.39□□□□□ -1.87
PRPF39-209ENST00000556353 NCF2P19878 526 aaPredicted RBP3.39□□□□□ -1.87
PRPF39-209ENST00000556353 SDC4P31431 198 aa3.39□□□□□ -1.87
PRPF39-209ENST00000556353 PRKCIP41743 596 aa3.39□□□□□ -1.87
PRPF39-209ENST00000556353 CSNK1DP48730 415 aa3.39□□□□□ -1.87
PRPF39-209ENST00000556353 AP1S2P56377 157 aa3.39□□□□□ -1.87
PRPF39-209ENST00000556353 NME5P56597 212 aa3.39□□□□□ -1.87
PRPF39-209ENST00000556353 RHOAP61586 193 aa3.39□□□□□ -1.87
PRPF39-209ENST00000556353 CCL7P80098 99 aa3.39□□□□□ -1.87
PRPF39-209ENST00000556353 CXCL6P80162 114 aa3.39□□□□□ -1.87
PRPF39-209ENST00000556353 PAX2Q02962 417 aa3.39□□□□□ -1.87
PRPF39-209ENST00000556353 SLAQ13239 276 aa3.39□□□□□ -1.87
PRPF39-209ENST00000556353 C16orf72Q14CZ0 275 aa3.39□□□□□ -1.87
PRPF39-209ENST00000556353 CEBPEQ15744 281 aa3.39□□□□□ -1.87
PRPF39-209ENST00000556353 SLC36A3Q495N2 470 aa3.39□□□□□ -1.87
PRPF39-209ENST00000556353 ZNF789Q5FWF6 425 aa3.39□□□□□ -1.87
PRPF39-209ENST00000556353 TCHHL1Q5QJ38 904 aaPredicted RBP3.39□□□□□ -1.87
PRPF39-209ENST00000556353 HES5Q5TA89 166 aa3.39□□□□□ -1.87
PRPF39-209ENST00000556353 MLIPQ5VWP3 458 aa3.39□□□□□ -1.87
PRPF39-209ENST00000556353 RAET1GQ6H3X3 334 aa3.39□□□□□ -1.87
PRPF39-209ENST00000556353 C1orf94Q6P1W5 598 aa3.39□□□□□ -1.87
PRPF39-209ENST00000556353 RFLNAQ6ZTI6 216 aa3.39□□□□□ -1.87
PRPF39-209ENST00000556353 STRADAQ7RTN6 431 aa3.39□□□□□ -1.87
PRPF39-209ENST00000556353 SPATA19Q7Z5L4 167 aa3.39□□□□□ -1.87
PRPF39-209ENST00000556353 LHFPL3Q86UP9 236 aa3.39□□□□□ -1.87
PRPF39-209ENST00000556353 SLC13A5Q86YT5 568 aaPredicted RBP3.39□□□□□ -1.87
PRPF39-209ENST00000556353 PLCZ1Q86YW0 608 aa3.39□□□□□ -1.87
PRPF39-209ENST00000556353 GID4Q8IVV7 300 aa3.39□□□□□ -1.87
PRPF39-209ENST00000556353 KATNAL2Q8IYT4 538 aa3.39□□□□□ -1.87
PRPF39-209ENST00000556353 OFCC1Q8IZS5 231 aa3.39□□□□□ -1.87
PRPF39-209ENST00000556353 BATF2Q8N1L9 274 aa3.39□□□□□ -1.87
PRPF39-209ENST00000556353 UMODL1-AS1Q8N2C9 162 aa3.39□□□□□ -1.87
PRPF39-209ENST00000556353 OR7G3Q8NG95 312 aa3.39□□□□□ -1.87
PRPF39-209ENST00000556353 OR52E1Q8NGJ3 308 aa3.39□□□□□ -1.87
PRPF39-209ENST00000556353 OR1K1Q8NGR3 316 aa3.39□□□□□ -1.87
PRPF39-209ENST00000556353 LINC01006Q8NI28 216 aa3.39□□□□□ -1.87
PRPF39-209ENST00000556353 MCOLN3Q8TDD5 553 aa3.39□□□□□ -1.87
PRPF39-209ENST00000556353 VN1R17PQ8TDU5 208 aa3.39□□□□□ -1.87
PRPF39-209ENST00000556353 ST7LQ8TDW4 575 aa3.39□□□□□ -1.87
PRPF39-209ENST00000556353 CKAP2Q8WWK9 683 aa3.39□□□□□ -1.87
PRPF39-209ENST00000556353 HTR3CQ8WXA8 447 aa3.39□□□□□ -1.87
PRPF39-209ENST00000556353 MYDGFQ969H8 173 aa3.39□□□□□ -1.87
PRPF39-209ENST00000556353 C5orf30Q96GV9 206 aa3.39□□□□□ -1.87
PRPF39-209ENST00000556353 MAGEB18Q96M61 343 aa3.39□□□□□ -1.87
PRPF39-209ENST00000556353 ZNF285Q96NJ3 590 aa3.39□□□□□ -1.87
PRPF39-209ENST00000556353 OLFM3Q96PB7 478 aa3.39□□□□□ -1.87
PRPF39-209ENST00000556353 CCT8L2Q96SF2 557 aa3.39□□□□□ -1.87
PRPF39-209ENST00000556353 C17orf62Q9BQA9 187 aa3.39□□□□□ -1.87
PRPF39-209ENST00000556353 ZNF350Q9GZX5 532 aa3.39□□□□□ -1.87
PRPF39-209ENST00000556353 SAV1Q9H4B6 383 aaPredicted RBP3.39□□□□□ -1.87
PRPF39-209ENST00000556353 ADAP2Q9NPF8 381 aa3.39□□□□□ -1.87
PRPF39-209ENST00000556353 DYRK4Q9NR20 520 aa3.39□□□□□ -1.87
PRPF39-209ENST00000556353 DIABLOQ9NR28 239 aa3.39□□□□□ -1.87
PRPF39-209ENST00000556353 TMEM9Q9P0T7 183 aa3.39□□□□□ -1.87
PRPF39-209ENST00000556353 CYB5R1Q9UHQ9 305 aa3.39□□□□□ -1.87
PRPF39-209ENST00000556353 ENOPH1Q9UHY7 261 aa3.39□□□□□ -1.87
PRPF39-209ENST00000556353 ZNF229Q9UJW7 825 aa3.39□□□□□ -1.87
PRPF39-209ENST00000556353 FBXW2Q9UKT8 454 aa3.39□□□□□ -1.87
PRPF39-209ENST00000556353 V9GYQ6 96 aa3.39□□□□□ -1.87
PRPF39-209ENST00000556353 CPAMD8Q8IZJ3 1885 aa3.39□□□□□ -1.87
PRPF39-209ENST00000556353 TLN2Q9Y4G6 2542 aa3.38□□□□□ -1.87
PRPF39-209ENST00000556353 NAV3Q8IVL0 2385 aa3.38□□□□□ -1.87
PRPF39-209ENST00000556353 FAM240BA0A1B0GVZ2 78 aa3.38□□□□□ -1.87
PRPF39-209ENST00000556353 SMIM30A4D0T7 59 aa3.38□□□□□ -1.87
PRPF39-209ENST00000556353 BTBD17A6NE02 478 aa3.38□□□□□ -1.87
PRPF39-209ENST00000556353 CFAP73A6NFT4 308 aa3.38□□□□□ -1.87
PRPF39-209ENST00000556353 SIGLEC16A6NMB1 481 aa3.38□□□□□ -1.87
PRPF39-209ENST00000556353 A8MX80 341 aa3.38□□□□□ -1.87
PRPF39-209ENST00000556353 C2orf74A8MZ97 194 aa3.38□□□□□ -1.87
PRPF39-209ENST00000556353 TMEM114B3SHH9 223 aa3.38□□□□□ -1.87
PRPF39-209ENST00000556353 TCP11X1B4DZS4 312 aa3.38□□□□□ -1.87
PRPF39-209ENST00000556353 SUPT3HB4E1H0 165 aa3.38□□□□□ -1.87
PRPF39-209ENST00000556353 E7ESA3 106 aa3.38□□□□□ -1.87
PRPF39-209ENST00000556353 MGRN1O60291 552 aa3.38□□□□□ -1.87
PRPF39-209ENST00000556353 SUPT3HO75486 399 aa3.38□□□□□ -1.87
PRPF39-209ENST00000556353 GMNNO75496 209 aa3.38□□□□□ -1.87
PRPF39-209ENST00000556353 TM7SF2O76062 418 aa3.38□□□□□ -1.87
PRPF39-209ENST00000556353 TNFSF15O95150 251 aa3.38□□□□□ -1.87
PRPF39-209ENST00000556353 OXSR1O95747 527 aaPredicted RBP3.38□□□□□ -1.87
PRPF39-209ENST00000556353 IGSF6O95976 241 aa3.38□□□□□ -1.87
PRPF39-209ENST00000556353 FABP1P07148 127 aa3.38□□□□□ -1.87
PRPF39-209ENST00000556353 STSP08842 583 aa3.38□□□□□ -1.87
PRPF39-209ENST00000556353 P0C879 139 aa3.38□□□□□ -1.87
PRPF39-209ENST00000556353 PRPS1L1P21108 318 aa3.38□□□□□ -1.87
PRPF39-209ENST00000556353 DRD5P21918 477 aa3.38□□□□□ -1.87
PRPF39-209ENST00000556353 AK4P27144 223 aaPredicted RBP3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms