RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 SLIT3O75094 1523 aa1.64□□□□□ -2.15
SCFD1-218ENST00000556256 COL1A2P08123 1366 aa1.63□□□□□ -2.15
SCFD1-218ENST00000556256 GPATCH8Q9UKJ3 1502 aaKnown RBP1.63□□□□□ -2.15
SCFD1-218ENST00000556256 SMCO2A6NFE2 343 aa1.63□□□□□ -2.15
SCFD1-218ENST00000556256 NCBP2LA6PVI3 153 aaKnown RBP1.63□□□□□ -2.15
SCFD1-218ENST00000556256 SGK1O00141 431 aa1.63□□□□□ -2.15
SCFD1-218ENST00000556256 CACNG3O60359 315 aa1.63□□□□□ -2.15
SCFD1-218ENST00000556256 HUS1O60921 280 aa1.63□□□□□ -2.15
SCFD1-218ENST00000556256 SLC25A14O95258 325 aaPredicted RBP1.63□□□□□ -2.15
SCFD1-218ENST00000556256 MRPL3P09001 348 aaKnown RBP1.63□□□□□ -2.15
SCFD1-218ENST00000556256 UBTFL6P0CB48 400 aaPredicted RBP1.63□□□□□ -2.15
SCFD1-218ENST00000556256 MYL2P10916 166 aa1.63□□□□□ -2.15
SCFD1-218ENST00000556256 TCN2P20062 427 aa1.63□□□□□ -2.15
SCFD1-218ENST00000556256 BCKDHBP21953 392 aa1.63□□□□□ -2.15
SCFD1-218ENST00000556256 CEACAM3P40198 252 aa1.63□□□□□ -2.15
SCFD1-218ENST00000556256 SYKP43405 635 aa1.63□□□□□ -2.15
SCFD1-218ENST00000556256 RGS8P57771 180 aaPredicted RBP1.63□□□□□ -2.15
SCFD1-218ENST00000556256 STXBP1P61764 594 aaKnown RBP1.63□□□□□ -2.15
SCFD1-218ENST00000556256 TRAM2Q15035 370 aa1.63□□□□□ -2.15
SCFD1-218ENST00000556256 QPRTQ15274 297 aa1.63□□□□□ -2.15
SCFD1-218ENST00000556256 RCN1Q15293 331 aa1.63□□□□□ -2.15
SCFD1-218ENST00000556256 IRF4Q15306 451 aa1.63□□□□□ -2.15
SCFD1-218ENST00000556256 STK11Q15831 433 aa1.63□□□□□ -2.15
SCFD1-218ENST00000556256 BZW1Q7L1Q6 419 aaKnown RBP1.63□□□□□ -2.15
SCFD1-218ENST00000556256 CMC1Q7Z7K0 106 aa1.63□□□□□ -2.15
SCFD1-218ENST00000556256 CBLN2Q8IUK8 224 aa1.63□□□□□ -2.15
SCFD1-218ENST00000556256 RIMKLAQ8IXN7 391 aa1.63□□□□□ -2.15
SCFD1-218ENST00000556256 OR5K2Q8NHB8 316 aa1.63□□□□□ -2.15
SCFD1-218ENST00000556256 LYPD6BQ8NI32 183 aa1.63□□□□□ -2.15
SCFD1-218ENST00000556256 FRZBQ92765 325 aa1.63□□□□□ -2.15
SCFD1-218ENST00000556256 NTAN1Q96AB6 310 aa1.63□□□□□ -2.15
SCFD1-218ENST00000556256 TM4SF18Q96CE8 201 aa1.63□□□□□ -2.15
SCFD1-218ENST00000556256 DNAJC1Q96KC8 554 aaKnown RBP1.63□□□□□ -2.15
SCFD1-218ENST00000556256 XPO6Q96QU8 1125 aaKnown RBP1.63□□□□□ -2.15
SCFD1-218ENST00000556256 EXO5Q9H790 373 aa1.63□□□□□ -2.15
SCFD1-218ENST00000556256 TMEM9BQ9NQ34 198 aa1.63□□□□□ -2.15
SCFD1-218ENST00000556256 LYARQ9NX58 379 aaKnown RBP1.63□□□□□ -2.15
SCFD1-218ENST00000556256 ZNRD1Q9P1U0 126 aa1.63□□□□□ -2.15
SCFD1-218ENST00000556256 TET2Q6N021 2002 aaPredicted RBP1.62□□□□□ -2.15
SCFD1-218ENST00000556256 KBTBD11-OT1A0A1B0GTJ5 212 aa1.62□□□□□ -2.15
SCFD1-218ENST00000556256 A0A1W2PP18 115 aa1.62□□□□□ -2.15
SCFD1-218ENST00000556256 TMEM223A0PJW6 202 aa1.62□□□□□ -2.15
SCFD1-218ENST00000556256 A6NDN8 102 aa1.62□□□□□ -2.15
SCFD1-218ENST00000556256 BET1O15155 118 aa1.62□□□□□ -2.15
SCFD1-218ENST00000556256 SOCS1O15524 211 aa1.62□□□□□ -2.15
SCFD1-218ENST00000556256 RAD51CO43502 376 aa1.62□□□□□ -2.15
SCFD1-218ENST00000556256 HMMRO75330 724 aa1.62□□□□□ -2.15
SCFD1-218ENST00000556256 FLOT1O75955 427 aa1.62□□□□□ -2.15
SCFD1-218ENST00000556256 YIF1AO95070 293 aa1.62□□□□□ -2.15
SCFD1-218ENST00000556256 CD160O95971 181 aa1.62□□□□□ -2.15
SCFD1-218ENST00000556256 ARG1P05089 322 aa1.62□□□□□ -2.15
SCFD1-218ENST00000556256 CTSLP07711 333 aa1.62□□□□□ -2.15
SCFD1-218ENST00000556256 CD3GP09693 182 aa1.62□□□□□ -2.15
SCFD1-218ENST00000556256 RHOXF2BP0C7M4 288 aa1.62□□□□□ -2.15
SCFD1-218ENST00000556256 CTRB1P17538 263 aa1.62□□□□□ -2.15
SCFD1-218ENST00000556256 GALP22466 123 aa1.62□□□□□ -2.15
SCFD1-218ENST00000556256 WARSP23381 471 aaKnown RBP1.62□□□□□ -2.15
SCFD1-218ENST00000556256 OR1E1P30953 314 aa1.62□□□□□ -2.15
SCFD1-218ENST00000556256 SEMG2Q02383 582 aa1.62□□□□□ -2.15
SCFD1-218ENST00000556256 GBE1Q04446 702 aa1.62□□□□□ -2.15
SCFD1-218ENST00000556256 CDH17Q12864 832 aa1.62□□□□□ -2.15
SCFD1-218ENST00000556256 MERTKQ12866 999 aa1.62□□□□□ -2.15
SCFD1-218ENST00000556256 RCAN2Q14206 197 aa1.62□□□□□ -2.15
SCFD1-218ENST00000556256 CHRFAM7AQ494W8 412 aa1.62□□□□□ -2.15
SCFD1-218ENST00000556256 ABCA11PQ4W5N1 156 aa1.62□□□□□ -2.15
SCFD1-218ENST00000556256 AVPI1Q5T686 147 aa1.62□□□□□ -2.15
SCFD1-218ENST00000556256 GPR107Q5VW38 600 aa1.62□□□□□ -2.15
SCFD1-218ENST00000556256 METTL21CQ5VZV1 264 aa1.62□□□□□ -2.15
SCFD1-218ENST00000556256 MBOAT1Q6ZNC8 495 aa1.62□□□□□ -2.15
SCFD1-218ENST00000556256 CENPQQ7L2Z9 268 aaPredicted RBP1.62□□□□□ -2.15
SCFD1-218ENST00000556256 ABHD12BQ7Z5M8 362 aaPredicted RBP1.62□□□□□ -2.15
SCFD1-218ENST00000556256 LUZP2Q86TE4 346 aa1.62□□□□□ -2.15
SCFD1-218ENST00000556256 UBALD2Q8IYN6 164 aa1.62□□□□□ -2.15
SCFD1-218ENST00000556256 GABRG1Q8N1C3 465 aa1.62□□□□□ -2.15
SCFD1-218ENST00000556256 OR9G4Q8NGQ1 327 aa1.62□□□□□ -2.15
SCFD1-218ENST00000556256 OR2L8Q8NGY9 312 aa1.62□□□□□ -2.15
SCFD1-218ENST00000556256 FAM81AQ8TBF8 368 aa1.62□□□□□ -2.15
SCFD1-218ENST00000556256 PIFOQ8TCI5 191 aa1.62□□□□□ -2.15
SCFD1-218ENST00000556256 ESR2Q92731 530 aa1.62□□□□□ -2.15
SCFD1-218ENST00000556256 TMEM230Q96A57 120 aa1.62□□□□□ -2.15
SCFD1-218ENST00000556256 NEURL3Q96EH8 262 aa1.62□□□□□ -2.15
SCFD1-218ENST00000556256 NARS2Q96I59 477 aaKnown RBP1.62□□□□□ -2.15
SCFD1-218ENST00000556256 SPIN2AQ99865 258 aa1.62□□□□□ -2.15
SCFD1-218ENST00000556256 MICU1Q9BPX6 476 aa1.62□□□□□ -2.15
SCFD1-218ENST00000556256 SPIN2BQ9BPZ2 258 aa1.62□□□□□ -2.15
SCFD1-218ENST00000556256 AUNIPQ9H7T9 357 aa1.62□□□□□ -2.15
SCFD1-218ENST00000556256 VPS37BQ9H9H4 285 aa1.62□□□□□ -2.15
SCFD1-218ENST00000556256 RETNQ9HD89 108 aa1.62□□□□□ -2.15
SCFD1-218ENST00000556256 SAMSN1Q9NSI8 373 aaKnown RBP1.62□□□□□ -2.15
SCFD1-218ENST00000556256 FAM49BQ9NUQ9 324 aa1.62□□□□□ -2.15
SCFD1-218ENST00000556256 GCNT4Q9P109 453 aa1.62□□□□□ -2.15
SCFD1-218ENST00000556256 CLN8Q9UBY8 286 aa1.62□□□□□ -2.15
SCFD1-218ENST00000556256 TSSC4Q9Y5U2 329 aaPredicted RBP1.62□□□□□ -2.15
SCFD1-218ENST00000556256 RFNGQ9Y644 331 aa1.62□□□□□ -2.15
SCFD1-218ENST00000556256 TMEM14AQ9Y6G1 99 aa1.62□□□□□ -2.15
SCFD1-218ENST00000556256 PTPRTO14522 1441 aa1.62□□□□□ -2.15
SCFD1-218ENST00000556256 TNS2Q63HR2 1409 aa1.62□□□□□ -2.15
SCFD1-218ENST00000556256 KCNE1BA0A087WTH5 132 aa1.61□□□□□ -2.15
SCFD1-218ENST00000556256 A0A1B0GW55 424 aa1.61□□□□□ -2.15
SCFD1-218ENST00000556256 SERTM2A0A1B0GWG4 89 aa1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms