RNA–Protein interactions for RNA: ENST00000556170.5

NEK9-209, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 3,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-209ENST00000556170 SLAMF6Q96DU3 332 aa13.35□□□□□ -0.27
NEK9-209ENST00000556170 LRRK1Q38SD2 2015 aa13.35□□□□□ -0.27
NEK9-209ENST00000556170 TMEM82A0PJX8 343 aa13.35□□□□□ -0.27
NEK9-209ENST00000556170 SLC22A23A1A5C7 686 aa13.35□□□□□ -0.27
NEK9-209ENST00000556170 GGT3PA6NGU5 568 aa13.35□□□□□ -0.27
NEK9-209ENST00000556170 F5H0A9 414 aaPredicted RBP13.35□□□□□ -0.27
NEK9-209ENST00000556170 KNG1P01042 644 aa13.35□□□□□ -0.27
NEK9-209ENST00000556170 CSNK1A1P48729 337 aa13.35□□□□□ -0.27
NEK9-209ENST00000556170 EGR3Q06889 387 aa13.35□□□□□ -0.27
NEK9-209ENST00000556170 TNK1Q13470 666 aa13.35□□□□□ -0.27
NEK9-209ENST00000556170 TRIM61Q5EBN2 209 aa13.35□□□□□ -0.27
NEK9-209ENST00000556170 B3GNTL1Q67FW5 361 aaPredicted RBP13.35□□□□□ -0.27
NEK9-209ENST00000556170 TMEM71Q6P5X7 295 aa13.35□□□□□ -0.27
NEK9-209ENST00000556170 CPEB2Q7Z5Q1 589 aaKnown RBP13.35□□□□□ -0.27
NEK9-209ENST00000556170 TRAPPC6BQ86SZ2 158 aa13.35□□□□□ -0.27
NEK9-209ENST00000556170 ZNF485Q8NCK3 441 aa13.35□□□□□ -0.27
NEK9-209ENST00000556170 CADM4Q8NFZ8 388 aa13.35□□□□□ -0.27
NEK9-209ENST00000556170 OR11H7Q8NGC8 314 aa13.35□□□□□ -0.27
NEK9-209ENST00000556170 CMBLQ96DG6 245 aa13.35□□□□□ -0.27
NEK9-209ENST00000556170 CHST11Q9NPF2 352 aa13.35□□□□□ -0.27
NEK9-209ENST00000556170 NSG1A0A0A6YYJ2 146 aa13.34□□□□□ -0.27
NEK9-209ENST00000556170 OR4C45A6NMZ5 311 aa13.34□□□□□ -0.27
NEK9-209ENST00000556170 LYPD3O95274 346 aa13.34□□□□□ -0.27
NEK9-209ENST00000556170 BDKRB2P30411 391 aa13.34□□□□□ -0.27
NEK9-209ENST00000556170 EFNB2P52799 333 aa13.34□□□□□ -0.27
NEK9-209ENST00000556170 PMPCAQ10713 525 aa13.34□□□□□ -0.27
NEK9-209ENST00000556170 CREB3L2Q70SY1 520 aa13.34□□□□□ -0.27
NEK9-209ENST00000556170 GDF15Q99988 308 aa13.34□□□□□ -0.27
NEK9-209ENST00000556170 FOXJ3Q9UPW0 622 aa13.34□□□□□ -0.27
NEK9-209ENST00000556170 RHBDD3Q9Y3P4 386 aa13.34□□□□□ -0.27
NEK9-209ENST00000556170 ETV7Q9Y603 341 aa13.34□□□□□ -0.27
NEK9-209ENST00000556170 CHD9Q3L8U1 2897 aa13.34□□□□□ -0.27
NEK9-209ENST00000556170 TCRBV16S1A1N1A0A5B0 115 aa13.34□□□□□ -0.27
NEK9-209ENST00000556170 RAF1P04049 648 aa13.34□□□□□ -0.27
NEK9-209ENST00000556170 AMY2BP19961 511 aa13.34□□□□□ -0.27
NEK9-209ENST00000556170 DYRK1AQ13627 763 aa13.34□□□□□ -0.27
NEK9-209ENST00000556170 ELP2Q6IA86 826 aa13.34□□□□□ -0.27
NEK9-209ENST00000556170 C12orf45Q8N5I9 185 aaPredicted RBP13.34□□□□□ -0.27
NEK9-209ENST00000556170 RHBDD1Q8TEB9 315 aa13.34□□□□□ -0.27
NEK9-209ENST00000556170 CCDC74BQ96LY2 380 aa13.34□□□□□ -0.27
NEK9-209ENST00000556170 GNRHR2Q96P88 292 aa13.34□□□□□ -0.27
NEK9-209ENST00000556170 MNTQ99583 582 aa13.34□□□□□ -0.27
NEK9-209ENST00000556170 SMOC1Q9H4F8 434 aa13.34□□□□□ -0.27
NEK9-209ENST00000556170 IGHV3-9P01782 118 aa13.34□□□□□ -0.27
NEK9-209ENST00000556170 SFTPBP07988 381 aa13.34□□□□□ -0.27
NEK9-209ENST00000556170 TAS2R19P59542 299 aa13.34□□□□□ -0.27
NEK9-209ENST00000556170 IL13RA1P78552 427 aa13.34□□□□□ -0.27
NEK9-209ENST00000556170 GSG1Q2KHT4 349 aa13.34□□□□□ -0.27
NEK9-209ENST00000556170 C3P1Q6ZMU1 363 aa13.34□□□□□ -0.27
NEK9-209ENST00000556170 RHOUQ7L0Q8 258 aa13.34□□□□□ -0.27
NEK9-209ENST00000556170 AGBL5Q8NDL9 886 aa13.34□□□□□ -0.27
NEK9-209ENST00000556170 ZNF680Q8NEM1 530 aa13.34□□□□□ -0.27
NEK9-209ENST00000556170 CCNL2Q96S94 520 aaPredicted RBP13.34□□□□□ -0.27
NEK9-209ENST00000556170 LCATP04180 440 aa13.33□□□□□ -0.27
NEK9-209ENST00000556170 QDPRP09417 244 aa13.33□□□□□ -0.27
NEK9-209ENST00000556170 CSF2RBP32927 897 aa13.33□□□□□ -0.27
NEK9-209ENST00000556170 MYBPHQ13203 477 aa13.33□□□□□ -0.27
NEK9-209ENST00000556170 HLA-BQ31612 363 aa13.33□□□□□ -0.27
NEK9-209ENST00000556170 PLA1AQ53H76 456 aa13.33□□□□□ -0.27
NEK9-209ENST00000556170 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.33□□□□□ -0.27
NEK9-209ENST00000556170 BATF2Q8N1L9 274 aa13.33□□□□□ -0.27
NEK9-209ENST00000556170 OR51T1Q8NGJ9 327 aa13.33□□□□□ -0.27
NEK9-209ENST00000556170 NAT6Q93015 286 aa13.33□□□□□ -0.27
NEK9-209ENST00000556170 SLC5A6Q9Y289 635 aa13.33□□□□□ -0.27
NEK9-209ENST00000556170 SCGB1D2O95969 90 aa13.33□□□□□ -0.28
NEK9-209ENST00000556170 SERPINA2P20848 420 aa13.33□□□□□ -0.28
NEK9-209ENST00000556170 NFYAP23511 347 aaPredicted RBP13.33□□□□□ -0.28
NEK9-209ENST00000556170 ZNF93P35789 620 aaPredicted RBP13.33□□□□□ -0.28
NEK9-209ENST00000556170 APOBEC1P41238 236 aaKnown RBP13.33□□□□□ -0.28
NEK9-209ENST00000556170 PRSS12P56730 875 aa13.33□□□□□ -0.28
NEK9-209ENST00000556170 STX12Q86Y82 276 aa13.33□□□□□ -0.28
NEK9-209ENST00000556170 OR10K1Q8NGX5 313 aa13.33□□□□□ -0.28
NEK9-209ENST00000556170 ELP5Q8TE02 316 aa13.33□□□□□ -0.28
NEK9-209ENST00000556170 C11orf40Q8WZ69 217 aa13.33□□□□□ -0.28
NEK9-209ENST00000556170 SCPEP1Q9HB40 452 aa13.33□□□□□ -0.28
NEK9-209ENST00000556170 TEX13DA0A0J9YY54 714 aaPredicted RBP13.33□□□□□ -0.28
NEK9-209ENST00000556170 RGS11O94810 467 aa13.33□□□□□ -0.28
NEK9-209ENST00000556170 P04436 131 aa13.33□□□□□ -0.28
NEK9-209ENST00000556170 MFGE8Q08431 387 aaPredicted RBP13.33□□□□□ -0.28
NEK9-209ENST00000556170 LINC01590Q5TEZ4 76 aa13.33□□□□□ -0.28
NEK9-209ENST00000556170 ZNF454Q8N9F8 522 aa13.33□□□□□ -0.28
NEK9-209ENST00000556170 OR6M1Q8NGM8 313 aa13.33□□□□□ -0.28
NEK9-209ENST00000556170 OR1J4Q8NGS1 313 aa13.33□□□□□ -0.28
NEK9-209ENST00000556170 SFXN2Q96NB2 322 aa13.33□□□□□ -0.28
NEK9-209ENST00000556170 SORCS2Q96PQ0 1159 aa13.33□□□□□ -0.28
NEK9-209ENST00000556170 URM1Q9BTM9 101 aaKnown RBP13.33□□□□□ -0.28
NEK9-209ENST00000556170 SLC39A1Q9NY26 324 aa13.33□□□□□ -0.28
NEK9-209ENST00000556170 TAS2R5Q9NYW4 299 aa13.33□□□□□ -0.28
NEK9-209ENST00000556170 FAM230AA0A1W2PPH8 454 aa13.32□□□□□ -0.28
NEK9-209ENST00000556170 RAB19A4D1S5 217 aa13.32□□□□□ -0.28
NEK9-209ENST00000556170 ASAH2BP0C7U1 165 aa13.32□□□□□ -0.28
NEK9-209ENST00000556170 GABREP78334 506 aa13.32□□□□□ -0.28
NEK9-209ENST00000556170 PLAURQ03405 335 aa13.32□□□□□ -0.28
NEK9-209ENST00000556170 NHLRC1Q6VVB1 395 aa13.32□□□□□ -0.28
NEK9-209ENST00000556170 MISPQ8IVT2 679 aa13.32□□□□□ -0.28
NEK9-209ENST00000556170 ZBTB8AQ96BR9 441 aa13.32□□□□□ -0.28
NEK9-209ENST00000556170 KCNJ15Q99712 375 aa13.32□□□□□ -0.28
NEK9-209ENST00000556170 DNAJC13O75165 2243 aa13.32□□□□□ -0.28
NEK9-209ENST00000556170 CIB4A0PJX0 185 aa13.32□□□□□ -0.28
NEK9-209ENST00000556170 PLPP3O14495 311 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms