RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 HCCSP53701 268 aa10.85□□□□□ -0.67
SHMT2-221ENST00000555773 TUBA1BP68363 451 aa10.85□□□□□ -0.67
SHMT2-221ENST00000555773 TUBA4AP68366 448 aa10.85□□□□□ -0.67
SHMT2-221ENST00000555773 SLC35A2P78381 396 aa10.85□□□□□ -0.67
SHMT2-221ENST00000555773 ROM1Q03395 351 aa10.85□□□□□ -0.67
SHMT2-221ENST00000555773 EGR3Q06889 387 aa10.85□□□□□ -0.67
SHMT2-221ENST00000555773 RNLSQ5VYX0 342 aa10.85□□□□□ -0.67
SHMT2-221ENST00000555773 ZNF774Q6NX45 483 aa10.85□□□□□ -0.67
SHMT2-221ENST00000555773 ZNF322Q6U7Q0 402 aaPredicted RBP10.85□□□□□ -0.67
SHMT2-221ENST00000555773 C22orf34Q6ZV56 151 aa10.85□□□□□ -0.67
SHMT2-221ENST00000555773 TUBA1AQ71U36 451 aa10.85□□□□□ -0.67
SHMT2-221ENST00000555773 VASH1Q7L8A9 365 aaPredicted RBP10.85□□□□□ -0.67
SHMT2-221ENST00000555773 KCTD20Q7Z5Y7 419 aa10.85□□□□□ -0.67
SHMT2-221ENST00000555773 DMRTC2Q8IXT2 367 aaPredicted RBP10.85□□□□□ -0.67
SHMT2-221ENST00000555773 ACBD4Q8NC06 268 aa10.85□□□□□ -0.67
SHMT2-221ENST00000555773 OR1J2Q8NGS2 313 aa10.85□□□□□ -0.67
SHMT2-221ENST00000555773 OR1F12Q8NHA8 337 aa10.85□□□□□ -0.67
SHMT2-221ENST00000555773 LINC01560Q8TB33 94 aa10.85□□□□□ -0.67
SHMT2-221ENST00000555773 FAM222BQ8WU58 562 aa10.85□□□□□ -0.67
SHMT2-221ENST00000555773 SMAP2Q8WU79 429 aaPredicted RBP10.85□□□□□ -0.67
SHMT2-221ENST00000555773 SLAMF6Q96DU3 332 aa10.85□□□□□ -0.67
SHMT2-221ENST00000555773 COQ7Q99807 217 aa10.85□□□□□ -0.67
SHMT2-221ENST00000555773 SPOCK3Q9BQ16 436 aa10.85□□□□□ -0.67
SHMT2-221ENST00000555773 MROQ9BYG7 248 aa10.85□□□□□ -0.67
SHMT2-221ENST00000555773 DDX28Q9NUL7 540 aaKnown RBP10.85□□□□□ -0.67
SHMT2-221ENST00000555773 MYRFQ9Y2G1 1151 aa10.85□□□□□ -0.67
SHMT2-221ENST00000555773 EXOSC1Q9Y3B2 195 aaKnown RBP10.85□□□□□ -0.67
SHMT2-221ENST00000555773 CACNA1CQ13936 2221 aa10.84□□□□□ -0.67
SHMT2-221ENST00000555773 OR6C6A6NF89 314 aa10.84□□□□□ -0.67
SHMT2-221ENST00000555773 ZNF878C9JN71 531 aa10.84□□□□□ -0.67
SHMT2-221ENST00000555773 PRSS44E7EML9 344 aa10.84□□□□□ -0.67
SHMT2-221ENST00000555773 SYNGR3O43761 229 aa10.84□□□□□ -0.67
SHMT2-221ENST00000555773 DOK2O60496 412 aa10.84□□□□□ -0.67
SHMT2-221ENST00000555773 SULT1C4O75897 302 aa10.84□□□□□ -0.67
SHMT2-221ENST00000555773 APOC1P02654 83 aa10.84□□□□□ -0.67
SHMT2-221ENST00000555773 CDK1P06493 297 aa10.84□□□□□ -0.67
SHMT2-221ENST00000555773 TACSTD2P09758 323 aa10.84□□□□□ -0.67
SHMT2-221ENST00000555773 PSKH1P11801 424 aa10.84□□□□□ -0.67
SHMT2-221ENST00000555773 ZNF14P17017 642 aaPredicted RBP10.84□□□□□ -0.67
SHMT2-221ENST00000555773 MYL12AP19105 171 aa10.84□□□□□ -0.67
SHMT2-221ENST00000555773 PTAFRP25105 342 aa10.84□□□□□ -0.67
SHMT2-221ENST00000555773 STOMP27105 288 aa10.84□□□□□ -0.67
SHMT2-221ENST00000555773 DCTDP32321 178 aa10.84□□□□□ -0.67
SHMT2-221ENST00000555773 APLNRP35414 380 aa10.84□□□□□ -0.67
SHMT2-221ENST00000555773 CHN2P52757 468 aa10.84□□□□□ -0.67
SHMT2-221ENST00000555773 GRB2P62993 217 aaKnown RBP10.84□□□□□ -0.67
SHMT2-221ENST00000555773 GALEQ14376 348 aa10.84□□□□□ -0.67
SHMT2-221ENST00000555773 RAB39AQ14964 217 aa10.84□□□□□ -0.67
SHMT2-221ENST00000555773 TAF13Q15543 124 aa10.84□□□□□ -0.67
SHMT2-221ENST00000555773 TMEM154Q6P9G4 183 aa10.84□□□□□ -0.67
SHMT2-221ENST00000555773 TMEM108Q6UXF1 575 aa10.84□□□□□ -0.67
SHMT2-221ENST00000555773 CFAP77Q6ZQR2 320 aa10.84□□□□□ -0.67
SHMT2-221ENST00000555773 PLEKHG7Q6ZR37 379 aa10.84□□□□□ -0.67
SHMT2-221ENST00000555773 AHSA2Q719I0 299 aa10.84□□□□□ -0.67
SHMT2-221ENST00000555773 KRT77Q7Z794 578 aa10.84□□□□□ -0.67
SHMT2-221ENST00000555773 WFDC8Q8IUA0 241 aa10.84□□□□□ -0.67
SHMT2-221ENST00000555773 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.84□□□□□ -0.67
SHMT2-221ENST00000555773 ZNF679Q8IYX0 411 aa10.84□□□□□ -0.67
SHMT2-221ENST00000555773 CPEB3Q8NE35 698 aaKnown RBP10.84□□□□□ -0.67
SHMT2-221ENST00000555773 AKR7LQ8NHP1 331 aa10.84□□□□□ -0.67
SHMT2-221ENST00000555773 SNX33Q8WV41 574 aa10.84□□□□□ -0.67
SHMT2-221ENST00000555773 OR8B4Q96RC9 309 aa10.84□□□□□ -0.67
SHMT2-221ENST00000555773 NR1H4Q96RI1 486 aaPredicted RBP10.84□□□□□ -0.67
SHMT2-221ENST00000555773 DCLRE1CQ96SD1 692 aaKnown RBP10.84□□□□□ -0.67
SHMT2-221ENST00000555773 ATF6BQ99941 703 aa10.84□□□□□ -0.67
SHMT2-221ENST00000555773 C1QTNF6Q9BXI9 259 aa10.84□□□□□ -0.67
SHMT2-221ENST00000555773 NIPAL2Q9H841 368 aa10.84□□□□□ -0.67
SHMT2-221ENST00000555773 NOX3Q9HBY0 568 aa10.84□□□□□ -0.67
SHMT2-221ENST00000555773 PNRC2Q9NPJ4 139 aaKnown RBP10.84□□□□□ -0.67
SHMT2-221ENST00000555773 CENPMQ9NSP4 180 aa10.84□□□□□ -0.67
SHMT2-221ENST00000555773 COPS3Q9UNS2 423 aa10.84□□□□□ -0.67
SHMT2-221ENST00000555773 ANKHD1Q8IWZ3 2542 aaKnown RBP10.84□□□□□ -0.67
SHMT2-221ENST00000555773 C19orf84I3L1E1 186 aa10.83□□□□□ -0.68
SHMT2-221ENST00000555773 RGS10O43665 173 aa10.83□□□□□ -0.68
SHMT2-221ENST00000555773 H2BFMP0C1H6 154 aa10.83□□□□□ -0.68
SHMT2-221ENST00000555773 CRYGSP22914 178 aa10.83□□□□□ -0.68
SHMT2-221ENST00000555773 EEF1B2P24534 225 aaKnown RBP10.83□□□□□ -0.68
SHMT2-221ENST00000555773 OPRL1P41146 370 aa10.83□□□□□ -0.68
SHMT2-221ENST00000555773 HTR5AP47898 357 aa10.83□□□□□ -0.68
SHMT2-221ENST00000555773 GDI2P50395 445 aaKnown RBP10.83□□□□□ -0.68
SHMT2-221ENST00000555773 ZNF83P51522 516 aa10.83□□□□□ -0.68
SHMT2-221ENST00000555773 IDH3GP51553 393 aaPredicted RBP10.83□□□□□ -0.68
SHMT2-221ENST00000555773 GABARAPL2P60520 117 aa10.83□□□□□ -0.68
SHMT2-221ENST00000555773 ACTA2P62736 377 aa10.83□□□□□ -0.68
SHMT2-221ENST00000555773 ACTG2P63267 376 aa10.83□□□□□ -0.68
SHMT2-221ENST00000555773 ZNF85Q03923 595 aa10.83□□□□□ -0.68
SHMT2-221ENST00000555773 TBC1D28Q2M2D7 210 aa10.83□□□□□ -0.68
SHMT2-221ENST00000555773 ZNF684Q5T5D7 378 aa10.83□□□□□ -0.68
SHMT2-221ENST00000555773 ALKBH2Q6NS38 261 aa10.83□□□□□ -0.68
SHMT2-221ENST00000555773 ARL9Q6T311 187 aa10.83□□□□□ -0.68
SHMT2-221ENST00000555773 SEZ6L2Q6UXD5 910 aa10.83□□□□□ -0.68
SHMT2-221ENST00000555773 TMPRSS11AQ6ZMR5 421 aa10.83□□□□□ -0.68
SHMT2-221ENST00000555773 PRSS48Q7RTY5 328 aa10.83□□□□□ -0.68
SHMT2-221ENST00000555773 ZNF584Q8IVC4 421 aa10.83□□□□□ -0.68
SHMT2-221ENST00000555773 SYS1Q8N2H4 156 aa10.83□□□□□ -0.68
SHMT2-221ENST00000555773 SLC30A7Q8NEW0 376 aa10.83□□□□□ -0.68
SHMT2-221ENST00000555773 OR10S1Q8NGN2 331 aa10.83□□□□□ -0.68
SHMT2-221ENST00000555773 SPTSSAQ969W0 71 aa10.83□□□□□ -0.68
SHMT2-221ENST00000555773 ZC3HAV1LQ96H79 300 aaKnown RBP10.83□□□□□ -0.68
SHMT2-221ENST00000555773 POM121L2Q96KW2 1035 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms