RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 ZNRF4Q8WWF5 429 aa9.81□□□□□ -0.84
SHMT2-220ENST00000555634 RNASE6Q93091 150 aaKnown RBP9.81□□□□□ -0.84
SHMT2-220ENST00000555634 ZNF837Q96EG3 531 aaPredicted RBP9.81□□□□□ -0.84
SHMT2-220ENST00000555634 C4orf36Q96KX1 117 aa9.81□□□□□ -0.84
SHMT2-220ENST00000555634 OR8B4Q96RC9 309 aa9.81□□□□□ -0.84
SHMT2-220ENST00000555634 COQ7Q99807 217 aa9.81□□□□□ -0.84
SHMT2-220ENST00000555634 RHNO1Q9BSD3 238 aa9.81□□□□□ -0.84
SHMT2-220ENST00000555634 TTTY10Q9BZA0 68 aa9.81□□□□□ -0.84
SHMT2-220ENST00000555634 SLC17A5Q9NRA2 495 aa9.81□□□□□ -0.84
SHMT2-220ENST00000555634 PAK1IP1Q9NWT1 392 aaPredicted RBP9.81□□□□□ -0.84
SHMT2-220ENST00000555634 NDRG3Q9UGV2 375 aa9.81□□□□□ -0.84
SHMT2-220ENST00000555634 KALRNO60229 2985 aa9.81□□□□□ -0.84
SHMT2-220ENST00000555634 POLEQ07864 2286 aa9.8□□□□□ -0.84
SHMT2-220ENST00000555634 ALPK2Q86TB3 2170 aa9.8□□□□□ -0.84
SHMT2-220ENST00000555634 METTL15A6NJ78 407 aa9.8□□□□□ -0.84
SHMT2-220ENST00000555634 C1QL1O75973 258 aa9.8□□□□□ -0.84
SHMT2-220ENST00000555634 AGFG2O95081 481 aa9.8□□□□□ -0.84
SHMT2-220ENST00000555634 CLDN14O95500 239 aa9.8□□□□□ -0.84
SHMT2-220ENST00000555634 HLA-HP01893 362 aa9.8□□□□□ -0.84
SHMT2-220ENST00000555634 HTR1AP08908 422 aa9.8□□□□□ -0.84
SHMT2-220ENST00000555634 HSMCR30P0CW71 290 aa9.8□□□□□ -0.84
SHMT2-220ENST00000555634 COX5BP10606 129 aa9.8□□□□□ -0.84
SHMT2-220ENST00000555634 ZNF32P17041 273 aa9.8□□□□□ -0.84
SHMT2-220ENST00000555634 PSMB9P28065 219 aa9.8□□□□□ -0.84
SHMT2-220ENST00000555634 C21orf33P30042 268 aaPredicted RBP9.8□□□□□ -0.84
SHMT2-220ENST00000555634 UGT2B10P36537 528 aa9.8□□□□□ -0.84
SHMT2-220ENST00000555634 RPS27P42677 84 aaKnown RBP9.8□□□□□ -0.84
SHMT2-220ENST00000555634 GDI2P50395 445 aaKnown RBP9.8□□□□□ -0.84
SHMT2-220ENST00000555634 ETV1P50549 477 aa9.8□□□□□ -0.84
SHMT2-220ENST00000555634 NR1H2P55055 460 aa9.8□□□□□ -0.84
SHMT2-220ENST00000555634 CDH15P55291 814 aa9.8□□□□□ -0.84
SHMT2-220ENST00000555634 TPTEP56180 551 aa9.8□□□□□ -0.84
SHMT2-220ENST00000555634 PSMA6P60900 246 aaKnown RBP9.8□□□□□ -0.84
SHMT2-220ENST00000555634 RAB1AP62820 205 aa9.8□□□□□ -0.84
SHMT2-220ENST00000555634 ADORA2A-AS1P86434 159 aa9.8□□□□□ -0.84
SHMT2-220ENST00000555634 BDH1Q02338 343 aa9.8□□□□□ -0.84
SHMT2-220ENST00000555634 ROM1Q03395 351 aa9.8□□□□□ -0.84
SHMT2-220ENST00000555634 PIGFQ07326 219 aa9.8□□□□□ -0.84
SHMT2-220ENST00000555634 PPA1Q15181 289 aa9.8□□□□□ -0.84
SHMT2-220ENST00000555634 SPHARQ15513 63 aa9.8□□□□□ -0.84
SHMT2-220ENST00000555634 FBXL19-AS1Q494R0 122 aa9.8□□□□□ -0.84
SHMT2-220ENST00000555634 CDONQ4KMG0 1287 aa9.8□□□□□ -0.84
SHMT2-220ENST00000555634 PABPC1L2AQ5JQF8 200 aa9.8□□□□□ -0.84
SHMT2-220ENST00000555634 ZNF474Q6S9Z5 364 aaPredicted RBP9.8□□□□□ -0.84
SHMT2-220ENST00000555634 STAC2Q6ZMT1 411 aa9.8□□□□□ -0.84
SHMT2-220ENST00000555634 CFAP77Q6ZQR2 320 aa9.8□□□□□ -0.84
SHMT2-220ENST00000555634 SPATC1Q76KD6 591 aa9.8□□□□□ -0.84
SHMT2-220ENST00000555634 SKA3Q8IX90 412 aa9.8□□□□□ -0.84
SHMT2-220ENST00000555634 SPARTQ8N0X7 666 aa9.8□□□□□ -0.84
SHMT2-220ENST00000555634 ZNF283Q8N7M2 679 aa9.8□□□□□ -0.84
SHMT2-220ENST00000555634 LILRB4Q8NHJ6 448 aa9.8□□□□□ -0.84
SHMT2-220ENST00000555634 ST7LQ8TDW4 575 aa9.8□□□□□ -0.84
SHMT2-220ENST00000555634 RNF133Q8WVZ7 376 aa9.8□□□□□ -0.84
SHMT2-220ENST00000555634 HSD17B8Q92506 261 aa9.8□□□□□ -0.84
SHMT2-220ENST00000555634 HTRA1Q92743 480 aa9.8□□□□□ -0.84
SHMT2-220ENST00000555634 BCL2L2Q92843 193 aaPredicted RBP9.8□□□□□ -0.84
SHMT2-220ENST00000555634 UFD1Q92890 307 aa9.8□□□□□ -0.84
SHMT2-220ENST00000555634 S100PBPQ96BU1 408 aa9.8□□□□□ -0.84
SHMT2-220ENST00000555634 BOD1Q96IK1 185 aa9.8□□□□□ -0.84
SHMT2-220ENST00000555634 DCLRE1CQ96SD1 692 aaKnown RBP9.8□□□□□ -0.84
SHMT2-220ENST00000555634 MED18Q9BUE0 208 aa9.8□□□□□ -0.84
SHMT2-220ENST00000555634 OR2H1Q9GZK4 316 aa9.8□□□□□ -0.84
SHMT2-220ENST00000555634 COMMD4Q9H0A8 199 aa9.8□□□□□ -0.84
SHMT2-220ENST00000555634 CDH20Q9HBT6 801 aa9.8□□□□□ -0.84
SHMT2-220ENST00000555634 ACOT13Q9NPJ3 140 aa9.8□□□□□ -0.84
SHMT2-220ENST00000555634 DDX28Q9NUL7 540 aaKnown RBP9.8□□□□□ -0.84
SHMT2-220ENST00000555634 JKAMPQ9P055 326 aa9.8□□□□□ -0.84
SHMT2-220ENST00000555634 LRP12Q9Y561 859 aa9.8□□□□□ -0.84
SHMT2-220ENST00000555634 CACNA1CQ13936 2221 aa9.79□□□□□ -0.84
SHMT2-220ENST00000555634 DIDO1Q9BTC0 2240 aaKnown RBP9.79□□□□□ -0.84
SHMT2-220ENST00000555634 HCFC1P51610 2035 aa9.79□□□□□ -0.84
SHMT2-220ENST00000555634 LOC110117498-PIK3R3F6TDL0 507 aa9.79□□□□□ -0.84
SHMT2-220ENST00000555634 J3QRE1 110 aa9.79□□□□□ -0.84
SHMT2-220ENST00000555634 RER1O15258 196 aa9.79□□□□□ -0.84
SHMT2-220ENST00000555634 ANXA2P07355 339 aaKnown RBP9.79□□□□□ -0.84
SHMT2-220ENST00000555634 LIMS3P0CW19 117 aa9.79□□□□□ -0.84
SHMT2-220ENST00000555634 LIMS4P0CW20 117 aa9.79□□□□□ -0.84
SHMT2-220ENST00000555634 DCTDP32321 178 aa9.79□□□□□ -0.84
SHMT2-220ENST00000555634 CX3CR1P49238 355 aa9.79□□□□□ -0.84
SHMT2-220ENST00000555634 GALK2Q01415 458 aa9.79□□□□□ -0.84
SHMT2-220ENST00000555634 ZNF85Q03923 595 aa9.79□□□□□ -0.84
SHMT2-220ENST00000555634 CCDC58Q4VC31 144 aa9.79□□□□□ -0.84
SHMT2-220ENST00000555634 TP53I3Q53FA7 332 aa9.79□□□□□ -0.84
SHMT2-220ENST00000555634 BCL2L15Q5TBC7 163 aa9.79□□□□□ -0.84
SHMT2-220ENST00000555634 LRRN1Q6UXK5 716 aa9.79□□□□□ -0.84
SHMT2-220ENST00000555634 KCTD8Q6ZWB6 473 aa9.79□□□□□ -0.84
SHMT2-220ENST00000555634 VASH1Q7L8A9 365 aaPredicted RBP9.79□□□□□ -0.84
SHMT2-220ENST00000555634 COMMD2Q86X83 199 aa9.79□□□□□ -0.84
SHMT2-220ENST00000555634 NANOGP1Q8N7R0 232 aa9.79□□□□□ -0.84
SHMT2-220ENST00000555634 OR1F12Q8NHA8 337 aa9.79□□□□□ -0.84
SHMT2-220ENST00000555634 SPRYD4Q8WW59 207 aaPredicted RBP9.79□□□□□ -0.84
SHMT2-220ENST00000555634 THRSPQ92748 146 aa9.79□□□□□ -0.84
SHMT2-220ENST00000555634 FBXO17Q96EF6 278 aa9.79□□□□□ -0.84
SHMT2-220ENST00000555634 COG8Q96MW5 612 aa9.79□□□□□ -0.84
SHMT2-220ENST00000555634 DOK1Q99704 481 aa9.79□□□□□ -0.84
SHMT2-220ENST00000555634 KCNJ15Q99712 375 aa9.79□□□□□ -0.84
SHMT2-220ENST00000555634 SLC24A3Q9HC58 644 aa9.79□□□□□ -0.84
SHMT2-220ENST00000555634 ACOXLQ9NUZ1 547 aa9.79□□□□□ -0.84
SHMT2-220ENST00000555634 EIF3KQ9UBQ5 218 aaKnown RBP9.79□□□□□ -0.84
SHMT2-220ENST00000555634 COPS3Q9UNS2 423 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms