RNA–Protein interactions for RNA: ENST00000555569.1

PCNX4-209, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 515 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-209ENST00000555569 LRRC37BQ96QE4 947 aa11.73□□□□□ -0.53
PCNX4-209ENST00000555569 DIRC2Q96SL1 478 aa11.73□□□□□ -0.53
PCNX4-209ENST00000555569 REPIN1Q9BWE0 567 aaKnown RBP11.73□□□□□ -0.53
PCNX4-209ENST00000555569 POFUT1Q9H488 388 aa11.73□□□□□ -0.53
PCNX4-209ENST00000555569 ZNF665Q9H7R5 613 aa11.73□□□□□ -0.53
PCNX4-209ENST00000555569 TUBG2Q9NRH3 451 aa11.73□□□□□ -0.53
PCNX4-209ENST00000555569 ASH2LQ9UBL3 628 aa11.73□□□□□ -0.53
PCNX4-209ENST00000555569 KLHL21Q9UJP4 597 aa11.73□□□□□ -0.53
PCNX4-209ENST00000555569 ZDHHC8Q9ULC8 765 aa11.73□□□□□ -0.53
PCNX4-209ENST00000555569 GRIP1Q9Y3R0 1128 aa11.73□□□□□ -0.53
PCNX4-209ENST00000555569 WIPI2Q9Y4P8 454 aa11.73□□□□□ -0.53
PCNX4-209ENST00000555569 DCTN3O75935 186 aa11.72□□□□□ -0.53
PCNX4-209ENST00000555569 PPP1R3DO95685 299 aa11.72□□□□□ -0.53
PCNX4-209ENST00000555569 FABP3P05413 133 aa11.72□□□□□ -0.53
PCNX4-209ENST00000555569 CD55P08174 381 aa11.72□□□□□ -0.53
PCNX4-209ENST00000555569 ANPEPP15144 967 aa11.72□□□□□ -0.53
PCNX4-209ENST00000555569 CRABP1P29762 137 aa11.72□□□□□ -0.53
PCNX4-209ENST00000555569 SLC6A6P31641 620 aa11.72□□□□□ -0.53
PCNX4-209ENST00000555569 MXRA7P84157 204 aa11.72□□□□□ -0.53
PCNX4-209ENST00000555569 SRSF2Q01130 221 aaKnown RBP11.72□□□□□ -0.53
PCNX4-209ENST00000555569 KCNMB1Q16558 191 aa11.72□□□□□ -0.53
PCNX4-209ENST00000555569 RFX4Q33E94 735 aa11.72□□□□□ -0.53
PCNX4-209ENST00000555569 CCDC92Q53HC0 331 aaPredicted RBP11.72□□□□□ -0.53
PCNX4-209ENST00000555569 ACSM5Q6NUN0 579 aa11.72□□□□□ -0.53
PCNX4-209ENST00000555569 DNM1P34Q6PK57 102 aa11.72□□□□□ -0.53
PCNX4-209ENST00000555569 C16orf89Q6UX73 402 aa11.72□□□□□ -0.53
PCNX4-209ENST00000555569 OR1F12Q8NHA8 337 aa11.72□□□□□ -0.53
PCNX4-209ENST00000555569 SLC7A6Q92536 515 aa11.72□□□□□ -0.53
PCNX4-209ENST00000555569 CCL17Q92583 94 aa11.72□□□□□ -0.53
PCNX4-209ENST00000555569 OR52D1Q9H346 318 aa11.72□□□□□ -0.53
PCNX4-209ENST00000555569 MSL2Q9HCI7 577 aa11.72□□□□□ -0.53
PCNX4-209ENST00000555569 NDE1Q9NXR1 346 aa11.72□□□□□ -0.53
PCNX4-209ENST00000555569 ATPIF1Q9UII2 106 aa11.72□□□□□ -0.53
PCNX4-209ENST00000555569 PURGQ9UJV8 347 aaKnown RBP11.72□□□□□ -0.53
PCNX4-209ENST00000555569 POLR1DQ9Y2S0 133 aa11.72□□□□□ -0.53
PCNX4-209ENST00000555569 STARD10Q9Y365 291 aa11.72□□□□□ -0.53
PCNX4-209ENST00000555569 ARHGAP32A7KAX9 2087 aa11.71□□□□□ -0.53
PCNX4-209ENST00000555569 TRAV20A0A0B4J274 112 aa11.71□□□□□ -0.53
PCNX4-209ENST00000555569 OR6C6A6NF89 314 aa11.71□□□□□ -0.53
PCNX4-209ENST00000555569 ARPC3O15145 178 aa11.71□□□□□ -0.53
PCNX4-209ENST00000555569 OR10H3O60404 316 aa11.71□□□□□ -0.53
PCNX4-209ENST00000555569 UBOX5O94941 541 aa11.71□□□□□ -0.53
PCNX4-209ENST00000555569 KITLGP21583 273 aa11.71□□□□□ -0.53
PCNX4-209ENST00000555569 FPR3P25089 353 aa11.71□□□□□ -0.53
PCNX4-209ENST00000555569 RRM2P31350 389 aa11.71□□□□□ -0.53
PCNX4-209ENST00000555569 IFNGR2P38484 337 aa11.71□□□□□ -0.53
PCNX4-209ENST00000555569 CENPAP49450 140 aa11.71□□□□□ -0.53
PCNX4-209ENST00000555569 TNFAIP6P98066 277 aaPredicted RBP11.71□□□□□ -0.53
PCNX4-209ENST00000555569 SLC3A1Q07837 685 aa11.71□□□□□ -0.53
PCNX4-209ENST00000555569 CDK5R2Q13319 367 aa11.71□□□□□ -0.53
PCNX4-209ENST00000555569 SPATS1Q496A3 300 aa11.71□□□□□ -0.53
PCNX4-209ENST00000555569 LIPNQ5VXI9 398 aa11.71□□□□□ -0.53
PCNX4-209ENST00000555569 C1orf94Q6P1W5 598 aa11.71□□□□□ -0.53
PCNX4-209ENST00000555569 LEG1Q6P5S2 330 aa11.71□□□□□ -0.53
PCNX4-209ENST00000555569 PGM2L1Q6PCE3 622 aa11.71□□□□□ -0.53
PCNX4-209ENST00000555569 JAZF1Q86VZ6 243 aa11.71□□□□□ -0.53
PCNX4-209ENST00000555569 ZDHHC21Q8IVQ6 265 aa11.71□□□□□ -0.53
PCNX4-209ENST00000555569 DEFB107AQ8IZN7 70 aa11.71□□□□□ -0.53
PCNX4-209ENST00000555569 RFLNBQ8N5W9 214 aa11.71□□□□□ -0.53
PCNX4-209ENST00000555569 CMBLQ96DG6 245 aa11.71□□□□□ -0.53
PCNX4-209ENST00000555569 COG8Q96MW5 612 aa11.71□□□□□ -0.53
PCNX4-209ENST00000555569 TSSK2Q96PF2 358 aa11.71□□□□□ -0.53
PCNX4-209ENST00000555569 IL1RAPQ9NPH3 570 aa11.71□□□□□ -0.53
PCNX4-209ENST00000555569 TMCC3Q9ULS5 477 aa11.71□□□□□ -0.53
PCNX4-209ENST00000555569 IGLV1-36A0A0B4J1U3 117 aa11.7□□□□□ -0.54
PCNX4-209ENST00000555569 DCTN6O00399 190 aa11.7□□□□□ -0.54
PCNX4-209ENST00000555569 RER1O15258 196 aa11.7□□□□□ -0.54
PCNX4-209ENST00000555569 DEAF1O75398 565 aaPredicted RBP11.7□□□□□ -0.54
PCNX4-209ENST00000555569 GPANK1O95872 356 aa11.7□□□□□ -0.54
PCNX4-209ENST00000555569 RENP00797 406 aa11.7□□□□□ -0.54
PCNX4-209ENST00000555569 IGHV2-5P01817 119 aa11.7□□□□□ -0.54
PCNX4-209ENST00000555569 DBHP09172 617 aa11.7□□□□□ -0.54
PCNX4-209ENST00000555569 HIST1H1CP16403 213 aaKnown RBP11.7□□□□□ -0.54
PCNX4-209ENST00000555569 TNFSF4P23510 183 aa11.7□□□□□ -0.54
PCNX4-209ENST00000555569 GSSP48637 474 aa11.7□□□□□ -0.54
PCNX4-209ENST00000555569 RGS6P49758 472 aa11.7□□□□□ -0.54
PCNX4-209ENST00000555569 MEP1BQ16820 701 aa11.7□□□□□ -0.54
PCNX4-209ENST00000555569 SPRNQ5BIV9 151 aa11.7□□□□□ -0.54
PCNX4-209ENST00000555569 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.7□□□□□ -0.54
PCNX4-209ENST00000555569 GJC3Q8NFK1 279 aa11.7□□□□□ -0.54
PCNX4-209ENST00000555569 OR4K13Q8NH42 304 aa11.7□□□□□ -0.54
PCNX4-209ENST00000555569 GNPDA2Q8TDQ7 276 aa11.7□□□□□ -0.54
PCNX4-209ENST00000555569 HAVCR1Q96D42 359 aa11.7□□□□□ -0.54
PCNX4-209ENST00000555569 SAMD8Q96LT4 415 aa11.7□□□□□ -0.54
PCNX4-209ENST00000555569 DCLRE1CQ96SD1 692 aaKnown RBP11.7□□□□□ -0.54
PCNX4-209ENST00000555569 NMNAT3Q96T66 252 aa11.7□□□□□ -0.54
PCNX4-209ENST00000555569 GAL3ST1Q99999 423 aa11.7□□□□□ -0.54
PCNX4-209ENST00000555569 C19orf24Q9BVV8 132 aa11.7□□□□□ -0.54
PCNX4-209ENST00000555569 IFT27Q9BW83 186 aa11.7□□□□□ -0.54
PCNX4-209ENST00000555569 SRA1Q9HD15 236 aaKnown RBP11.7□□□□□ -0.54
PCNX4-209ENST00000555569 B9D1Q9UPM9 204 aa11.7□□□□□ -0.54
PCNX4-209ENST00000555569 LHFPL6Q9Y693 200 aa11.7□□□□□ -0.54
PCNX4-209ENST00000555569 ISPDA4D126 451 aa11.69□□□□□ -0.54
PCNX4-209ENST00000555569 J3QW42 95 aa11.69□□□□□ -0.54
PCNX4-209ENST00000555569 TCF21O43680 179 aa11.69□□□□□ -0.54
PCNX4-209ENST00000555569 PLPP2O43688 288 aa11.69□□□□□ -0.54
PCNX4-209ENST00000555569 IDH3BO43837 385 aa11.69□□□□□ -0.54
PCNX4-209ENST00000555569 NOS3P29474 1203 aa11.69□□□□□ -0.54
PCNX4-209ENST00000555569 MNAT1P51948 309 aa11.69□□□□□ -0.54
PCNX4-209ENST00000555569 HIST1H3AP68431 136 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms