RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 TRIM36Q9NQ86 728 aa8.94□□□□□ -0.98
SRP54-208ENST00000555557 Q9UFV3 132 aa8.94□□□□□ -0.98
SRP54-208ENST00000555557 OSGIN2Q9Y236 505 aa8.94□□□□□ -0.98
SRP54-208ENST00000555557 SLC5A6Q9Y289 635 aa8.94□□□□□ -0.98
SRP54-208ENST00000555557 LRP12Q9Y561 859 aa8.94□□□□□ -0.98
SRP54-208ENST00000555557 INTS1Q8N201 2190 aaKnown RBP8.94□□□□□ -0.98
SRP54-208ENST00000555557 KALRNO60229 2985 aa8.94□□□□□ -0.98
SRP54-208ENST00000555557 CCRL2O00421 344 aa8.93□□□□□ -0.98
SRP54-208ENST00000555557 RAD51DO75771 328 aa8.93□□□□□ -0.98
SRP54-208ENST00000555557 FARS2O95363 451 aaKnown RBP8.93□□□□□ -0.98
SRP54-208ENST00000555557 PNPP00491 289 aa8.93□□□□□ -0.98
SRP54-208ENST00000555557 HLA-HP01893 362 aa8.93□□□□□ -0.98
SRP54-208ENST00000555557 HNRNPCP07910 306 aaKnown RBP eCLIP8.93□□□□□ -0.985e-7■■■□□ 16.2
SRP54-208ENST00000555557 CST2P09228 141 aa8.93□□□□□ -0.98
SRP54-208ENST00000555557 TACSTD2P09758 323 aa8.93□□□□□ -0.98
SRP54-208ENST00000555557 ZNF32P17041 273 aa8.93□□□□□ -0.98
SRP54-208ENST00000555557 BMP5P22003 454 aa8.93□□□□□ -0.98
SRP54-208ENST00000555557 GADD45AP24522 165 aa8.93□□□□□ -0.98
SRP54-208ENST00000555557 CTSSP25774 331 aa8.93□□□□□ -0.98
SRP54-208ENST00000555557 OPRL1P41146 370 aa8.93□□□□□ -0.98
SRP54-208ENST00000555557 CAPZA2P47755 286 aa8.93□□□□□ -0.98
SRP54-208ENST00000555557 GBX2P52951 348 aaPredicted RBP8.93□□□□□ -0.98
SRP54-208ENST00000555557 NANOS3P60323 173 aaKnown RBP8.93□□□□□ -0.98
SRP54-208ENST00000555557 TUBA1BP68363 451 aa8.93□□□□□ -0.98
SRP54-208ENST00000555557 ROM1Q03395 351 aa8.93□□□□□ -0.98
SRP54-208ENST00000555557 SLC3A1Q07837 685 aa8.93□□□□□ -0.98
SRP54-208ENST00000555557 ACSM1Q08AH1 577 aa8.93□□□□□ -0.98
SRP54-208ENST00000555557 AQP6Q13520 282 aa8.93□□□□□ -0.98
SRP54-208ENST00000555557 CCDC92Q53HC0 331 aaPredicted RBP8.93□□□□□ -0.98
SRP54-208ENST00000555557 SOWAHCQ53LP3 525 aaPredicted RBP8.93□□□□□ -0.98
SRP54-208ENST00000555557 ARL9Q6T311 187 aa8.93□□□□□ -0.98
SRP54-208ENST00000555557 Q6ZT83 130 aa8.93□□□□□ -0.98
SRP54-208ENST00000555557 TUBA1AQ71U36 451 aa8.93□□□□□ -0.98
SRP54-208ENST00000555557 FAM220AQ7Z4H9 259 aa8.93□□□□□ -0.98
SRP54-208ENST00000555557 ABHD12BQ7Z5M8 362 aaPredicted RBP8.93□□□□□ -0.98
SRP54-208ENST00000555557 OR1K1Q8NGR3 316 aa8.93□□□□□ -0.98
SRP54-208ENST00000555557 SLC7A6Q92536 515 aa8.93□□□□□ -0.98
SRP54-208ENST00000555557 UFD1Q92890 307 aa8.93□□□□□ -0.98
SRP54-208ENST00000555557 MRPL48Q96GC5 212 aaKnown RBP8.93□□□□□ -0.98
SRP54-208ENST00000555557 OR51E2Q9H255 320 aa8.93□□□□□ -0.98
SRP54-208ENST00000555557 TBCCD1Q9NVR7 557 aa8.93□□□□□ -0.98
SRP54-208ENST00000555557 ZNF224Q9NZL3 707 aa8.93□□□□□ -0.98
SRP54-208ENST00000555557 ST6GALNAC2Q9UJ37 374 aa8.93□□□□□ -0.98
SRP54-208ENST00000555557 ITGB1BP2Q9UKP3 347 aa8.93□□□□□ -0.98
SRP54-208ENST00000555557 NCOA6Q14686 2063 aaPredicted RBP8.93□□□□□ -0.98
SRP54-208ENST00000555557 POLEQ07864 2286 aa8.93□□□□□ -0.98
SRP54-208ENST00000555557 A0A1W2PR80 420 aa8.93□□□□□ -0.98
SRP54-208ENST00000555557 DOK2O60496 412 aa8.93□□□□□ -0.98
SRP54-208ENST00000555557 CRHP06850 196 aa8.93□□□□□ -0.98
SRP54-208ENST00000555557 H2BFMP0C1H6 154 aa8.93□□□□□ -0.98
SRP54-208ENST00000555557 TTKP33981 857 aa8.93□□□□□ -0.98
SRP54-208ENST00000555557 TGFBR1P36897 503 aa8.93□□□□□ -0.98
SRP54-208ENST00000555557 RIDAP52758 137 aaKnown RBP8.93□□□□□ -0.98
SRP54-208ENST00000555557 RPS25P62851 125 aaKnown RBP8.93□□□□□ -0.98
SRP54-208ENST00000555557 PSG4Q00888 419 aa8.93□□□□□ -0.98
SRP54-208ENST00000555557 GALK2Q01415 458 aa8.93□□□□□ -0.98
SRP54-208ENST00000555557 TPBGQ13641 420 aa8.93□□□□□ -0.98
SRP54-208ENST00000555557 INSL4Q14641 139 aa8.93□□□□□ -0.98
SRP54-208ENST00000555557 ODF4Q2M2E3 257 aa8.93□□□□□ -0.98
SRP54-208ENST00000555557 ZNF774Q6NX45 483 aa8.93□□□□□ -0.98
SRP54-208ENST00000555557 ZNF474Q6S9Z5 364 aaPredicted RBP8.93□□□□□ -0.98
SRP54-208ENST00000555557 SLC16A12Q6ZSM3 486 aa8.93□□□□□ -0.98
SRP54-208ENST00000555557 KCTD20Q7Z5Y7 419 aa8.93□□□□□ -0.98
SRP54-208ENST00000555557 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.93□□□□□ -0.98
SRP54-208ENST00000555557 LIX1LQ8IVB5 337 aa8.93□□□□□ -0.98
SRP54-208ENST00000555557 GABRG1Q8N1C3 465 aa8.93□□□□□ -0.98
SRP54-208ENST00000555557 GJC3Q8NFK1 279 aa8.93□□□□□ -0.98
SRP54-208ENST00000555557 AKR7LQ8NHP1 331 aa8.93□□□□□ -0.98
SRP54-208ENST00000555557 ZFP3Q96NJ6 502 aa8.93□□□□□ -0.98
SRP54-208ENST00000555557 PDCD1LG2Q9BQ51 273 aa8.93□□□□□ -0.98
SRP54-208ENST00000555557 TMED9Q9BVK6 235 aa8.93□□□□□ -0.98
SRP54-208ENST00000555557 RNF167Q9H6Y7 350 aa8.93□□□□□ -0.98
SRP54-208ENST00000555557 ISYNA1Q9NPH2 558 aa8.93□□□□□ -0.98
SRP54-208ENST00000555557 BRD7Q9NPI1 651 aa8.93□□□□□ -0.98
SRP54-208ENST00000555557 PLEK2Q9NYT0 353 aa8.93□□□□□ -0.98
SRP54-208ENST00000555557 RTTNQ86VV8 2226 aa8.93□□□□□ -0.98
SRP54-208ENST00000555557 ARHGAP21Q5T5U3 1957 aa8.92□□□□□ -0.98
SRP54-208ENST00000555557 TRBV2A0A0J9YWF9 115 aa8.92□□□□□ -0.98
SRP54-208ENST00000555557 CIB4A0PJX0 185 aa8.92□□□□□ -0.98
SRP54-208ENST00000555557 ZNF878C9JN71 531 aa8.92□□□□□ -0.98
SRP54-208ENST00000555557 E9PLN8 166 aa8.92□□□□□ -0.98
SRP54-208ENST00000555557 H3BSH0 61 aa8.92□□□□□ -0.98
SRP54-208ENST00000555557 DBHP09172 617 aa8.92□□□□□ -0.98
SRP54-208ENST00000555557 MMP7P09237 267 aaPredicted RBP8.92□□□□□ -0.98
SRP54-208ENST00000555557 CD79AP11912 226 aa8.92□□□□□ -0.98
SRP54-208ENST00000555557 PSMD7P51665 324 aa8.92□□□□□ -0.98
SRP54-208ENST00000555557 PRKXP51817 358 aa8.92□□□□□ -0.98
SRP54-208ENST00000555557 HIST1H3AP68431 136 aa8.92□□□□□ -0.98
SRP54-208ENST00000555557 BDH1Q02338 343 aa8.92□□□□□ -0.98
SRP54-208ENST00000555557 MFGE8Q08431 387 aaPredicted RBP8.92□□□□□ -0.98
SRP54-208ENST00000555557 DCTN2Q13561 401 aaKnown RBP8.92□□□□□ -0.98
SRP54-208ENST00000555557 CDK5R1Q15078 307 aa8.92□□□□□ -0.98
SRP54-208ENST00000555557 TAF13Q15543 124 aa8.92□□□□□ -0.98
SRP54-208ENST00000555557 STK11Q15831 433 aa8.92□□□□□ -0.98
SRP54-208ENST00000555557 HIST2H3PS2Q5TEC6 136 aa8.92□□□□□ -0.98
SRP54-208ENST00000555557 DMKNQ6E0U4 476 aaPredicted RBP8.92□□□□□ -0.98
SRP54-208ENST00000555557 HIST2H3AQ71DI3 136 aa8.92□□□□□ -0.98
SRP54-208ENST00000555557 ZNF627Q7L945 461 aa8.92□□□□□ -0.98
SRP54-208ENST00000555557 NAA40Q86UY6 237 aa8.92□□□□□ -0.98
SRP54-208ENST00000555557 P2RY8Q86VZ1 359 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms