RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 ICMTO60725 284 aa11.68□□□□□ -0.54
SNX6-203ENST00000555416 COX5BP10606 129 aa11.68□□□□□ -0.54
SNX6-203ENST00000555416 SLC25A16P16260 332 aa11.68□□□□□ -0.54
SNX6-203ENST00000555416 COL8A2P25067 703 aa11.68□□□□□ -0.54
SNX6-203ENST00000555416 GGT2P36268 569 aa11.68□□□□□ -0.54
SNX6-203ENST00000555416 NR4A2P43354 598 aa11.68□□□□□ -0.54
SNX6-203ENST00000555416 CBX1P83916 185 aa11.68□□□□□ -0.54
SNX6-203ENST00000555416 TEKQ02763 1124 aa11.68□□□□□ -0.54
SNX6-203ENST00000555416 LOXL1Q08397 574 aaPredicted RBP11.68□□□□□ -0.54
SNX6-203ENST00000555416 SCRN3Q0VDG4 424 aa11.68□□□□□ -0.54
SNX6-203ENST00000555416 HNRNPA0Q13151 305 aaKnown RBP11.68□□□□□ -0.54
SNX6-203ENST00000555416 CRMP1Q14194 572 aa11.68□□□□□ -0.54
SNX6-203ENST00000555416 TMEM249Q2WGJ8 235 aa11.68□□□□□ -0.54
SNX6-203ENST00000555416 SLC36A3Q495N2 470 aa11.68□□□□□ -0.54
SNX6-203ENST00000555416 CD300LDQ6UXZ3 194 aa11.68□□□□□ -0.54
SNX6-203ENST00000555416 CFAP77Q6ZQR2 320 aa11.68□□□□□ -0.54
SNX6-203ENST00000555416 SLC37A3Q8NCC5 494 aa11.68□□□□□ -0.54
SNX6-203ENST00000555416 OR51L1Q8NGJ5 315 aa11.68□□□□□ -0.54
SNX6-203ENST00000555416 KLF14Q8TD94 323 aaPredicted RBP11.68□□□□□ -0.54
SNX6-203ENST00000555416 UBASH3BQ8TF42 649 aa11.68□□□□□ -0.54
SNX6-203ENST00000555416 POP5Q969H6 163 aaKnown RBP11.68□□□□□ -0.54
SNX6-203ENST00000555416 YIPF5Q969M3 257 aa11.68□□□□□ -0.54
SNX6-203ENST00000555416 BPESC1Q9GZL8 116 aa11.68□□□□□ -0.54
SNX6-203ENST00000555416 PDP1Q9P0J1 537 aaPredicted RBP11.68□□□□□ -0.54
SNX6-203ENST00000555416 EIF3KQ9UBQ5 218 aaKnown RBP11.68□□□□□ -0.54
SNX6-203ENST00000555416 ABCA2Q9BZC7 2435 aa11.67□□□□□ -0.54
SNX6-203ENST00000555416 LOC390937A0A1W2PQ73 354 aa11.67□□□□□ -0.54
SNX6-203ENST00000555416 TVP23AA6NH52 213 aa11.67□□□□□ -0.54
SNX6-203ENST00000555416 TIPRLO75663 272 aa11.67□□□□□ -0.54
SNX6-203ENST00000555416 IGHV3-13P01766 116 aa11.67□□□□□ -0.54
SNX6-203ENST00000555416 GYPBP06028 91 aa11.67□□□□□ -0.54
SNX6-203ENST00000555416 CSF3P09919 207 aa11.67□□□□□ -0.54
SNX6-203ENST00000555416 CLUP10909 449 aa11.67□□□□□ -0.54
SNX6-203ENST00000555416 USF1P22415 310 aaPredicted RBP11.67□□□□□ -0.54
SNX6-203ENST00000555416 ANOS1P23352 680 aa11.67□□□□□ -0.54
SNX6-203ENST00000555416 RBMXP38159 391 aaKnown RBP11.67□□□□□ -0.54
SNX6-203ENST00000555416 RPS27P42677 84 aaKnown RBP11.67□□□□□ -0.54
SNX6-203ENST00000555416 RIN1Q13671 783 aa11.67□□□□□ -0.54
SNX6-203ENST00000555416 GGTLC2Q14390 218 aa11.67□□□□□ -0.54
SNX6-203ENST00000555416 NKPD1Q17RQ9 610 aa11.67□□□□□ -0.54
SNX6-203ENST00000555416 SPRNQ5BIV9 151 aa11.67□□□□□ -0.54
SNX6-203ENST00000555416 SLC18B1Q6NT16 456 aa11.67□□□□□ -0.54
SNX6-203ENST00000555416 RPL13AP3Q6NVV1 102 aa11.67□□□□□ -0.54
SNX6-203ENST00000555416 DNM1P34Q6PK57 102 aa11.67□□□□□ -0.54
SNX6-203ENST00000555416 ZNF786Q8N393 782 aa11.67□□□□□ -0.54
SNX6-203ENST00000555416 OR1F12Q8NHA8 337 aa11.67□□□□□ -0.54
SNX6-203ENST00000555416 SOX7Q9BT81 388 aa11.67□□□□□ -0.54
SNX6-203ENST00000555416 WACQ9BTA9 647 aa11.67□□□□□ -0.54
SNX6-203ENST00000555416 RBM4Q9BWF3 364 aaKnown RBP11.67□□□□□ -0.54
SNX6-203ENST00000555416 HCAR1Q9BXC0 346 aa11.67□□□□□ -0.54
SNX6-203ENST00000555416 NMNAT2Q9BZQ4 307 aa11.67□□□□□ -0.54
SNX6-203ENST00000555416 MS4A5Q9H3V2 200 aa11.67□□□□□ -0.54
SNX6-203ENST00000555416 MED20Q9H944 212 aa11.67□□□□□ -0.54
SNX6-203ENST00000555416 HINT3Q9NQE9 182 aaKnown RBP11.67□□□□□ -0.54
SNX6-203ENST00000555416 FBXO9Q9UK97 447 aaPredicted RBP11.67□□□□□ -0.54
SNX6-203ENST00000555416 POLR1DQ9Y2S0 133 aa11.67□□□□□ -0.54
SNX6-203ENST00000555416 STARD10Q9Y365 291 aa11.67□□□□□ -0.54
SNX6-203ENST00000555416 GRIP1Q9Y3R0 1128 aa11.67□□□□□ -0.54
SNX6-203ENST00000555416 ARRDC5A6NEK1 342 aa11.66□□□□□ -0.54
SNX6-203ENST00000555416 ZSCAN5BA6NJL1 495 aa11.66□□□□□ -0.54
SNX6-203ENST00000555416 C17orf100A8MU93 164 aa11.66□□□□□ -0.54
SNX6-203ENST00000555416 GNGT2O14610 69 aa11.66□□□□□ -0.54
SNX6-203ENST00000555416 ABHD16AO95870 558 aa11.66□□□□□ -0.54
SNX6-203ENST00000555416 IGHV4-31P0DP07 118 aa11.66□□□□□ -0.54
SNX6-203ENST00000555416 GSTM3P21266 225 aa11.66□□□□□ -0.54
SNX6-203ENST00000555416 GIFP27352 417 aa11.66□□□□□ -0.54
SNX6-203ENST00000555416 MMP15P51511 669 aa11.66□□□□□ -0.54
SNX6-203ENST00000555416 CCL8P80075 99 aa11.66□□□□□ -0.54
SNX6-203ENST00000555416 COX10Q12887 443 aa11.66□□□□□ -0.54
SNX6-203ENST00000555416 CCNIQ14094 377 aa11.66□□□□□ -0.54
SNX6-203ENST00000555416 TRIP10Q15642 601 aa11.66□□□□□ -0.54
SNX6-203ENST00000555416 ZNF718Q3SXZ3 478 aa11.66□□□□□ -0.54
SNX6-203ENST00000555416 MBNL2Q5VZF2 373 aaKnown RBP11.66□□□□□ -0.54
SNX6-203ENST00000555416 ACSM5Q6NUN0 579 aa11.66□□□□□ -0.54
SNX6-203ENST00000555416 TMEM154Q6P9G4 183 aa11.66□□□□□ -0.54
SNX6-203ENST00000555416 ZNF511Q8NB15 262 aa11.66□□□□□ -0.54
SNX6-203ENST00000555416 OR2T33Q8NG76 320 aa11.66□□□□□ -0.54
SNX6-203ENST00000555416 OR10S1Q8NGN2 331 aa11.66□□□□□ -0.54
SNX6-203ENST00000555416 UTP4Q969X6 686 aaKnown RBP11.66□□□□□ -0.54
SNX6-203ENST00000555416 MAP6Q96JE9 813 aa11.66□□□□□ -0.54
SNX6-203ENST00000555416 PIMREGQ9BSJ6 248 aa11.66□□□□□ -0.54
SNX6-203ENST00000555416 WDR76Q9H967 626 aa11.66□□□□□ -0.54
SNX6-203ENST00000555416 PNRC2Q9NPJ4 139 aaKnown RBP11.66□□□□□ -0.54
SNX6-203ENST00000555416 DNAJB9Q9UBS3 223 aa11.66□□□□□ -0.54
SNX6-203ENST00000555416 CYB5R1Q9UHQ9 305 aa11.66□□□□□ -0.54
SNX6-203ENST00000555416 NDRG4Q9ULP0 352 aaKnown RBP11.66□□□□□ -0.54
SNX6-203ENST00000555416 LRP5LA4QPB2 252 aa11.65□□□□□ -0.54
SNX6-203ENST00000555416 FAM183AA6NL82 134 aa11.65□□□□□ -0.54
SNX6-203ENST00000555416 NDUFS8O00217 210 aa11.65□□□□□ -0.54
SNX6-203ENST00000555416 WNT9BO14905 357 aa11.65□□□□□ -0.54
SNX6-203ENST00000555416 CD5LO43866 347 aa11.65□□□□□ -0.54
SNX6-203ENST00000555416 RP2O75695 350 aa11.65□□□□□ -0.54
SNX6-203ENST00000555416 HLA-DQA2P01906 255 aa11.65□□□□□ -0.54
SNX6-203ENST00000555416 ERCC1P07992 297 aaPredicted RBP11.65□□□□□ -0.54
SNX6-203ENST00000555416 IL2RGP31785 369 aa11.65□□□□□ -0.54
SNX6-203ENST00000555416 SELENOVP59797 346 aa11.65□□□□□ -0.54
SNX6-203ENST00000555416 PSG7Q13046 419 aa11.65□□□□□ -0.54
SNX6-203ENST00000555416 KRTAP27-1Q3LI81 207 aa11.65□□□□□ -0.54
SNX6-203ENST00000555416 NAA40Q86UY6 237 aa11.65□□□□□ -0.54
SNX6-203ENST00000555416 PROKR2Q8NFJ6 384 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms