RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 OR1F12Q8NHA8 337 aa10.4□□□□□ -0.74
SRP54-206ENST00000555317 OR5K1Q8NHB7 308 aa10.4□□□□□ -0.74
SRP54-206ENST00000555317 C4orf45Q96LM5 186 aa10.4□□□□□ -0.74
SRP54-206ENST00000555317 COG8Q96MW5 612 aa10.4□□□□□ -0.74
SRP54-206ENST00000555317 PITX2Q99697 317 aa10.4□□□□□ -0.74
SRP54-206ENST00000555317 PIMREGQ9BSJ6 248 aa10.4□□□□□ -0.74
SRP54-206ENST00000555317 REG4Q9BYZ8 158 aa10.4□□□□□ -0.74
SRP54-206ENST00000555317 HDHD2Q9H0R4 259 aa10.4□□□□□ -0.74
SRP54-206ENST00000555317 TPK1Q9H3S4 243 aa10.4□□□□□ -0.74
SRP54-206ENST00000555317 PAPOLBQ9NRJ5 636 aaKnown RBP10.4□□□□□ -0.74
SRP54-206ENST00000555317 TAAR3PQ9P1P4 343 aa10.4□□□□□ -0.74
SRP54-206ENST00000555317 ATPIF1Q9UII2 106 aa10.4□□□□□ -0.74
SRP54-206ENST00000555317 KCNG2Q9UJ96 466 aa10.4□□□□□ -0.74
SRP54-206ENST00000555317 GRIP1Q9Y3R0 1128 aa10.4□□□□□ -0.74
SRP54-206ENST00000555317 ABCA1O95477 2261 aa10.4□□□□□ -0.75
SRP54-206ENST00000555317 TMEM129A0AVI4 362 aa10.39□□□□□ -0.75
SRP54-206ENST00000555317 PLSCR5A0PG75 271 aa10.39□□□□□ -0.75
SRP54-206ENST00000555317 H3BSA7 217 aa10.39□□□□□ -0.75
SRP54-206ENST00000555317 RER1O15258 196 aa10.39□□□□□ -0.75
SRP54-206ENST00000555317 LY6HO94772 140 aa10.39□□□□□ -0.75
SRP54-206ENST00000555317 TP53P04637 393 aaPredicted RBP10.39□□□□□ -0.75
SRP54-206ENST00000555317 HMGN1P05114 100 aa10.39□□□□□ -0.75
SRP54-206ENST00000555317 OSMP13725 252 aa10.39□□□□□ -0.75
SRP54-206ENST00000555317 ZNF250P15622 560 aa10.39□□□□□ -0.75
SRP54-206ENST00000555317 ZNF23P17027 643 aa10.39□□□□□ -0.75
SRP54-206ENST00000555317 PRKACGP22612 351 aa10.39□□□□□ -0.75
SRP54-206ENST00000555317 FMO3P31513 532 aa10.39□□□□□ -0.75
SRP54-206ENST00000555317 WNT5AP41221 380 aa10.39□□□□□ -0.75
SRP54-206ENST00000555317 BLVRAP53004 296 aa10.39□□□□□ -0.75
SRP54-206ENST00000555317 SLC25A1P53007 311 aa10.39□□□□□ -0.75
SRP54-206ENST00000555317 ERVS71-1P61550 626 aa10.39□□□□□ -0.75
SRP54-206ENST00000555317 PPP1CBP62140 327 aa10.39□□□□□ -0.75
SRP54-206ENST00000555317 ECH1Q13011 328 aa10.39□□□□□ -0.75
SRP54-206ENST00000555317 CCNIQ14094 377 aa10.39□□□□□ -0.75
SRP54-206ENST00000555317 CRMP1Q14194 572 aa10.39□□□□□ -0.75
SRP54-206ENST00000555317 MAD2L1BPQ15013 274 aaPredicted RBP10.39□□□□□ -0.75
SRP54-206ENST00000555317 ALKBH6Q3KRA9 238 aa10.39□□□□□ -0.75
SRP54-206ENST00000555317 ELFN2Q5R3F8 820 aa10.39□□□□□ -0.75
SRP54-206ENST00000555317 CORO6Q6QEF8 472 aa10.39□□□□□ -0.75
SRP54-206ENST00000555317 RFPL4BQ6ZWI9 263 aa10.39□□□□□ -0.75
SRP54-206ENST00000555317 ASRGL1Q7L266 308 aa10.39□□□□□ -0.75
SRP54-206ENST00000555317 LRP11Q86VZ4 500 aa10.39□□□□□ -0.75
SRP54-206ENST00000555317 HIPK1Q86Z02 1210 aa10.39□□□□□ -0.75
SRP54-206ENST00000555317 LINC00346Q8IVM7 164 aa10.39□□□□□ -0.75
SRP54-206ENST00000555317 C10orf67Q8IYJ2 551 aa10.39□□□□□ -0.75
SRP54-206ENST00000555317 ZNF101Q8IZC7 436 aa10.39□□□□□ -0.75
SRP54-206ENST00000555317 HS3ST5Q8IZT8 346 aa10.39□□□□□ -0.75
SRP54-206ENST00000555317 CIARTQ8N365 385 aaPredicted RBP10.39□□□□□ -0.75
SRP54-206ENST00000555317 OR51L1Q8NGJ5 315 aa10.39□□□□□ -0.75
SRP54-206ENST00000555317 IPCEF1Q8WWN9 437 aaPredicted RBP10.39□□□□□ -0.75
SRP54-206ENST00000555317 DCLRE1CQ96SD1 692 aaKnown RBP10.39□□□□□ -0.75
SRP54-206ENST00000555317 CMC2Q9NRP2 79 aa10.39□□□□□ -0.75
SRP54-206ENST00000555317 LHFPL6Q9Y693 200 aa10.39□□□□□ -0.75
SRP54-206ENST00000555317 CHD3Q12873 2000 aaKnown RBP10.39□□□□□ -0.75
SRP54-206ENST00000555317 NF1P21359 2839 aa10.38□□□□□ -0.75
SRP54-206ENST00000555317 IGHV4-30-2A0A087WSY4 118 aa10.38□□□□□ -0.75
SRP54-206ENST00000555317 LOC390937A0A1W2PQ73 354 aa10.38□□□□□ -0.75
SRP54-206ENST00000555317 TVP23AA6NH52 213 aa10.38□□□□□ -0.75
SRP54-206ENST00000555317 G3V2T6 193 aa10.38□□□□□ -0.75
SRP54-206ENST00000555317 NDUFS8O00217 210 aa10.38□□□□□ -0.75
SRP54-206ENST00000555317 TPD52L2O43399 206 aaKnown RBP10.38□□□□□ -0.75
SRP54-206ENST00000555317 CLPTM1O96005 669 aa10.38□□□□□ -0.75
SRP54-206ENST00000555317 TFP02787 698 aa10.38□□□□□ -0.75
SRP54-206ENST00000555317 NAT2P11245 290 aa10.38□□□□□ -0.75
SRP54-206ENST00000555317 DAOP14920 347 aa10.38□□□□□ -0.75
SRP54-206ENST00000555317 SPI1P17947 270 aa10.38□□□□□ -0.75
SRP54-206ENST00000555317 TUBG1P23258 451 aa10.38□□□□□ -0.75
SRP54-206ENST00000555317 RGS6P49758 472 aa10.38□□□□□ -0.75
SRP54-206ENST00000555317 GINS1Q14691 196 aa10.38□□□□□ -0.75
SRP54-206ENST00000555317 MSMPQ1L6U9 139 aa10.38□□□□□ -0.75
SRP54-206ENST00000555317 CCDC92Q53HC0 331 aaPredicted RBP10.38□□□□□ -0.75
SRP54-206ENST00000555317 ZMAT1Q5H9K5 638 aa10.38□□□□□ -0.75
SRP54-206ENST00000555317 SLC18B1Q6NT16 456 aa10.38□□□□□ -0.75
SRP54-206ENST00000555317 ZDHHC13Q8IUH4 622 aa10.38□□□□□ -0.75
SRP54-206ENST00000555317 ZCCHC24Q8N2G6 241 aaKnown RBP10.38□□□□□ -0.75
SRP54-206ENST00000555317 ZNF540Q8NDQ6 660 aa10.38□□□□□ -0.75
SRP54-206ENST00000555317 OR5L1Q8NGL2 311 aa10.38□□□□□ -0.75
SRP54-206ENST00000555317 SLC25A40Q8TBP6 338 aa10.38□□□□□ -0.75
SRP54-206ENST00000555317 C10orf105Q8TEF2 133 aa10.38□□□□□ -0.75
SRP54-206ENST00000555317 UTP4Q969X6 686 aaKnown RBP10.38□□□□□ -0.75
SRP54-206ENST00000555317 RAB3IPQ96QF0 476 aaPredicted RBP10.38□□□□□ -0.75
SRP54-206ENST00000555317 COQ7Q99807 217 aa10.38□□□□□ -0.75
SRP54-206ENST00000555317 RBM4Q9BWF3 364 aaKnown RBP10.38□□□□□ -0.75
SRP54-206ENST00000555317 PRRG3Q9BZD7 231 aa10.38□□□□□ -0.75
SRP54-206ENST00000555317 OR2J1Q9GZK6 312 aa10.38□□□□□ -0.75
SRP54-206ENST00000555317 HINT3Q9NQE9 182 aaKnown RBP10.38□□□□□ -0.75
SRP54-206ENST00000555317 TUBG2Q9NRH3 451 aa10.38□□□□□ -0.75
SRP54-206ENST00000555317 KRT84Q9NSB2 600 aa10.38□□□□□ -0.75
SRP54-206ENST00000555317 TBCCD1Q9NVR7 557 aa10.38□□□□□ -0.75
SRP54-206ENST00000555317 MYEF2Q9P2K5 600 aaKnown RBP10.38□□□□□ -0.75
SRP54-206ENST00000555317 ENOPH1Q9UHY7 261 aa10.38□□□□□ -0.75
SRP54-206ENST00000555317 ZFHX3Q15911 3703 aa10.38□□□□□ -0.75
SRP54-206ENST00000555317 SONP18583 2426 aaKnown RBP10.37□□□□□ -0.75
SRP54-206ENST00000555317 IGLV3-9A0A075B6K5 115 aa10.37□□□□□ -0.75
SRP54-206ENST00000555317 PRR23D1E9PI22 279 aaPredicted RBP10.37□□□□□ -0.75
SRP54-206ENST00000555317 J3QW42 95 aa10.37□□□□□ -0.75
SRP54-206ENST00000555317 TIMM8AO60220 97 aaPredicted RBP10.37□□□□□ -0.75
SRP54-206ENST00000555317 ICMTO60725 284 aa10.37□□□□□ -0.75
SRP54-206ENST00000555317 GYPBP06028 91 aa10.37□□□□□ -0.75
SRP54-206ENST00000555317 SPARCP09486 303 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms