RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 HRASLS2Q9NWW9 162 aa3.47□□□□□ -1.85
CKS1BP1-201ENST00000555221 LGALS13Q9UHV8 139 aa3.47□□□□□ -1.85
CKS1BP1-201ENST00000555221 ZNF223Q9UK11 482 aaPredicted RBP3.47□□□□□ -1.85
CKS1BP1-201ENST00000555221 NWD1Q149M9 1564 aa3.46□□□□□ -1.85
CKS1BP1-201ENST00000555221 IGLV3-16A0A075B6K0 115 aa3.46□□□□□ -1.86
CKS1BP1-201ENST00000555221 A0A096LNJ9 63 aa3.46□□□□□ -1.86
CKS1BP1-201ENST00000555221 TRBV9A0A0B4J1U6 114 aa3.46□□□□□ -1.86
CKS1BP1-201ENST00000555221 LYRM9A8MSI8 78 aa3.46□□□□□ -1.86
CKS1BP1-201ENST00000555221 KRTAP9-6A8MVA2 160 aa3.46□□□□□ -1.86
CKS1BP1-201ENST00000555221 CD5LO43866 347 aa3.46□□□□□ -1.86
CKS1BP1-201ENST00000555221 CHST1O43916 411 aa3.46□□□□□ -1.86
CKS1BP1-201ENST00000555221 KLHL41O60662 606 aa3.46□□□□□ -1.86
CKS1BP1-201ENST00000555221 SRP72O76094 671 aaKnown RBP3.46□□□□□ -1.86
CKS1BP1-201ENST00000555221 RETP07949 1114 aa3.46□□□□□ -1.86
CKS1BP1-201ENST00000555221 HOXC4P09017 264 aaPredicted RBP3.46□□□□□ -1.86
CKS1BP1-201ENST00000555221 LONP1P36776 959 aaKnown RBP3.46□□□□□ -1.86
CKS1BP1-201ENST00000555221 C1QTNF8P60827 252 aa3.46□□□□□ -1.86
CKS1BP1-201ENST00000555221 SLC25A11Q02978 314 aaKnown RBP3.46□□□□□ -1.86
CKS1BP1-201ENST00000555221 KCTD19Q17RG1 926 aaPredicted RBP3.46□□□□□ -1.86
CKS1BP1-201ENST00000555221 ALKBH6Q3KRA9 238 aa3.46□□□□□ -1.86
CKS1BP1-201ENST00000555221 HES5Q5TA89 166 aa3.46□□□□□ -1.86
CKS1BP1-201ENST00000555221 EIF3MQ7L2H7 374 aaKnown RBP3.46□□□□□ -1.86
CKS1BP1-201ENST00000555221 CCDC148Q8NFR7 591 aa3.46□□□□□ -1.86
CKS1BP1-201ENST00000555221 OR5B3Q8NH48 314 aa3.46□□□□□ -1.86
CKS1BP1-201ENST00000555221 CREB3L1Q96BA8 519 aa3.46□□□□□ -1.86
CKS1BP1-201ENST00000555221 ZNF414Q96IQ9 312 aa3.46□□□□□ -1.86
CKS1BP1-201ENST00000555221 BMFQ96LC9 184 aa3.46□□□□□ -1.86
CKS1BP1-201ENST00000555221 WFIKKN1Q96NZ8 548 aa3.46□□□□□ -1.86
CKS1BP1-201ENST00000555221 TMEM165Q9HC07 324 aa3.46□□□□□ -1.86
CKS1BP1-201ENST00000555221 LHX9Q9NQ69 397 aa3.46□□□□□ -1.86
CKS1BP1-201ENST00000555221 LYARQ9NX58 379 aaKnown RBP3.46□□□□□ -1.86
CKS1BP1-201ENST00000555221 GCNT4Q9P109 453 aa3.46□□□□□ -1.86
CKS1BP1-201ENST00000555221 OR12D3Q9UGF7 316 aa3.46□□□□□ -1.86
CKS1BP1-201ENST00000555221 POLR3AO14802 1390 aaPredicted RBP3.46□□□□□ -1.86
CKS1BP1-201ENST00000555221 UTRNP46939 3433 aa3.45□□□□□ -1.86
CKS1BP1-201ENST00000555221 IGLV4-69A0A075B6H9 119 aa3.45□□□□□ -1.86
CKS1BP1-201ENST00000555221 C11orf94C9JXX5 98 aa3.45□□□□□ -1.86
CKS1BP1-201ENST00000555221 H0YHG0 523 aa3.45□□□□□ -1.86
CKS1BP1-201ENST00000555221 FABP3P05413 133 aa3.45□□□□□ -1.86
CKS1BP1-201ENST00000555221 GNAO1P09471 354 aa3.45□□□□□ -1.86
CKS1BP1-201ENST00000555221 ACSM4P0C7M7 580 aa3.45□□□□□ -1.86
CKS1BP1-201ENST00000555221 MYL2P10916 166 aa3.45□□□□□ -1.86
CKS1BP1-201ENST00000555221 CCNB1P14635 433 aa3.45□□□□□ -1.86
CKS1BP1-201ENST00000555221 F2RP25116 425 aa3.45□□□□□ -1.86
CKS1BP1-201ENST00000555221 GTF2E2P29084 291 aaKnown RBP3.45□□□□□ -1.86
CKS1BP1-201ENST00000555221 KRTAP12-2P59991 146 aa3.45□□□□□ -1.86
CKS1BP1-201ENST00000555221 POU2AF1Q16633 256 aa3.45□□□□□ -1.86
CKS1BP1-201ENST00000555221 ZSCAN26Q16670 478 aa3.45□□□□□ -1.86
CKS1BP1-201ENST00000555221 TTC23LQ6PF05 361 aa3.45□□□□□ -1.86
CKS1BP1-201ENST00000555221 SSX9Q7RTT3 188 aa3.45□□□□□ -1.86
CKS1BP1-201ENST00000555221 TMEM150AQ86TG1 271 aa3.45□□□□□ -1.86
CKS1BP1-201ENST00000555221 BIVMQ86UB2 503 aa3.45□□□□□ -1.86
CKS1BP1-201ENST00000555221 MMAAQ8IVH4 418 aaKnown RBP3.45□□□□□ -1.86
CKS1BP1-201ENST00000555221 C12orf56Q8IXR9 622 aa3.45□□□□□ -1.86
CKS1BP1-201ENST00000555221 PRELID2Q8N945 189 aa3.45□□□□□ -1.86
CKS1BP1-201ENST00000555221 Q8N976 141 aa3.45□□□□□ -1.86
CKS1BP1-201ENST00000555221 OR2A1Q8NGT9 310 aa3.45□□□□□ -1.86
CKS1BP1-201ENST00000555221 ZNF596Q8TC21 504 aa3.45□□□□□ -1.86
CKS1BP1-201ENST00000555221 ZFP90Q8TF47 636 aa3.45□□□□□ -1.86
CKS1BP1-201ENST00000555221 DNAJC1Q96KC8 554 aaKnown RBP3.45□□□□□ -1.86
CKS1BP1-201ENST00000555221 ZNF285Q96NJ3 590 aa3.45□□□□□ -1.86
CKS1BP1-201ENST00000555221 GSDMAQ96QA5 445 aa3.45□□□□□ -1.86
CKS1BP1-201ENST00000555221 PANX1Q96RD7 426 aa3.45□□□□□ -1.86
CKS1BP1-201ENST00000555221 C11orf70Q9BRQ4 267 aa3.45□□□□□ -1.86
CKS1BP1-201ENST00000555221 MTG1Q9BT17 334 aaPredicted RBP3.45□□□□□ -1.86
CKS1BP1-201ENST00000555221 TPK1Q9H3S4 243 aa3.45□□□□□ -1.86
CKS1BP1-201ENST00000555221 ISYNA1Q9NPH2 558 aa3.45□□□□□ -1.86
CKS1BP1-201ENST00000555221 CCDC59Q9P031 241 aaKnown RBP3.45□□□□□ -1.86
CKS1BP1-201ENST00000555221 KLK12Q9UKR0 248 aa3.45□□□□□ -1.86
CKS1BP1-201ENST00000555221 TMED5Q9Y3A6 229 aa3.45□□□□□ -1.86
CKS1BP1-201ENST00000555221 MRPS18BQ9Y676 258 aaKnown RBP3.45□□□□□ -1.86
CKS1BP1-201ENST00000555221 KTN1Q86UP2 1357 aaKnown RBP3.45□□□□□ -1.86
CKS1BP1-201ENST00000555221 PPIP5K1Q6PFW1 1433 aa3.44□□□□□ -1.86
CKS1BP1-201ENST00000555221 MTCL1Q9Y4B5 1905 aaKnown RBP3.44□□□□□ -1.86
CKS1BP1-201ENST00000555221 ARHGAP21Q5T5U3 1957 aa3.44□□□□□ -1.86
CKS1BP1-201ENST00000555221 PPLO60437 1756 aa3.44□□□□□ -1.86
CKS1BP1-201ENST00000555221 RALGAPBQ86X10 1494 aa3.44□□□□□ -1.86
CKS1BP1-201ENST00000555221 KIF24Q5T7B8 1368 aa3.44□□□□□ -1.86
CKS1BP1-201ENST00000555221 IGHV3-66A0A0C4DH42 116 aa3.44□□□□□ -1.86
CKS1BP1-201ENST00000555221 SPECC1L-ADORA2AF8WAN1 911 aa3.44□□□□□ -1.86
CKS1BP1-201ENST00000555221 INS-IGF2F8WCM5 200 aa3.44□□□□□ -1.86
CKS1BP1-201ENST00000555221 WRBO00258 174 aa3.44□□□□□ -1.86
CKS1BP1-201ENST00000555221 EIF3HO15372 352 aaKnown RBP eCLIP3.44□□□□□ -1.86
CKS1BP1-201ENST00000555221 HUS1O60921 280 aa3.44□□□□□ -1.86
CKS1BP1-201ENST00000555221 SPAG7O75391 227 aa3.44□□□□□ -1.86
CKS1BP1-201ENST00000555221 RAB3BP20337 219 aa3.44□□□□□ -1.86
CKS1BP1-201ENST00000555221 DCKP27707 260 aa3.44□□□□□ -1.86
CKS1BP1-201ENST00000555221 CDKN2BP42772 138 aa3.44□□□□□ -1.86
CKS1BP1-201ENST00000555221 MRPL19P49406 292 aaKnown RBP3.44□□□□□ -1.86
CKS1BP1-201ENST00000555221 MXD1Q05195 221 aa3.44□□□□□ -1.86
CKS1BP1-201ENST00000555221 LIPEQ05469 1076 aa3.44□□□□□ -1.86
CKS1BP1-201ENST00000555221 SELENBP1Q13228 472 aa3.44□□□□□ -1.86
CKS1BP1-201ENST00000555221 GINS1Q14691 196 aa3.44□□□□□ -1.86
CKS1BP1-201ENST00000555221 OR7A5Q15622 319 aa3.44□□□□□ -1.86
CKS1BP1-201ENST00000555221 PGGHGQ32M88 737 aa3.44□□□□□ -1.86
CKS1BP1-201ENST00000555221 SOHLH1Q5JUK2 328 aa3.44□□□□□ -1.86
CKS1BP1-201ENST00000555221 SPECC1LQ69YQ0 1117 aa3.44□□□□□ -1.86
CKS1BP1-201ENST00000555221 Q6ZVH6 145 aa3.44□□□□□ -1.86
CKS1BP1-201ENST00000555221 CMTM1Q8IZ96 169 aa3.44□□□□□ -1.86
CKS1BP1-201ENST00000555221 DUS3LQ96G46 650 aaKnown RBP3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms