RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 NAAAQ02083 359 aa3.58□□□□□ -1.84
VTI1B-203ENST00000554636 POU3F1Q03052 451 aaPredicted RBP3.58□□□□□ -1.84
VTI1B-203ENST00000554636 TGFBR3Q03167 851 aa3.58□□□□□ -1.84
VTI1B-203ENST00000554636 TNK1Q13470 666 aa3.58□□□□□ -1.84
VTI1B-203ENST00000554636 C1DQ13901 141 aaKnown RBP3.58□□□□□ -1.84
VTI1B-203ENST00000554636 CYLC2Q14093 348 aaPredicted RBP3.58□□□□□ -1.84
VTI1B-203ENST00000554636 VEZF1Q14119 521 aa3.58□□□□□ -1.84
VTI1B-203ENST00000554636 MAPRE2Q15555 327 aa3.58□□□□□ -1.84
VTI1B-203ENST00000554636 CEACAM16Q2WEN9 425 aa3.58□□□□□ -1.84
VTI1B-203ENST00000554636 MS4A18Q3C1V0 323 aa3.58□□□□□ -1.84
VTI1B-203ENST00000554636 CYBRD1Q53TN4 286 aa3.58□□□□□ -1.84
VTI1B-203ENST00000554636 PIK3CD-AS1Q5SR53 167 aa3.58□□□□□ -1.84
VTI1B-203ENST00000554636 INTS11Q5TA45 600 aaKnown RBP3.58□□□□□ -1.84
VTI1B-203ENST00000554636 AGAP6Q5VW22 663 aa3.58□□□□□ -1.84
VTI1B-203ENST00000554636 ZNF544Q6NX49 715 aa3.58□□□□□ -1.84
VTI1B-203ENST00000554636 C8orf82Q6P1X6 216 aaPredicted RBP3.58□□□□□ -1.84
VTI1B-203ENST00000554636 ERICH5Q6P6B1 374 aa3.58□□□□□ -1.84
VTI1B-203ENST00000554636 SLC22A25Q6T423 547 aa3.58□□□□□ -1.84
VTI1B-203ENST00000554636 KLHL24Q6TFL4 600 aa3.58□□□□□ -1.84
VTI1B-203ENST00000554636 Q71RC1 249 aaPredicted RBP3.58□□□□□ -1.84
VTI1B-203ENST00000554636 H1FNTQ75WM6 255 aaPredicted RBP3.58□□□□□ -1.84
VTI1B-203ENST00000554636 MYPOPQ86VE0 399 aaPredicted RBP3.58□□□□□ -1.84
VTI1B-203ENST00000554636 CARM1Q86X55 608 aa3.58□□□□□ -1.84
VTI1B-203ENST00000554636 C20orf196Q8IYI0 205 aa3.58□□□□□ -1.84
VTI1B-203ENST00000554636 MUC15Q8N387 334 aa3.58□□□□□ -1.84
VTI1B-203ENST00000554636 OR5J2Q8NH18 312 aa3.58□□□□□ -1.84
VTI1B-203ENST00000554636 ADAMTS16Q8TE57 1224 aa3.58□□□□□ -1.84
VTI1B-203ENST00000554636 TMEM54Q969K7 222 aa3.58□□□□□ -1.84
VTI1B-203ENST00000554636 RCN3Q96D15 328 aa3.58□□□□□ -1.84
VTI1B-203ENST00000554636 TXNDC15Q96J42 360 aa3.58□□□□□ -1.84
VTI1B-203ENST00000554636 ZNF583Q96ND8 569 aa3.58□□□□□ -1.84
VTI1B-203ENST00000554636 SLC38A2Q96QD8 506 aa3.58□□□□□ -1.84
VTI1B-203ENST00000554636 EMC6Q9BV81 110 aa3.58□□□□□ -1.84
VTI1B-203ENST00000554636 KATNB1Q9BVA0 655 aa3.58□□□□□ -1.84
VTI1B-203ENST00000554636 CACNG6Q9BXT2 260 aa3.58□□□□□ -1.84
VTI1B-203ENST00000554636 KRTAP1-5Q9BYS1 174 aa3.58□□□□□ -1.84
VTI1B-203ENST00000554636 FKRPQ9H9S5 495 aa3.58□□□□□ -1.84
VTI1B-203ENST00000554636 NOX3Q9HBY0 568 aa3.58□□□□□ -1.84
VTI1B-203ENST00000554636 MED4Q9NPJ6 270 aa3.58□□□□□ -1.84
VTI1B-203ENST00000554636 CBLN4Q9NTU7 201 aa3.58□□□□□ -1.84
VTI1B-203ENST00000554636 MRGBPQ9NV56 204 aa3.58□□□□□ -1.84
VTI1B-203ENST00000554636 MED29Q9NX70 200 aa3.58□□□□□ -1.84
VTI1B-203ENST00000554636 CMTM6Q9NX76 183 aa3.58□□□□□ -1.84
VTI1B-203ENST00000554636 SELENONQ9NZV5 590 aa3.58□□□□□ -1.84
VTI1B-203ENST00000554636 ARMCX1Q9P291 453 aa3.58□□□□□ -1.84
VTI1B-203ENST00000554636 CAPN7Q9Y6W3 813 aa3.58□□□□□ -1.84
VTI1B-203ENST00000554636 CUBNO60494 3623 aa3.57□□□□□ -1.84
VTI1B-203ENST00000554636 IGHV4-30-2A0A087WSY4 118 aa3.57□□□□□ -1.84
VTI1B-203ENST00000554636 IGHV2OR16-5A0A0B4J2B6 119 aa3.57□□□□□ -1.84
VTI1B-203ENST00000554636 LOC100653049A0A140TA62 436 aa3.57□□□□□ -1.84
VTI1B-203ENST00000554636 ZNF99A8MXY4 864 aaPredicted RBP3.57□□□□□ -1.84
VTI1B-203ENST00000554636 C11orf98E9PRG8 122 aa3.57□□□□□ -1.84
VTI1B-203ENST00000554636 H7C417 338 aa3.57□□□□□ -1.84
VTI1B-203ENST00000554636 M0R3G1 203 aa3.57□□□□□ -1.84
VTI1B-203ENST00000554636 KPNA4O00629 521 aaPredicted RBP3.57□□□□□ -1.84
VTI1B-203ENST00000554636 PIP5K1CO60331 668 aa3.57□□□□□ -1.84
VTI1B-203ENST00000554636 SHOX2O60902 331 aaPredicted RBP3.57□□□□□ -1.84
VTI1B-203ENST00000554636 KRT33AO76009 404 aa3.57□□□□□ -1.84
VTI1B-203ENST00000554636 KRT34O76011 436 aa3.57□□□□□ -1.84
VTI1B-203ENST00000554636 OR7A10O76100 309 aa3.57□□□□□ -1.84
VTI1B-203ENST00000554636 OR5F1O95221 314 aa3.57□□□□□ -1.84
VTI1B-203ENST00000554636 CH25HO95992 272 aa3.57□□□□□ -1.84
VTI1B-203ENST00000554636 NPPAP01160 153 aa3.57□□□□□ -1.84
VTI1B-203ENST00000554636 IGF2P01344 180 aa3.57□□□□□ -1.84
VTI1B-203ENST00000554636 IGFBP1P08833 259 aaPredicted RBP3.57□□□□□ -1.84
VTI1B-203ENST00000554636 TSPAN19P0C672 248 aa3.57□□□□□ -1.84
VTI1B-203ENST00000554636 ASAH2BP0C7U1 165 aa3.57□□□□□ -1.84
VTI1B-203ENST00000554636 T-ENOLP0DO92 83 aa3.57□□□□□ -1.84
VTI1B-203ENST00000554636 THRBP10828 461 aa3.57□□□□□ -1.84
VTI1B-203ENST00000554636 COX4I1P13073 169 aa3.57□□□□□ -1.84
VTI1B-203ENST00000554636 NQO1P15559 274 aaKnown RBP3.57□□□□□ -1.84
VTI1B-203ENST00000554636 CBR1P16152 277 aa3.57□□□□□ -1.84
VTI1B-203ENST00000554636 PAX7P23759 505 aa3.57□□□□□ -1.84
VTI1B-203ENST00000554636 FABP6P51161 128 aa3.57□□□□□ -1.84
VTI1B-203ENST00000554636 IDH3GP51553 393 aaPredicted RBP3.57□□□□□ -1.84
VTI1B-203ENST00000554636 UBE2NP61088 152 aaKnown RBP3.57□□□□□ -1.84
VTI1B-203ENST00000554636 ARF1P84077 181 aaKnown RBP3.57□□□□□ -1.84
VTI1B-203ENST00000554636 PUDPQ08623 228 aa3.57□□□□□ -1.84
VTI1B-203ENST00000554636 ZP4Q12836 540 aa3.57□□□□□ -1.84
VTI1B-203ENST00000554636 PMS2P3Q13401 168 aa3.57□□□□□ -1.84
VTI1B-203ENST00000554636 CAMK2DQ13557 499 aa3.57□□□□□ -1.84
VTI1B-203ENST00000554636 MELKQ14680 651 aa3.57□□□□□ -1.84
VTI1B-203ENST00000554636 EFNB3Q15768 340 aa3.57□□□□□ -1.84
VTI1B-203ENST00000554636 CLEC12BQ2HXU8 276 aa3.57□□□□□ -1.84
VTI1B-203ENST00000554636 MMEL1Q495T6 779 aa3.57□□□□□ -1.84
VTI1B-203ENST00000554636 ZNF585BQ52M93 769 aa3.57□□□□□ -1.84
VTI1B-203ENST00000554636 LRRC23Q53EV4 343 aaPredicted RBP3.57□□□□□ -1.84
VTI1B-203ENST00000554636 MALRD1Q5VYJ5 2156 aa3.57□□□□□ -1.84
VTI1B-203ENST00000554636 CARD17Q5XLA6 110 aa3.57□□□□□ -1.84
VTI1B-203ENST00000554636 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.57□□□□□ -1.84
VTI1B-203ENST00000554636 TTC33Q6PID6 262 aaPredicted RBP3.57□□□□□ -1.84
VTI1B-203ENST00000554636 ARPINQ7Z6K5 226 aa3.57□□□□□ -1.84
VTI1B-203ENST00000554636 PXKQ7Z7A4 578 aa3.57□□□□□ -1.84
VTI1B-203ENST00000554636 MDP1Q86V88 176 aa3.57□□□□□ -1.84
VTI1B-203ENST00000554636 NKAIN4Q8IVV8 208 aa3.57□□□□□ -1.84
VTI1B-203ENST00000554636 MICU2Q8IYU8 434 aa3.57□□□□□ -1.84
VTI1B-203ENST00000554636 FBXL14Q8N1E6 418 aa3.57□□□□□ -1.84
VTI1B-203ENST00000554636 GPR137CQ8N3F9 429 aa3.57□□□□□ -1.84
VTI1B-203ENST00000554636 C10orf53Q8N6V4 93 aa3.57□□□□□ -1.84
VTI1B-203ENST00000554636 LRRC17Q8N6Y2 441 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms