RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 COQ7Q99807 217 aa12.69□□□□□ -0.38
SHMT2-210ENST00000553950 SH3GL3Q99963 347 aa12.69□□□□□ -0.38
SHMT2-210ENST00000553950 MOB1AQ9H8S9 216 aa12.69□□□□□ -0.38
SHMT2-210ENST00000553950 KCNJ16Q9NPI9 418 aa12.69□□□□□ -0.38
SHMT2-210ENST00000553950 TRIM36Q9NQ86 728 aa12.69□□□□□ -0.38
SHMT2-210ENST00000553950 COPS3Q9UNS2 423 aa12.69□□□□□ -0.38
SHMT2-210ENST00000553950 OR6C6A6NF89 314 aa12.68□□□□□ -0.38
SHMT2-210ENST00000553950 METTL15A6NJ78 407 aa12.68□□□□□ -0.38
SHMT2-210ENST00000553950 TRIM64CA6NLI5 447 aa12.68□□□□□ -0.38
SHMT2-210ENST00000553950 CLDN14O95500 239 aa12.68□□□□□ -0.38
SHMT2-210ENST00000553950 CLPTM1O96005 669 aa12.68□□□□□ -0.38
SHMT2-210ENST00000553950 HTR1AP08908 422 aa12.68□□□□□ -0.38
SHMT2-210ENST00000553950 MMP7P09237 267 aaPredicted RBP12.68□□□□□ -0.38
SHMT2-210ENST00000553950 H2BFMP0C1H6 154 aa12.68□□□□□ -0.38
SHMT2-210ENST00000553950 LIMS3P0CW19 117 aa12.68□□□□□ -0.38
SHMT2-210ENST00000553950 LIMS4P0CW20 117 aa12.68□□□□□ -0.38
SHMT2-210ENST00000553950 UGT2B10P36537 528 aa12.68□□□□□ -0.38
SHMT2-210ENST00000553950 ETV1P50549 477 aa12.68□□□□□ -0.38
SHMT2-210ENST00000553950 CDH15P55291 814 aa12.68□□□□□ -0.38
SHMT2-210ENST00000553950 FOXG1P55316 489 aaPredicted RBP12.68□□□□□ -0.38
SHMT2-210ENST00000553950 DBPQ10586 325 aaPredicted RBP12.68□□□□□ -0.38
SHMT2-210ENST00000553950 SPHARQ15513 63 aa12.68□□□□□ -0.38
SHMT2-210ENST00000553950 C3orf36Q3SXR2 165 aa12.68□□□□□ -0.38
SHMT2-210ENST00000553950 HIKESHIQ53FT3 197 aa12.68□□□□□ -0.38
SHMT2-210ENST00000553950 CORO6Q6QEF8 472 aa12.68□□□□□ -0.38
SHMT2-210ENST00000553950 CFAP77Q6ZQR2 320 aa12.68□□□□□ -0.38
SHMT2-210ENST00000553950 LIX1LQ8IVB5 337 aa12.68□□□□□ -0.38
SHMT2-210ENST00000553950 NANOGP1Q8N7R0 232 aa12.68□□□□□ -0.38
SHMT2-210ENST00000553950 RORBQ92753 470 aa12.68□□□□□ -0.38
SHMT2-210ENST00000553950 FBXO17Q96EF6 278 aa12.68□□□□□ -0.38
SHMT2-210ENST00000553950 OR2H1Q9GZK4 316 aa12.68□□□□□ -0.38
SHMT2-210ENST00000553950 ACTR6Q9GZN1 396 aa12.68□□□□□ -0.38
SHMT2-210ENST00000553950 SP140LQ9H930 580 aa12.68□□□□□ -0.38
SHMT2-210ENST00000553950 ACOT13Q9NPJ3 140 aa12.68□□□□□ -0.38
SHMT2-210ENST00000553950 GNG8Q9UK08 70 aa12.68□□□□□ -0.38
SHMT2-210ENST00000553950 SCG5P05408 212 aa12.67□□□□□ -0.38
SHMT2-210ENST00000553950 SMIM18P0DKX4 95 aa12.67□□□□□ -0.38
SHMT2-210ENST00000553950 ATP6V1B1P15313 513 aa12.67□□□□□ -0.38
SHMT2-210ENST00000553950 OPRL1P41146 370 aa12.67□□□□□ -0.38
SHMT2-210ENST00000553950 RPS27P42677 84 aaKnown RBP12.67□□□□□ -0.38
SHMT2-210ENST00000553950 HTR5AP47898 357 aa12.67□□□□□ -0.38
SHMT2-210ENST00000553950 GBX2P52951 348 aaPredicted RBP12.67□□□□□ -0.38
SHMT2-210ENST00000553950 CCDC58Q4VC31 144 aa12.67□□□□□ -0.38
SHMT2-210ENST00000553950 VASH1Q7L8A9 365 aaPredicted RBP12.67□□□□□ -0.38
SHMT2-210ENST00000553950 LHFPL3Q86UP9 236 aa12.67□□□□□ -0.38
SHMT2-210ENST00000553950 YIPF7Q8N8F6 280 aa12.67□□□□□ -0.38
SHMT2-210ENST00000553950 OR1J2Q8NGS2 313 aa12.67□□□□□ -0.38
SHMT2-210ENST00000553950 HSD17B8Q92506 261 aa12.67□□□□□ -0.38
SHMT2-210ENST00000553950 MAP6Q96JE9 813 aa12.67□□□□□ -0.38
SHMT2-210ENST00000553950 C4orf36Q96KX1 117 aa12.67□□□□□ -0.38
SHMT2-210ENST00000553950 DCLRE1CQ96SD1 692 aaKnown RBP12.67□□□□□ -0.38
SHMT2-210ENST00000553950 NGBQ9NPG2 151 aa12.67□□□□□ -0.38
SHMT2-210ENST00000553950 ISYNA1Q9NPH2 558 aa12.67□□□□□ -0.38
SHMT2-210ENST00000553950 KLHDC2Q9Y2U9 406 aa12.67□□□□□ -0.38
SHMT2-210ENST00000553950 KALRNO60229 2985 aa12.67□□□□□ -0.38
SHMT2-210ENST00000553950 HCFC1P51610 2035 aa12.66□□□□□ -0.38
SHMT2-210ENST00000553950 RER1O15258 196 aa12.66□□□□□ -0.38
SHMT2-210ENST00000553950 HLA-HP01893 362 aa12.66□□□□□ -0.38
SHMT2-210ENST00000553950 PSKH1P11801 424 aa12.66□□□□□ -0.38
SHMT2-210ENST00000553950 APLNRP35414 380 aa12.66□□□□□ -0.38
SHMT2-210ENST00000553950 TGM4P49221 684 aa12.66□□□□□ -0.38
SHMT2-210ENST00000553950 NR1H2P55055 460 aa12.66□□□□□ -0.38
SHMT2-210ENST00000553950 PSMA6P60900 246 aaKnown RBP12.66□□□□□ -0.38
SHMT2-210ENST00000553950 RAB1AP62820 205 aa12.66□□□□□ -0.38
SHMT2-210ENST00000553950 PSG4Q00888 419 aa12.66□□□□□ -0.38
SHMT2-210ENST00000553950 EMX1Q04741 257 aaPredicted RBP12.66□□□□□ -0.38
SHMT2-210ENST00000553950 PIGFQ07326 219 aa12.66□□□□□ -0.38
SHMT2-210ENST00000553950 ACSM1Q08AH1 577 aa12.66□□□□□ -0.38
SHMT2-210ENST00000553950 PPA1Q15181 289 aa12.66□□□□□ -0.38
SHMT2-210ENST00000553950 MED22Q15528 200 aa12.66□□□□□ -0.38
SHMT2-210ENST00000553950 PABPC1L2AQ5JQF8 200 aa12.66□□□□□ -0.38
SHMT2-210ENST00000553950 UBE2UQ5VVX9 321 aa12.66□□□□□ -0.38
SHMT2-210ENST00000553950 TMEM154Q6P9G4 183 aa12.66□□□□□ -0.38
SHMT2-210ENST00000553950 ARL9Q6T311 187 aa12.66□□□□□ -0.38
SHMT2-210ENST00000553950 UNQ6126/PRO20091Q6UXV3 157 aa12.66□□□□□ -0.38
SHMT2-210ENST00000553950 KCTD8Q6ZWB6 473 aa12.66□□□□□ -0.38
SHMT2-210ENST00000553950 RFLNBQ8N5W9 214 aa12.66□□□□□ -0.38
SHMT2-210ENST00000553950 OR1F12Q8NHA8 337 aa12.66□□□□□ -0.38
SHMT2-210ENST00000553950 ITLN2Q8WWU7 325 aaPredicted RBP12.66□□□□□ -0.38
SHMT2-210ENST00000553950 SGCDQ92629 289 aa12.66□□□□□ -0.38
SHMT2-210ENST00000553950 HTRA1Q92743 480 aa12.66□□□□□ -0.38
SHMT2-210ENST00000553950 S100PBPQ96BU1 408 aa12.66□□□□□ -0.38
SHMT2-210ENST00000553950 KCNJ15Q99712 375 aa12.66□□□□□ -0.38
SHMT2-210ENST00000553950 PNRC2Q9NPJ4 139 aaKnown RBP12.66□□□□□ -0.38
SHMT2-210ENST00000553950 CENPMQ9NSP4 180 aa12.66□□□□□ -0.38
SHMT2-210ENST00000553950 ZNF224Q9NZL3 707 aa12.66□□□□□ -0.38
SHMT2-210ENST00000553950 LRP12Q9Y561 859 aa12.66□□□□□ -0.38
SHMT2-210ENST00000553950 ACOD1A6NK06 481 aa12.65□□□□□ -0.38
SHMT2-210ENST00000553950 J3QLW9 94 aa12.65□□□□□ -0.38
SHMT2-210ENST00000553950 J3QW42 95 aa12.65□□□□□ -0.38
SHMT2-210ENST00000553950 SYNGR3O43761 229 aa12.65□□□□□ -0.38
SHMT2-210ENST00000553950 ZG16O60844 167 aa12.65□□□□□ -0.38
SHMT2-210ENST00000553950 ABHD16AO95870 558 aa12.65□□□□□ -0.38
SHMT2-210ENST00000553950 IGKV3-15P01624 115 aa12.65□□□□□ -0.38
SHMT2-210ENST00000553950 CBR1P16152 277 aa12.65□□□□□ -0.38
SHMT2-210ENST00000553950 ZNF19P17023 458 aa12.65□□□□□ -0.38
SHMT2-210ENST00000553950 PCMT1P22061 227 aa12.65□□□□□ -0.38
SHMT2-210ENST00000553950 CCKARP32238 428 aa12.65□□□□□ -0.38
SHMT2-210ENST00000553950 TTKP33981 857 aa12.65□□□□□ -0.38
SHMT2-210ENST00000553950 RGS6P49758 472 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms