RNA–Protein interactions for RNA: ENST00000553527.1

TDP1-205, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-205ENST00000553527 OR52E2Q8NGJ4 325 aa20.28■□□□□ 0.84
TDP1-205ENST00000553527 GABARAPL3Q9BY60 117 aa20.28■□□□□ 0.84
TDP1-205ENST00000553527 OR2H1Q9GZK4 316 aa20.28■□□□□ 0.84
TDP1-205ENST00000553527 WNT5BQ9H1J7 359 aa20.28■□□□□ 0.84
TDP1-205ENST00000553527 VSX1Q9NZR4 365 aaPredicted RBP20.28■□□□□ 0.84
TDP1-205ENST00000553527 NKX1-2Q9UD57 310 aaPredicted RBP20.28■□□□□ 0.84
TDP1-205ENST00000553527 KLHL21Q9UJP4 597 aa20.28■□□□□ 0.84
TDP1-205ENST00000553527 FBXO9Q9UK97 447 aaPredicted RBP20.28■□□□□ 0.84
TDP1-205ENST00000553527 NF1P21359 2839 aa20.27■□□□□ 0.84
TDP1-205ENST00000553527 A0A1W2PPW3 197 aa20.27■□□□□ 0.84
TDP1-205ENST00000553527 RIIAD1A6NNX1 92 aa20.27■□□□□ 0.84
TDP1-205ENST00000553527 C12orf71A8MTZ7 269 aa20.27■□□□□ 0.84
TDP1-205ENST00000553527 SYNGR3O43761 229 aa20.27■□□□□ 0.84
TDP1-205ENST00000553527 KHDRBS3O75525 346 aaKnown RBP20.27■□□□□ 0.84
TDP1-205ENST00000553527 MPZL1O95297 269 aa20.27■□□□□ 0.84
TDP1-205ENST00000553527 CLPTM1O96005 669 aa20.27■□□□□ 0.84
TDP1-205ENST00000553527 CSF3P09919 207 aa20.27■□□□□ 0.84
TDP1-205ENST00000553527 SLC34A1Q06495 639 aa20.27■□□□□ 0.84
TDP1-205ENST00000553527 LRRC36Q1X8D7 754 aa20.27■□□□□ 0.84
TDP1-205ENST00000553527 ZNF774Q6NX45 483 aa20.27■□□□□ 0.84
TDP1-205ENST00000553527 ZSCAN2Q7Z7L9 614 aaPredicted RBP20.27■□□□□ 0.84
TDP1-205ENST00000553527 TSSK2Q96PF2 358 aa20.27■□□□□ 0.84
TDP1-205ENST00000553527 SNX18Q96RF0 628 aa20.27■□□□□ 0.84
TDP1-205ENST00000553527 NMNAT3Q96T66 252 aa20.27■□□□□ 0.84
TDP1-205ENST00000553527 SLC29A1Q99808 456 aa20.27■□□□□ 0.84
TDP1-205ENST00000553527 NUAK2Q9H093 628 aa20.27■□□□□ 0.84
TDP1-205ENST00000553527 EIF3KQ9UBQ5 218 aaKnown RBP20.27■□□□□ 0.84
TDP1-205ENST00000553527 LOC100509620A0A075B734 347 aa20.26■□□□□ 0.83
TDP1-205ENST00000553527 M0R233 179 aa20.26■□□□□ 0.83
TDP1-205ENST00000553527 SNAP29O95721 258 aa20.26■□□□□ 0.83
TDP1-205ENST00000553527 SLC25A16P16260 332 aa20.26■□□□□ 0.83
TDP1-205ENST00000553527 ZNF3P17036 446 aa20.26■□□□□ 0.83
TDP1-205ENST00000553527 HOXB4P17483 251 aaPredicted RBP20.26■□□□□ 0.83
TDP1-205ENST00000553527 EVX1P49640 407 aa20.26■□□□□ 0.83
TDP1-205ENST00000553527 CDK5Q00535 292 aa20.26■□□□□ 0.83
TDP1-205ENST00000553527 DBPQ10586 325 aaPredicted RBP20.26■□□□□ 0.83
TDP1-205ENST00000553527 PTGES3Q15185 160 aaKnown RBP20.26■□□□□ 0.83
TDP1-205ENST00000553527 TMEM236Q5W0B7 351 aa20.26■□□□□ 0.83
TDP1-205ENST00000553527 OR1J1Q8NGS3 322 aa20.26■□□□□ 0.83
TDP1-205ENST00000553527 C11orf40Q8WZ69 217 aa20.26■□□□□ 0.83
TDP1-205ENST00000553527 POM121L2Q96KW2 1035 aa20.26■□□□□ 0.83
TDP1-205ENST00000553527 PRRG3Q9BZD7 231 aa20.26■□□□□ 0.83
TDP1-205ENST00000553527 SRA1Q9HD15 236 aaKnown RBP20.26■□□□□ 0.83
TDP1-205ENST00000553527 C8orf4Q9NR00 106 aa20.26■□□□□ 0.83
TDP1-205ENST00000553527 CMC2Q9NRP2 79 aa20.26■□□□□ 0.83
TDP1-205ENST00000553527 CASQ2O14958 399 aaPredicted RBP20.25■□□□□ 0.83
TDP1-205ENST00000553527 GPANK1O95872 356 aa20.25■□□□□ 0.83
TDP1-205ENST00000553527 HMGN1P05114 100 aa20.25■□□□□ 0.83
TDP1-205ENST00000553527 NAT2P11245 290 aa20.25■□□□□ 0.83
TDP1-205ENST00000553527 DAOP14920 347 aa20.25■□□□□ 0.83
TDP1-205ENST00000553527 SELENOVP59797 346 aa20.25■□□□□ 0.83
TDP1-205ENST00000553527 SPATA46Q5T0L3 261 aa20.25■□□□□ 0.83
TDP1-205ENST00000553527 ACSM5Q6NUN0 579 aa20.25■□□□□ 0.83
TDP1-205ENST00000553527 DNM1P34Q6PK57 102 aa20.25■□□□□ 0.83
TDP1-205ENST00000553527 GLB1L2Q8IW92 636 aa20.25■□□□□ 0.83
TDP1-205ENST00000553527 SLC37A3Q8NCC5 494 aa20.25■□□□□ 0.83
TDP1-205ENST00000553527 SYNPRQ8TBG9 265 aa20.25■□□□□ 0.83
TDP1-205ENST00000553527 NEU4Q8WWR8 484 aaPredicted RBP20.25■□□□□ 0.83
TDP1-205ENST00000553527 PLEKHA8Q96JA3 519 aa20.25■□□□□ 0.83
TDP1-205ENST00000553527 PIMREGQ9BSJ6 248 aa20.25■□□□□ 0.83
TDP1-205ENST00000553527 BCL2L14Q9BZR8 327 aa20.25■□□□□ 0.83
TDP1-205ENST00000553527 MS4A5Q9H3V2 200 aa20.25■□□□□ 0.83
TDP1-205ENST00000553527 TAAR3PQ9P1P4 343 aa20.25■□□□□ 0.83
TDP1-205ENST00000553527 ZAR1LA6NP61 321 aa20.24■□□□□ 0.83
TDP1-205ENST00000553527 INAFM1C9JVW0 142 aa20.24■□□□□ 0.83
TDP1-205ENST00000553527 LYNX1G3V0Z9 82 aa20.24■□□□□ 0.83
TDP1-205ENST00000553527 LYNX1P0DP58 116 aa20.24■□□□□ 0.83
TDP1-205ENST00000553527 EPHA2P29317 976 aa20.24■□□□□ 0.83
TDP1-205ENST00000553527 CRABP1P29762 137 aa20.24■□□□□ 0.83
TDP1-205ENST00000553527 KRTAP1-1Q07627 177 aa20.24■□□□□ 0.83
TDP1-205ENST00000553527 CRMP1Q14194 572 aa20.24■□□□□ 0.83
TDP1-205ENST00000553527 GGTLC2Q14390 218 aa20.24■□□□□ 0.83
TDP1-205ENST00000553527 NKPD1Q17RQ9 610 aa20.24■□□□□ 0.83
TDP1-205ENST00000553527 ZIK1Q3SY52 487 aaPredicted RBP20.24■□□□□ 0.83
TDP1-205ENST00000553527 OGFRL1Q5TC84 451 aaPredicted RBP20.24■□□□□ 0.83
TDP1-205ENST00000553527 GALNT4Q8N4A0 578 aa20.24■□□□□ 0.83
TDP1-205ENST00000553527 CYB561A3Q8NBI2 242 aa20.24■□□□□ 0.83
TDP1-205ENST00000553527 NPEPL1Q8NDH3 523 aa20.24■□□□□ 0.83
TDP1-205ENST00000553527 FN3KQ9H479 309 aa20.24■□□□□ 0.83
TDP1-205ENST00000553527 RPRD1BQ9NQG5 326 aaKnown RBP20.24■□□□□ 0.83
TDP1-205ENST00000553527 LOC390937A0A1W2PQ73 354 aa20.23■□□□□ 0.83
TDP1-205ENST00000553527 OR6C68A6NDL8 312 aa20.23■□□□□ 0.83
TDP1-205ENST00000553527 SURF4O15260 269 aa20.23■□□□□ 0.83
TDP1-205ENST00000553527 WNT5AP41221 380 aa20.23■□□□□ 0.83
TDP1-205ENST00000553527 KLF3P57682 345 aaPredicted RBP20.23■□□□□ 0.83
TDP1-205ENST00000553527 RIPK1Q13546 671 aa20.23■□□□□ 0.83
TDP1-205ENST00000553527 SLX4IPQ5VYV7 408 aa20.23■□□□□ 0.83
TDP1-205ENST00000553527 SYT9Q86SS6 491 aa20.23■□□□□ 0.83
TDP1-205ENST00000553527 ZNF101Q8IZC7 436 aa20.23■□□□□ 0.83
TDP1-205ENST00000553527 PACRGLQ8N7B6 248 aa20.23■□□□□ 0.83
TDP1-205ENST00000553527 UBASH3BQ8TF42 649 aa20.23■□□□□ 0.83
TDP1-205ENST00000553527 POM121Q96HA1 1249 aa20.23■□□□□ 0.83
TDP1-205ENST00000553527 TOR3AQ9H497 397 aa20.23■□□□□ 0.83
TDP1-205ENST00000553527 HIVEP2P31629 2446 aa20.23■□□□□ 0.83
TDP1-205ENST00000553527 A0A096LNT2 108 aa20.22■□□□□ 0.83
TDP1-205ENST00000553527 DCTN6O00399 190 aa20.22■□□□□ 0.83
TDP1-205ENST00000553527 ATP6V1G2O95670 118 aa20.22■□□□□ 0.83
TDP1-205ENST00000553527 PAICSP22234 425 aaKnown RBP20.22■□□□□ 0.83
TDP1-205ENST00000553527 USF1P22415 310 aaPredicted RBP20.22■□□□□ 0.83
TDP1-205ENST00000553527 POLR2IP36954 125 aaKnown RBP20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms