RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 PRRC1Q96M27 445 aa8.38□□□□□ -1.07
ACTN1-208ENST00000553370 COG8Q96MW5 612 aa8.38□□□□□ -1.07
ACTN1-208ENST00000553370 SEPHS2Q99611 448 aa8.38□□□□□ -1.07
ACTN1-208ENST00000553370 FNDC11Q9BVV2 318 aa8.38□□□□□ -1.07
ACTN1-208ENST00000553370 EMC7Q9NPA0 242 aa8.38□□□□□ -1.07
ACTN1-208ENST00000553370 ESM1Q9NQ30 184 aa8.38□□□□□ -1.07
ACTN1-208ENST00000553370 MAN2C1Q9NTJ4 1040 aa8.38□□□□□ -1.07
ACTN1-208ENST00000553370 TMEM106BQ9NUM4 274 aa8.38□□□□□ -1.07
ACTN1-208ENST00000553370 MRGBPQ9NV56 204 aa8.38□□□□□ -1.07
ACTN1-208ENST00000553370 GRHPRQ9UBQ7 328 aa8.38□□□□□ -1.07
ACTN1-208ENST00000553370 PPP1R3CQ9UQK1 317 aa8.38□□□□□ -1.07
ACTN1-208ENST00000553370 NOTCH1P46531 2555 aa8.38□□□□□ -1.07
ACTN1-208ENST00000553370 TRBV23-1A0A0A0MS06 115 aa8.37□□□□□ -1.07
ACTN1-208ENST00000553370 IGKV1D-43A0A0B4J1Z2 117 aa8.37□□□□□ -1.07
ACTN1-208ENST00000553370 HTR3EA5X5Y0 456 aa8.37□□□□□ -1.07
ACTN1-208ENST00000553370 MEGF11A6BM72 1044 aa8.37□□□□□ -1.07
ACTN1-208ENST00000553370 BBIP1A8MTZ0 92 aa8.37□□□□□ -1.07
ACTN1-208ENST00000553370 HMGB1P1B2RPK0 211 aaPredicted RBP8.37□□□□□ -1.07
ACTN1-208ENST00000553370 GSTA4O15217 222 aa8.37□□□□□ -1.07
ACTN1-208ENST00000553370 SGCEO43556 437 aa8.37□□□□□ -1.07
ACTN1-208ENST00000553370 ZNF682O95780 498 aa8.37□□□□□ -1.07
ACTN1-208ENST00000553370 NGFP01138 241 aa8.37□□□□□ -1.07
ACTN1-208ENST00000553370 IGF2P01344 180 aa8.37□□□□□ -1.07
ACTN1-208ENST00000553370 IGHV2-70P01814 119 aa8.37□□□□□ -1.07
ACTN1-208ENST00000553370 IFNW1P05000 195 aa8.37□□□□□ -1.07
ACTN1-208ENST00000553370 CD55P08174 381 aa8.37□□□□□ -1.07
ACTN1-208ENST00000553370 TROVE2P10155 538 aaKnown RBP eCLIP8.37□□□□□ -1.07
ACTN1-208ENST00000553370 RPS2P15880 293 aaKnown RBP8.37□□□□□ -1.07
ACTN1-208ENST00000553370 PRTN3P24158 256 aa8.37□□□□□ -1.07
ACTN1-208ENST00000553370 MDH2P40926 338 aaKnown RBP8.37□□□□□ -1.07
ACTN1-208ENST00000553370 MTNR1AP48039 350 aa8.37□□□□□ -1.07
ACTN1-208ENST00000553370 CENPAP49450 140 aa8.37□□□□□ -1.07
ACTN1-208ENST00000553370 ZNF133P52736 654 aaPredicted RBP8.37□□□□□ -1.07
ACTN1-208ENST00000553370 GUCY1A3Q02108 690 aa8.37□□□□□ -1.07
ACTN1-208ENST00000553370 TTMPQ5BVD1 217 aa8.37□□□□□ -1.07
ACTN1-208ENST00000553370 SLC25A47Q6Q0C1 308 aa8.37□□□□□ -1.07
ACTN1-208ENST00000553370 ZNF730Q6ZMV8 503 aa8.37□□□□□ -1.07
ACTN1-208ENST00000553370 CYP4Z1Q86W10 505 aa8.37□□□□□ -1.07
ACTN1-208ENST00000553370 THNSL2Q86YJ6 484 aa8.37□□□□□ -1.07
ACTN1-208ENST00000553370 NRMQ8IXM6 262 aa8.37□□□□□ -1.07
ACTN1-208ENST00000553370 CLDN22Q8N7P3 220 aa8.37□□□□□ -1.07
ACTN1-208ENST00000553370 ZDHHC22Q8N966 263 aa8.37□□□□□ -1.07
ACTN1-208ENST00000553370 ATG16L2Q8NAA4 619 aa8.37□□□□□ -1.07
ACTN1-208ENST00000553370 ITLN1Q8WWA0 313 aa8.37□□□□□ -1.07
ACTN1-208ENST00000553370 LRRC58Q96CX6 371 aa8.37□□□□□ -1.07
ACTN1-208ENST00000553370 MAGEB18Q96M61 343 aa8.37□□□□□ -1.07
ACTN1-208ENST00000553370 ZNF570Q96NI8 536 aa8.37□□□□□ -1.07
ACTN1-208ENST00000553370 PATZ1Q9HBE1 687 aaKnown RBP8.37□□□□□ -1.07
ACTN1-208ENST00000553370 GID8Q9NWU2 228 aa8.37□□□□□ -1.07
ACTN1-208ENST00000553370 PLEK2Q9NYT0 353 aa8.37□□□□□ -1.07
ACTN1-208ENST00000553370 PPIAL4EA0A075B759 164 aa8.36□□□□□ -1.07
ACTN1-208ENST00000553370 IGHV3OR16-10A0A075B7F0 116 aa8.36□□□□□ -1.07
ACTN1-208ENST00000553370 PPIAL4CA0A0B4J2A2 164 aa8.36□□□□□ -1.07
ACTN1-208ENST00000553370 LRRC30A6NM36 301 aa8.36□□□□□ -1.07
ACTN1-208ENST00000553370 FAM220BPB1ANY3 271 aa8.36□□□□□ -1.07
ACTN1-208ENST00000553370 PPIAL4DF5H284 164 aa8.36□□□□□ -1.07
ACTN1-208ENST00000553370 ADH4P08319 380 aa8.36□□□□□ -1.07
ACTN1-208ENST00000553370 PPIAL4FP0DN26 164 aa8.36□□□□□ -1.07
ACTN1-208ENST00000553370 HKR1P10072 659 aa8.36□□□□□ -1.07
ACTN1-208ENST00000553370 IRF2P14316 349 aa8.36□□□□□ -1.07
ACTN1-208ENST00000553370 ZFP36P26651 326 aaKnown RBP8.36□□□□□ -1.07
ACTN1-208ENST00000553370 YAP1P46937 504 aaKnown RBP8.36□□□□□ -1.07
ACTN1-208ENST00000553370 GNB2P62879 340 aa8.36□□□□□ -1.07
ACTN1-208ENST00000553370 PSG7Q13046 419 aa8.36□□□□□ -1.07
ACTN1-208ENST00000553370 ZNF154Q13106 437 aa8.36□□□□□ -1.07
ACTN1-208ENST00000553370 TRAM2Q15035 370 aa8.36□□□□□ -1.07
ACTN1-208ENST00000553370 TMEM155Q4W5P6 130 aa8.36□□□□□ -1.07
ACTN1-208ENST00000553370 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.36□□□□□ -1.07
ACTN1-208ENST00000553370 OR5AS1Q8N127 324 aa8.36□□□□□ -1.07
ACTN1-208ENST00000553370 OR2T12Q8NG77 320 aa8.36□□□□□ -1.07
ACTN1-208ENST00000553370 OR52E2Q8NGJ4 325 aa8.36□□□□□ -1.07
ACTN1-208ENST00000553370 OR13C2Q8NGS9 318 aa8.36□□□□□ -1.07
ACTN1-208ENST00000553370 STON2Q8WXE9 905 aa8.36□□□□□ -1.07
ACTN1-208ENST00000553370 CMBLQ96DG6 245 aa8.36□□□□□ -1.07
ACTN1-208ENST00000553370 PLEKHA8Q96JA3 519 aa8.36□□□□□ -1.07
ACTN1-208ENST00000553370 SAMD8Q96LT4 415 aa8.36□□□□□ -1.07
ACTN1-208ENST00000553370 OR2V2Q96R30 315 aa8.36□□□□□ -1.07
ACTN1-208ENST00000553370 ZNF747Q9BV97 191 aa8.36□□□□□ -1.07
ACTN1-208ENST00000553370 TMEM120AQ9BXJ8 343 aa8.36□□□□□ -1.07
ACTN1-208ENST00000553370 UNKLQ9H9P5 680 aaKnown RBP8.36□□□□□ -1.07
ACTN1-208ENST00000553370 POLE4Q9NR33 117 aa8.36□□□□□ -1.07
ACTN1-208ENST00000553370 DCAF16Q9NXF7 216 aa8.36□□□□□ -1.07
ACTN1-208ENST00000553370 PTTG3PQ9NZH4 202 aa8.36□□□□□ -1.07
ACTN1-208ENST00000553370 KIF17Q9P2E2 1029 aa8.36□□□□□ -1.07
ACTN1-208ENST00000553370 RHCGQ9UBD6 479 aa8.36□□□□□ -1.07
ACTN1-208ENST00000553370 ZNF69Q9UC07 566 aa8.36□□□□□ -1.07
ACTN1-208ENST00000553370 OPN4Q9UHM6 478 aa8.36□□□□□ -1.07
ACTN1-208ENST00000553370 LRCH1Q9Y2L9 728 aa8.36□□□□□ -1.07
ACTN1-208ENST00000553370 IFNL4K9M1U5 179 aa8.35□□□□□ -1.07
ACTN1-208ENST00000553370 FBP2O00757 339 aa8.35□□□□□ -1.07
ACTN1-208ENST00000553370 GPANK1O95872 356 aa8.35□□□□□ -1.07
ACTN1-208ENST00000553370 CRYBA1P05813 215 aa8.35□□□□□ -1.07
ACTN1-208ENST00000553370 TUBG1P23258 451 aa8.35□□□□□ -1.07
ACTN1-208ENST00000553370 GPR4P46093 362 aa8.35□□□□□ -1.07
ACTN1-208ENST00000553370 SLC9A3P48764 834 aa8.35□□□□□ -1.07
ACTN1-208ENST00000553370 SRP9P49458 86 aaKnown RBP8.35□□□□□ -1.07
ACTN1-208ENST00000553370 CRYBA2P53672 197 aa8.35□□□□□ -1.07
ACTN1-208ENST00000553370 SEC61A1P61619 476 aaKnown RBP8.35□□□□□ -1.07
ACTN1-208ENST00000553370 IL13RA1P78552 427 aa8.35□□□□□ -1.07
ACTN1-208ENST00000553370 SF3A3Q12874 501 aaKnown RBP eCLIP8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms