RNA–Protein interactions for RNA: ENST00000553287.5

ATXN3-217, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-217ENST00000553287 TSC22D1Q15714 1073 aa3.19□□□□□ -1.9
ATXN3-217ENST00000553287 STX1AQ16623 288 aa3.19□□□□□ -1.9
ATXN3-217ENST00000553287 TMEM249Q2WGJ8 235 aa3.19□□□□□ -1.9
ATXN3-217ENST00000553287 KCTD11Q693B1 232 aa3.19□□□□□ -1.9
ATXN3-217ENST00000553287 ZNF544Q6NX49 715 aa3.19□□□□□ -1.9
ATXN3-217ENST00000553287 PPP1R2P3Q6NXS1 205 aa3.19□□□□□ -1.9
ATXN3-217ENST00000553287 DGAT2L6Q6ZPD8 337 aa3.19□□□□□ -1.9
ATXN3-217ENST00000553287 RTL4Q6ZR62 310 aa3.19□□□□□ -1.9
ATXN3-217ENST00000553287 CA13Q8N1Q1 262 aa3.19□□□□□ -1.9
ATXN3-217ENST00000553287 CNEP1R1Q8N9A8 125 aa3.19□□□□□ -1.9
ATXN3-217ENST00000553287 KRT35Q92764 455 aa3.19□□□□□ -1.9
ATXN3-217ENST00000553287 VMP1Q96GC9 406 aa3.19□□□□□ -1.9
ATXN3-217ENST00000553287 VSIG2Q96IQ7 327 aa3.19□□□□□ -1.9
ATXN3-217ENST00000553287 ALS2CR12Q96Q35 445 aa3.19□□□□□ -1.9
ATXN3-217ENST00000553287 C19orf43Q9BQ61 176 aa3.19□□□□□ -1.9
ATXN3-217ENST00000553287 CCDC77Q9BR77 488 aa3.19□□□□□ -1.9
ATXN3-217ENST00000553287 CARD6Q9BX69 1037 aa3.19□□□□□ -1.9
ATXN3-217ENST00000553287 UGT2B28Q9BY64 529 aa3.19□□□□□ -1.9
ATXN3-217ENST00000553287 OR8D2Q9GZM6 311 aa3.19□□□□□ -1.9
ATXN3-217ENST00000553287 EML4Q9HC35 981 aaKnown RBP3.19□□□□□ -1.9
ATXN3-217ENST00000553287 LIPT1Q9Y234 373 aa3.19□□□□□ -1.9
ATXN3-217ENST00000553287 YARS2Q9Y2Z4 477 aaKnown RBP3.19□□□□□ -1.9
ATXN3-217ENST00000553287 PRKDCP78527 4128 aaKnown RBP3.19□□□□□ -1.9
ATXN3-217ENST00000553287 MED12LQ86YW9 2145 aa3.19□□□□□ -1.9
ATXN3-217ENST00000553287 NOTCH1P46531 2555 aa3.18□□□□□ -1.9
ATXN3-217ENST00000553287 KMT2CQ8NEZ4 4911 aaKnown RBP3.18□□□□□ -1.9
ATXN3-217ENST00000553287 ROS1P08922 2347 aa3.18□□□□□ -1.9
ATXN3-217ENST00000553287 A0A096LNT2 108 aa3.18□□□□□ -1.9
ATXN3-217ENST00000553287 A0A1W2PNV4 684 aa3.18□□□□□ -1.9
ATXN3-217ENST00000553287 FRG2CA6NGY1 282 aa3.18□□□□□ -1.9
ATXN3-217ENST00000553287 WASHC1A8K0Z3 465 aa3.18□□□□□ -1.9
ATXN3-217ENST00000553287 H0YC42 278 aa3.18□□□□□ -1.9
ATXN3-217ENST00000553287 PRMT5O14744 637 aaPredicted RBP3.18□□□□□ -1.9
ATXN3-217ENST00000553287 CLOCKO15516 846 aa3.18□□□□□ -1.9
ATXN3-217ENST00000553287 PSMD3O43242 534 aa3.18□□□□□ -1.9
ATXN3-217ENST00000553287 HCN1O60741 890 aa3.18□□□□□ -1.9
ATXN3-217ENST00000553287 PSIP1O75475 530 aaKnown RBP3.18□□□□□ -1.9
ATXN3-217ENST00000553287 TNFSF13O75888 250 aa3.18□□□□□ -1.9
ATXN3-217ENST00000553287 CLDN9O95484 217 aa3.18□□□□□ -1.9
ATXN3-217ENST00000553287 ETHE1O95571 254 aa3.18□□□□□ -1.9
ATXN3-217ENST00000553287 PRB2P02812 416 aaPredicted RBP3.18□□□□□ -1.9
ATXN3-217ENST00000553287 ETS1P14921 441 aa3.18□□□□□ -1.9
ATXN3-217ENST00000553287 OPRM1P35372 400 aa3.18□□□□□ -1.9
ATXN3-217ENST00000553287 UGT2B10P36537 528 aa3.18□□□□□ -1.9
ATXN3-217ENST00000553287 PEX19P40855 299 aa3.18□□□□□ -1.9
ATXN3-217ENST00000553287 CASP9P55211 416 aa3.18□□□□□ -1.9
ATXN3-217ENST00000553287 EIF3EP60228 445 aaKnown RBP3.18□□□□□ -1.9
ATXN3-217ENST00000553287 RPS15AP62244 130 aaKnown RBP3.18□□□□□ -1.9
ATXN3-217ENST00000553287 UBE2HP62256 183 aa3.18□□□□□ -1.9
ATXN3-217ENST00000553287 TBPL1P62380 186 aa3.18□□□□□ -1.9
ATXN3-217ENST00000553287 BTN3A2P78410 334 aa3.18□□□□□ -1.9
ATXN3-217ENST00000553287 MYL5Q02045 173 aa3.18□□□□□ -1.9
ATXN3-217ENST00000553287 PLOD1Q02809 727 aaPredicted RBP3.18□□□□□ -1.9
ATXN3-217ENST00000553287 PRPSAP1Q14558 356 aa3.18□□□□□ -1.9
ATXN3-217ENST00000553287 TMED2Q15363 201 aa3.18□□□□□ -1.9
ATXN3-217ENST00000553287 ZNF791Q3KP31 576 aaPredicted RBP3.18□□□□□ -1.9
ATXN3-217ENST00000553287 TOR1AIP1Q5JTV8 583 aa3.18□□□□□ -1.9
ATXN3-217ENST00000553287 FAM120AOSQ5T036 256 aa3.18□□□□□ -1.9
ATXN3-217ENST00000553287 SLC22A10Q63ZE4 541 aa3.18□□□□□ -1.9
ATXN3-217ENST00000553287 DMKNQ6E0U4 476 aaPredicted RBP3.18□□□□□ -1.9
ATXN3-217ENST00000553287 ADNP2Q6IQ32 1131 aa3.18□□□□□ -1.9
ATXN3-217ENST00000553287 STEAP1BQ6NZ63 245 aa3.18□□□□□ -1.9
ATXN3-217ENST00000553287 AFTPHQ6ULP2 937 aa3.18□□□□□ -1.9
ATXN3-217ENST00000553287 SBSNQ6UWP8 590 aa3.18□□□□□ -1.9
ATXN3-217ENST00000553287 HSDL2Q6YN16 418 aa3.18□□□□□ -1.9
ATXN3-217ENST00000553287 RGS9BPQ6ZS82 235 aa3.18□□□□□ -1.9
ATXN3-217ENST00000553287 LUZP1Q86V48 1076 aa3.18□□□□□ -1.9
ATXN3-217ENST00000553287 C9orf40Q8IXQ3 194 aa3.18□□□□□ -1.9
ATXN3-217ENST00000553287 ZNF619Q8N2I2 560 aa3.18□□□□□ -1.9
ATXN3-217ENST00000553287 LRRC25Q8N386 305 aaPredicted RBP3.18□□□□□ -1.9
ATXN3-217ENST00000553287 GPR137CQ8N3F9 429 aa3.18□□□□□ -1.9
ATXN3-217ENST00000553287 OTUD6BQ8N6M0 293 aa3.18□□□□□ -1.9
ATXN3-217ENST00000553287 OR8K1Q8NGG5 319 aa3.18□□□□□ -1.9
ATXN3-217ENST00000553287 LINC01006Q8NI28 216 aa3.18□□□□□ -1.9
ATXN3-217ENST00000553287 ACTL9Q8TC94 416 aa3.18□□□□□ -1.9
ATXN3-217ENST00000553287 PPWD1Q96BP3 646 aaKnown RBP3.18□□□□□ -1.9
ATXN3-217ENST00000553287 STARD4Q96DR4 205 aa3.18□□□□□ -1.9
ATXN3-217ENST00000553287 TSNARE1Q96NA8 513 aa3.18□□□□□ -1.9
ATXN3-217ENST00000553287 FOPNLQ96NB1 174 aa3.18□□□□□ -1.9
ATXN3-217ENST00000553287 BIRC8Q96P09 236 aa3.18□□□□□ -1.9
ATXN3-217ENST00000553287 ANGPTL4Q9BY76 406 aa3.18□□□□□ -1.9
ATXN3-217ENST00000553287 CHRAC1Q9NRG0 131 aa3.18□□□□□ -1.9
ATXN3-217ENST00000553287 PRTFDC1Q9NRG1 225 aa3.18□□□□□ -1.9
ATXN3-217ENST00000553287 DDX28Q9NUL7 540 aaKnown RBP3.18□□□□□ -1.9
ATXN3-217ENST00000553287 SPATA7Q9P0W8 599 aa3.18□□□□□ -1.9
ATXN3-217ENST00000553287 SPACA6W5XKT8 324 aa3.18□□□□□ -1.9
ATXN3-217ENST00000553287 PRR14LQ5THK1 2151 aa3.18□□□□□ -1.9
ATXN3-217ENST00000553287 MALRD1Q5VYJ5 2156 aa3.17□□□□□ -1.9
ATXN3-217ENST00000553287 KCNE1BA0A087WTH5 132 aa3.17□□□□□ -1.9
ATXN3-217ENST00000553287 WI2-2373I1.2A0A1W2PRP0 233 aa3.17□□□□□ -1.9
ATXN3-217ENST00000553287 PSMD12O00232 456 aaPredicted RBP3.17□□□□□ -1.9
ATXN3-217ENST00000553287 TXNDC9O14530 226 aa3.17□□□□□ -1.9
ATXN3-217ENST00000553287 SPOPO43791 374 aa3.17□□□□□ -1.9
ATXN3-217ENST00000553287 TRIM3O75382 744 aaPredicted RBP3.17□□□□□ -1.9
ATXN3-217ENST00000553287 GMNNO75496 209 aa3.17□□□□□ -1.9
ATXN3-217ENST00000553287 RCBTB2O95199 551 aa3.17□□□□□ -1.9
ATXN3-217ENST00000553287 C1QAP02745 245 aa3.17□□□□□ -1.9
ATXN3-217ENST00000553287 H2AFZP0C0S5 128 aa3.17□□□□□ -1.9
ATXN3-217ENST00000553287 SLC35G6P0C7Q6 338 aa3.17□□□□□ -1.9
ATXN3-217ENST00000553287 RNH1P13489 461 aaKnown RBP3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms