RNA–Protein interactions for RNA: ENST00000552130.6

VPS29-210, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-210ENST00000552130 NTSP30990 170 aa5.23□□□□□ -1.57
VPS29-210ENST00000552130 RARRES1P49788 294 aa5.23□□□□□ -1.57
VPS29-210ENST00000552130 RAB8AP61006 207 aa5.23□□□□□ -1.57
VPS29-210ENST00000552130 RND3P61587 244 aa5.23□□□□□ -1.57
VPS29-210ENST00000552130 KRR1Q13601 381 aaKnown RBP5.23□□□□□ -1.57
VPS29-210ENST00000552130 CALCRLQ16602 461 aa5.23□□□□□ -1.57
VPS29-210ENST00000552130 MARC1Q5VT66 337 aa5.23□□□□□ -1.57
VPS29-210ENST00000552130 WDR25Q64LD2 544 aaPredicted RBP5.23□□□□□ -1.57
VPS29-210ENST00000552130 ZNF549Q6P9A3 640 aa5.23□□□□□ -1.57
VPS29-210ENST00000552130 TRIM40Q6P9F5 258 aa5.23□□□□□ -1.57
VPS29-210ENST00000552130 FAM131AQ6UXB0 335 aa5.23□□□□□ -1.57
VPS29-210ENST00000552130 CASP12Q6UXS9 341 aa5.23□□□□□ -1.57
VPS29-210ENST00000552130 BLIDQ8IZY5 108 aa5.23□□□□□ -1.57
VPS29-210ENST00000552130 STK40Q8N2I9 435 aa5.23□□□□□ -1.57
VPS29-210ENST00000552130 OR4D10Q8NGI6 311 aa5.23□□□□□ -1.57
VPS29-210ENST00000552130 OR11L1Q8NGX0 322 aa5.23□□□□□ -1.57
VPS29-210ENST00000552130 RPLP0P6Q8NHW5 317 aa5.23□□□□□ -1.57
VPS29-210ENST00000552130 RASL10AQ92737 203 aa5.23□□□□□ -1.57
VPS29-210ENST00000552130 DYNLL2Q96FJ2 89 aa5.23□□□□□ -1.57
VPS29-210ENST00000552130 C2orf48Q96LS8 159 aa5.23□□□□□ -1.57
VPS29-210ENST00000552130 ZNF681Q96N22 645 aa5.23□□□□□ -1.57
VPS29-210ENST00000552130 TSNAXQ99598 290 aaKnown RBP5.23□□□□□ -1.57
VPS29-210ENST00000552130 APOL4Q9BPW4 351 aa5.23□□□□□ -1.57
VPS29-210ENST00000552130 HOPXQ9BPY8 73 aaPredicted RBP5.23□□□□□ -1.57
VPS29-210ENST00000552130 CALN1Q9BXU9 219 aa5.23□□□□□ -1.57
VPS29-210ENST00000552130 UGT2B28Q9BY64 529 aa5.23□□□□□ -1.57
VPS29-210ENST00000552130 CHIAQ9BZP6 476 aa5.23□□□□□ -1.57
VPS29-210ENST00000552130 SIAEQ9HAT2 523 aa5.23□□□□□ -1.57
VPS29-210ENST00000552130 ACOT13Q9NPJ3 140 aa5.23□□□□□ -1.57
VPS29-210ENST00000552130 MEPEQ9NQ76 525 aaPredicted RBP5.23□□□□□ -1.57
VPS29-210ENST00000552130 TIGARQ9NQ88 270 aa5.23□□□□□ -1.57
VPS29-210ENST00000552130 SEC14L4Q9UDX3 406 aa5.23□□□□□ -1.57
VPS29-210ENST00000552130 RAB26Q9ULW5 256 aa5.23□□□□□ -1.57
VPS29-210ENST00000552130 PPP2R2CQ9Y2T4 447 aa5.23□□□□□ -1.57
VPS29-210ENST00000552130 HS3ST3B1Q9Y662 390 aa5.23□□□□□ -1.57
VPS29-210ENST00000552130 PBRM1Q86U86 1689 aa5.23□□□□□ -1.57
VPS29-210ENST00000552130 FAM166BA8MTA8 275 aa5.22□□□□□ -1.57
VPS29-210ENST00000552130 PSMD12O00232 456 aaPredicted RBP5.22□□□□□ -1.57
VPS29-210ENST00000552130 KPNA3O00505 521 aaPredicted RBP5.22□□□□□ -1.57
VPS29-210ENST00000552130 ERI3O43414 337 aaKnown RBP5.22□□□□□ -1.57
VPS29-210ENST00000552130 FADS1O60427 444 aa5.22□□□□□ -1.57
VPS29-210ENST00000552130 STX10O60499 249 aa5.22□□□□□ -1.57
VPS29-210ENST00000552130 UGT1A9O60656 530 aa5.22□□□□□ -1.57
VPS29-210ENST00000552130 CTNSO60931 367 aa5.22□□□□□ -1.57
VPS29-210ENST00000552130 GATBO75879 557 aaKnown RBP5.22□□□□□ -1.57
VPS29-210ENST00000552130 RLN2P04090 185 aa5.22□□□□□ -1.57
VPS29-210ENST00000552130 RPLP0P05388 317 aaKnown RBP5.22□□□□□ -1.57
VPS29-210ENST00000552130 SLC2A1P11166 492 aa5.22□□□□□ -1.57
VPS29-210ENST00000552130 HLA-DOBP13765 273 aa5.22□□□□□ -1.57
VPS29-210ENST00000552130 SDC1P18827 310 aa5.22□□□□□ -1.57
VPS29-210ENST00000552130 CALML3P27482 149 aa5.22□□□□□ -1.57
VPS29-210ENST00000552130 HTR1FP30939 366 aa5.22□□□□□ -1.57
VPS29-210ENST00000552130 SSTR5P35346 364 aa5.22□□□□□ -1.57
VPS29-210ENST00000552130 PTGDSP41222 190 aa5.22□□□□□ -1.57
VPS29-210ENST00000552130 PEX3P56589 373 aa5.22□□□□□ -1.57
VPS29-210ENST00000552130 ACVR1Q04771 509 aa5.22□□□□□ -1.57
VPS29-210ENST00000552130 ZNF91Q05481 1191 aa5.22□□□□□ -1.57
VPS29-210ENST00000552130 TNFRSF9Q07011 255 aa5.22□□□□□ -1.57
VPS29-210ENST00000552130 ST3GAL4Q11206 333 aa5.22□□□□□ -1.57
VPS29-210ENST00000552130 ZNF154Q13106 437 aa5.22□□□□□ -1.57
VPS29-210ENST00000552130 TRAM1Q15629 374 aa5.22□□□□□ -1.57
VPS29-210ENST00000552130 TBC1D28Q2M2D7 210 aa5.22□□□□□ -1.57
VPS29-210ENST00000552130 ZBED5Q49AG3 693 aa5.22□□□□□ -1.57
VPS29-210ENST00000552130 TRIQKQ629K1 86 aa5.22□□□□□ -1.57
VPS29-210ENST00000552130 ZNF530Q6P9A1 599 aaPredicted RBP5.22□□□□□ -1.57
VPS29-210ENST00000552130 WDR82Q6UXN9 313 aa5.22□□□□□ -1.57
VPS29-210ENST00000552130 PTF1AQ7RTS3 328 aa5.22□□□□□ -1.57
VPS29-210ENST00000552130 OR1M1Q8NGA1 313 aa5.22□□□□□ -1.57
VPS29-210ENST00000552130 GATAD1Q8WUU5 269 aa5.22□□□□□ -1.57
VPS29-210ENST00000552130 RNF138Q8WVD3 245 aa5.22□□□□□ -1.57
VPS29-210ENST00000552130 RASSF5Q8WWW0 418 aa5.22□□□□□ -1.57
VPS29-210ENST00000552130 RAB8BQ92930 207 aa5.22□□□□□ -1.57
VPS29-210ENST00000552130 RMND5BQ96G75 393 aaPredicted RBP5.22□□□□□ -1.57
VPS29-210ENST00000552130 SEC22AQ96IW7 307 aa5.22□□□□□ -1.57
VPS29-210ENST00000552130 POM121L2Q96KW2 1035 aa5.22□□□□□ -1.57
VPS29-210ENST00000552130 SDHCQ99643 169 aaPredicted RBP5.22□□□□□ -1.57
VPS29-210ENST00000552130 NKX3-1Q99801 234 aaPredicted RBP5.22□□□□□ -1.57
VPS29-210ENST00000552130 TMEM208Q9BTX3 173 aa5.22□□□□□ -1.57
VPS29-210ENST00000552130 TMEM109Q9BVC6 243 aa5.22□□□□□ -1.57
VPS29-210ENST00000552130 PARVBQ9HBI1 364 aa5.22□□□□□ -1.57
VPS29-210ENST00000552130 ADGRL4Q9HBW9 690 aa5.22□□□□□ -1.57
VPS29-210ENST00000552130 FBXO6Q9NRD1 293 aaPredicted RBP5.22□□□□□ -1.57
VPS29-210ENST00000552130 DDX19AQ9NUU7 478 aaKnown RBP5.22□□□□□ -1.57
VPS29-210ENST00000552130 Q9UF83 564 aa5.22□□□□□ -1.57
VPS29-210ENST00000552130 GNPTGQ9UJJ9 305 aa5.22□□□□□ -1.57
VPS29-210ENST00000552130 SAMD4AQ9UPU9 718 aaKnown RBP5.22□□□□□ -1.57
VPS29-210ENST00000552130 ASF1AQ9Y294 204 aa5.22□□□□□ -1.57
VPS29-210ENST00000552130 GOLT1BQ9Y3E0 138 aa5.22□□□□□ -1.57
VPS29-210ENST00000552130 CPQQ9Y646 472 aa5.22□□□□□ -1.57
VPS29-210ENST00000552130 FLT4P35916 1363 aa5.21□□□□□ -1.58
VPS29-210ENST00000552130 MTUS2Q5JR59 1369 aa5.21□□□□□ -1.58
VPS29-210ENST00000552130 ABCC11Q96J66 1382 aa5.21□□□□□ -1.58
VPS29-210ENST00000552130 A0A1B0GV72 72 aa5.21□□□□□ -1.58
VPS29-210ENST00000552130 MEIOCA2RUB1 952 aa5.21□□□□□ -1.58
VPS29-210ENST00000552130 EFCAB9A8MZ26 197 aa5.21□□□□□ -1.58
VPS29-210ENST00000552130 ANKRD63C9JTQ0 380 aa5.21□□□□□ -1.58
VPS29-210ENST00000552130 CRXO43186 299 aaPredicted RBP5.21□□□□□ -1.58
VPS29-210ENST00000552130 RAD1O60671 282 aa5.21□□□□□ -1.58
VPS29-210ENST00000552130 CTSVO60911 334 aa5.21□□□□□ -1.58
VPS29-210ENST00000552130 TYMSP04818 313 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms