RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 TRIML2Q8N7C3 387 aa4.43□□□□□ -1.7
HOXB3-213ENST00000552000 CLRN3Q8NCR9 226 aa4.43□□□□□ -1.7
HOXB3-213ENST00000552000 OR5J2Q8NH18 312 aa4.43□□□□□ -1.7
HOXB3-213ENST00000552000 OR6X1Q8NH79 312 aa4.43□□□□□ -1.7
HOXB3-213ENST00000552000 ZNF420Q8TAQ5 688 aaPredicted RBP4.43□□□□□ -1.7
HOXB3-213ENST00000552000 SLC38A5Q8WUX1 472 aa4.43□□□□□ -1.7
HOXB3-213ENST00000552000 DNAJA4Q8WW22 397 aaPredicted RBP4.43□□□□□ -1.7
HOXB3-213ENST00000552000 LRTOMTQ8WZ04 291 aa4.43□□□□□ -1.7
HOXB3-213ENST00000552000 LHX4Q969G2 390 aa4.43□□□□□ -1.7
HOXB3-213ENST00000552000 ZNF566Q969W8 418 aa4.43□□□□□ -1.7
HOXB3-213ENST00000552000 TESCQ96BS2 214 aa4.43□□□□□ -1.7
HOXB3-213ENST00000552000 TMEM19Q96HH6 336 aa4.43□□□□□ -1.7
HOXB3-213ENST00000552000 TEX37Q96LM6 180 aa4.43□□□□□ -1.7
HOXB3-213ENST00000552000 CCDC115Q96NT0 180 aa4.43□□□□□ -1.7
HOXB3-213ENST00000552000 OR2V2Q96R30 315 aa4.43□□□□□ -1.7
HOXB3-213ENST00000552000 ZNF347Q96SE7 839 aa4.43□□□□□ -1.7
HOXB3-213ENST00000552000 EPYCQ99645 322 aa4.43□□□□□ -1.7
HOXB3-213ENST00000552000 RHOXF2Q9BQY4 288 aa4.43□□□□□ -1.7
HOXB3-213ENST00000552000 DPAGT1Q9H3H5 408 aa4.43□□□□□ -1.7
HOXB3-213ENST00000552000 POFUT1Q9H488 388 aa4.43□□□□□ -1.7
HOXB3-213ENST00000552000 C12orf10Q9HB07 376 aa4.43□□□□□ -1.7
HOXB3-213ENST00000552000 CCNB1IP1Q9NPC3 277 aa4.43□□□□□ -1.7
HOXB3-213ENST00000552000 A4GALTQ9NPC4 353 aa4.43□□□□□ -1.7
HOXB3-213ENST00000552000 MKS1Q9NXB0 559 aa4.43□□□□□ -1.7
HOXB3-213ENST00000552000 ASIC5Q9NY37 505 aa4.43□□□□□ -1.7
HOXB3-213ENST00000552000 MRPL39Q9NYK5 338 aaKnown RBP4.43□□□□□ -1.7
HOXB3-213ENST00000552000 CALML5Q9NZT1 146 aa4.43□□□□□ -1.7
HOXB3-213ENST00000552000 P2RX2Q9UBL9 471 aa4.43□□□□□ -1.7
HOXB3-213ENST00000552000 BTNL2Q9UIR0 455 aa4.43□□□□□ -1.7
HOXB3-213ENST00000552000 STARD9Q9P2P6 4700 aa4.42□□□□□ -1.7
HOXB3-213ENST00000552000 A0A0G2JPF8 293 aa4.42□□□□□ -1.7
HOXB3-213ENST00000552000 WI2-2373I1.2A0A1W2PRP0 233 aa4.42□□□□□ -1.7
HOXB3-213ENST00000552000 BTBD17A6NE02 478 aa4.42□□□□□ -1.7
HOXB3-213ENST00000552000 HNRNPCL2B2RXH8 293 aa4.42□□□□□ -1.7
HOXB3-213ENST00000552000 HNRNPCL3B7ZW38 293 aa4.42□□□□□ -1.7
HOXB3-213ENST00000552000 IFNL4K9M1U5 179 aa4.42□□□□□ -1.7
HOXB3-213ENST00000552000 PHYHO14832 338 aa4.42□□□□□ -1.7
HOXB3-213ENST00000552000 SURF4O15260 269 aa4.42□□□□□ -1.7
HOXB3-213ENST00000552000 RIPK2O43353 540 aa4.42□□□□□ -1.7
HOXB3-213ENST00000552000 MGRN1O60291 552 aa4.42□□□□□ -1.7
HOXB3-213ENST00000552000 HNRNPCL1O60812 293 aaKnown RBP4.42□□□□□ -1.7
HOXB3-213ENST00000552000 SHOX2O60902 331 aaPredicted RBP4.42□□□□□ -1.7
HOXB3-213ENST00000552000 OR6A2O95222 327 aa4.42□□□□□ -1.7
HOXB3-213ENST00000552000 KRT75O95678 551 aa4.42□□□□□ -1.7
HOXB3-213ENST00000552000 PPP1R3DO95685 299 aa4.42□□□□□ -1.7
HOXB3-213ENST00000552000 IGHG1P01857 330 aa4.42□□□□□ -1.7
HOXB3-213ENST00000552000 PGA4P0DJD7 388 aa4.42□□□□□ -1.7
HOXB3-213ENST00000552000 PGA3P0DJD8 388 aa4.42□□□□□ -1.7
HOXB3-213ENST00000552000 HNRNPCL4P0DMR1 293 aa4.42□□□□□ -1.7
HOXB3-213ENST00000552000 ETFAP13804 333 aa4.42□□□□□ -1.7
HOXB3-213ENST00000552000 MMP9P14780 707 aa4.42□□□□□ -1.7
HOXB3-213ENST00000552000 IGLL1P15814 213 aa4.42□□□□□ -1.7
HOXB3-213ENST00000552000 CPT2P23786 658 aa4.42□□□□□ -1.7
HOXB3-213ENST00000552000 SLC6A2P23975 617 aa4.42□□□□□ -1.7
HOXB3-213ENST00000552000 ALDH3A1P30838 453 aa4.42□□□□□ -1.7
HOXB3-213ENST00000552000 CASQ1P31415 396 aa4.42□□□□□ -1.7
HOXB3-213ENST00000552000 CDAP32320 146 aa4.42□□□□□ -1.7
HOXB3-213ENST00000552000 TGFBR2P37173 567 aa4.42□□□□□ -1.7
HOXB3-213ENST00000552000 CRATP43155 626 aa4.42□□□□□ -1.7
HOXB3-213ENST00000552000 ZNF84P51523 738 aa4.42□□□□□ -1.7
HOXB3-213ENST00000552000 ARHGDIAP52565 204 aa4.42□□□□□ -1.7
HOXB3-213ENST00000552000 MVDP53602 400 aa4.42□□□□□ -1.7
HOXB3-213ENST00000552000 CLNS1AP54105 237 aaKnown RBP4.42□□□□□ -1.7
HOXB3-213ENST00000552000 CLRN1P58418 232 aa4.42□□□□□ -1.7
HOXB3-213ENST00000552000 DSTNP60981 165 aa4.42□□□□□ -1.7
HOXB3-213ENST00000552000 PSG4Q00888 419 aa4.42□□□□□ -1.7
HOXB3-213ENST00000552000 COL10A1Q03692 680 aa4.42□□□□□ -1.7
HOXB3-213ENST00000552000 CD69Q07108 199 aa4.42□□□□□ -1.7
HOXB3-213ENST00000552000 SGCAQ16586 387 aa4.42□□□□□ -1.7
HOXB3-213ENST00000552000 ZNF404Q494X3 552 aa4.42□□□□□ -1.7
HOXB3-213ENST00000552000 PDCD4Q53EL6 469 aaKnown RBP4.42□□□□□ -1.7
HOXB3-213ENST00000552000 ANKRD39Q53RE8 183 aa4.42□□□□□ -1.7
HOXB3-213ENST00000552000 CEP85LQ5SZL2 805 aa4.42□□□□□ -1.7
HOXB3-213ENST00000552000 TRMT10CQ7L0Y3 403 aaKnown RBP4.42□□□□□ -1.7
HOXB3-213ENST00000552000 ZNF572Q7Z3I7 529 aaPredicted RBP4.42□□□□□ -1.7
HOXB3-213ENST00000552000 ZER1Q7Z7L7 766 aa4.42□□□□□ -1.7
HOXB3-213ENST00000552000 MOGAT3Q86VF5 341 aa4.42□□□□□ -1.7
HOXB3-213ENST00000552000 COMTD1Q86VU5 262 aa4.42□□□□□ -1.7
HOXB3-213ENST00000552000 PTOV1Q86YD1 416 aa4.42□□□□□ -1.7
HOXB3-213ENST00000552000 C4orf33Q8N1A6 199 aa4.42□□□□□ -1.7
HOXB3-213ENST00000552000 GALNT4Q8N4A0 578 aa4.42□□□□□ -1.7
HOXB3-213ENST00000552000 KLHDC1Q8N7A1 406 aa4.42□□□□□ -1.7
HOXB3-213ENST00000552000 OR4S1Q8NGB4 309 aa4.42□□□□□ -1.7
HOXB3-213ENST00000552000 OR6S1Q8NH40 331 aa4.42□□□□□ -1.7
HOXB3-213ENST00000552000 VANGL1Q8TAA9 524 aaPredicted RBP4.42□□□□□ -1.7
HOXB3-213ENST00000552000 C10orf82Q8WW14 230 aa4.42□□□□□ -1.7
HOXB3-213ENST00000552000 MCHR2Q969V1 340 aa4.42□□□□□ -1.7
HOXB3-213ENST00000552000 R3HDM4Q96D70 268 aa4.42□□□□□ -1.7
HOXB3-213ENST00000552000 SLC25A44Q96H78 314 aaPredicted RBP4.42□□□□□ -1.7
HOXB3-213ENST00000552000 RCC1LQ96I51 464 aaKnown RBP4.42□□□□□ -1.7
HOXB3-213ENST00000552000 WDFY2Q96P53 400 aa4.42□□□□□ -1.7
HOXB3-213ENST00000552000 PANX1Q96RD7 426 aa4.42□□□□□ -1.7
HOXB3-213ENST00000552000 WNT5BQ9H1J7 359 aa4.42□□□□□ -1.7
HOXB3-213ENST00000552000 MMP28Q9H239 520 aa4.42□□□□□ -1.7
HOXB3-213ENST00000552000 SEMA6AQ9H2E6 1030 aa4.42□□□□□ -1.7
HOXB3-213ENST00000552000 KCNN2Q9H2S1 579 aa4.42□□□□□ -1.7
HOXB3-213ENST00000552000 PPA2Q9H2U2 334 aa4.42□□□□□ -1.7
HOXB3-213ENST00000552000 SIAEQ9HAT2 523 aa4.42□□□□□ -1.7
HOXB3-213ENST00000552000 ELOVL3Q9HB03 270 aa4.42□□□□□ -1.7
HOXB3-213ENST00000552000 MAN2C1Q9NTJ4 1040 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms