RNA–Protein interactions for RNA: ENST00000551642.1

DEPDC4-210, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-210ENST00000551642 KPNA4O00629 521 aaPredicted RBP5.61□□□□□ -1.51
DEPDC4-210ENST00000551642 CDC42EP2O14613 210 aa5.61□□□□□ -1.51
DEPDC4-210ENST00000551642 CASQ2O14958 399 aaPredicted RBP5.61□□□□□ -1.51
DEPDC4-210ENST00000551642 SMAD9O15198 467 aaKnown RBP5.61□□□□□ -1.51
DEPDC4-210ENST00000551642 CXCL13O43927 109 aa5.61□□□□□ -1.51
DEPDC4-210ENST00000551642 PIP5K1CO60331 668 aa5.61□□□□□ -1.51
DEPDC4-210ENST00000551642 CYTIPO60759 359 aa5.61□□□□□ -1.51
DEPDC4-210ENST00000551642 NDUFS7O75251 213 aa5.61□□□□□ -1.51
DEPDC4-210ENST00000551642 VAMP5O95183 116 aa5.61□□□□□ -1.51
DEPDC4-210ENST00000551642 SYNGR4O95473 234 aa5.61□□□□□ -1.51
DEPDC4-210ENST00000551642 CH25HO95992 272 aa5.61□□□□□ -1.51
DEPDC4-210ENST00000551642 ADAP00813 363 aa5.61□□□□□ -1.51
DEPDC4-210ENST00000551642 IGHV4-31P0DP07 118 aa5.61□□□□□ -1.51
DEPDC4-210ENST00000551642 FCGR2AP12318 317 aa5.61□□□□□ -1.51
DEPDC4-210ENST00000551642 IFI30P13284 250 aa5.61□□□□□ -1.51
DEPDC4-210ENST00000551642 ANXA8P13928 327 aa5.61□□□□□ -1.51
DEPDC4-210ENST00000551642 ZNF23P17027 643 aa5.61□□□□□ -1.51
DEPDC4-210ENST00000551642 FUT1P19526 365 aa5.61□□□□□ -1.51
DEPDC4-210ENST00000551642 PTNP21246 168 aa5.61□□□□□ -1.51
DEPDC4-210ENST00000551642 GSTM3P21266 225 aa5.61□□□□□ -1.51
DEPDC4-210ENST00000551642 FPR3P25089 353 aa5.61□□□□□ -1.51
DEPDC4-210ENST00000551642 GTF2E2P29084 291 aaKnown RBP5.61□□□□□ -1.51
DEPDC4-210ENST00000551642 OR2B6P58173 313 aa5.61□□□□□ -1.51
DEPDC4-210ENST00000551642 ACTG1P63261 375 aa5.61□□□□□ -1.51
DEPDC4-210ENST00000551642 SRYQ05066 204 aa5.61□□□□□ -1.51
DEPDC4-210ENST00000551642 ZP4Q12836 540 aa5.61□□□□□ -1.51
DEPDC4-210ENST00000551642 COX10Q12887 443 aa5.61□□□□□ -1.51
DEPDC4-210ENST00000551642 PPP1R8Q12972 351 aaKnown RBP5.61□□□□□ -1.51
DEPDC4-210ENST00000551642 TSPAN31Q12999 210 aa5.61□□□□□ -1.51
DEPDC4-210ENST00000551642 FHL1Q13642 323 aa5.61□□□□□ -1.51
DEPDC4-210ENST00000551642 OR7A5Q15622 319 aa5.61□□□□□ -1.51
DEPDC4-210ENST00000551642 SGCBQ16585 318 aa5.61□□□□□ -1.51
DEPDC4-210ENST00000551642 ACSF3Q4G176 576 aaPredicted RBP5.61□□□□□ -1.51
DEPDC4-210ENST00000551642 AWAT1Q58HT5 328 aa5.61□□□□□ -1.51
DEPDC4-210ENST00000551642 NSUN5P2Q63ZY6 315 aa5.61□□□□□ -1.51
DEPDC4-210ENST00000551642 PGBD2Q6P3X8 592 aa5.61□□□□□ -1.51
DEPDC4-210ENST00000551642 FAHD1Q6P587 224 aa5.61□□□□□ -1.51
DEPDC4-210ENST00000551642 CHMP1BQ7LBR1 199 aa5.61□□□□□ -1.51
DEPDC4-210ENST00000551642 OVCH2Q7RTZ1 564 aa5.61□□□□□ -1.51
DEPDC4-210ENST00000551642 EPHX4Q8IUS5 362 aa5.61□□□□□ -1.51
DEPDC4-210ENST00000551642 HS3ST5Q8IZT8 346 aa5.61□□□□□ -1.51
DEPDC4-210ENST00000551642 SLC43A2Q8N370 569 aa5.61□□□□□ -1.51
DEPDC4-210ENST00000551642 AQP11Q8NBQ7 271 aa5.61□□□□□ -1.51
DEPDC4-210ENST00000551642 OR10G2Q8NGC3 310 aa5.61□□□□□ -1.51
DEPDC4-210ENST00000551642 OR9Q2Q8NGE9 314 aa5.61□□□□□ -1.51
DEPDC4-210ENST00000551642 GNPDA2Q8TDQ7 276 aa5.61□□□□□ -1.51
DEPDC4-210ENST00000551642 RNF128Q8TEB7 428 aa5.61□□□□□ -1.51
DEPDC4-210ENST00000551642 TMEM171Q8WVE6 324 aa5.61□□□□□ -1.51
DEPDC4-210ENST00000551642 SLC25A36Q96CQ1 311 aa5.61□□□□□ -1.51
DEPDC4-210ENST00000551642 ZHX1-C8orf76Q96EF9 292 aa5.61□□□□□ -1.51
DEPDC4-210ENST00000551642 LRRC46Q96FV0 321 aa5.61□□□□□ -1.51
DEPDC4-210ENST00000551642 ZNF845Q96IR2 970 aaPredicted RBP5.61□□□□□ -1.51
DEPDC4-210ENST00000551642 TNFRSF13CQ96RJ3 184 aa5.61□□□□□ -1.51
DEPDC4-210ENST00000551642 FEVQ99581 238 aa5.61□□□□□ -1.51
DEPDC4-210ENST00000551642 NAA11Q9BSU3 229 aaPredicted RBP5.61□□□□□ -1.51
DEPDC4-210ENST00000551642 SF3B5Q9BWJ5 86 aaKnown RBP5.61□□□□□ -1.51
DEPDC4-210ENST00000551642 SRXN1Q9BYN0 137 aa5.61□□□□□ -1.51
DEPDC4-210ENST00000551642 SEMA6AQ9H2E6 1030 aa5.61□□□□□ -1.51
DEPDC4-210ENST00000551642 RNF122Q9H9V4 155 aa5.61□□□□□ -1.51
DEPDC4-210ENST00000551642 RNPEPL1Q9HAU8 725 aa5.61□□□□□ -1.51
DEPDC4-210ENST00000551642 PDP1Q9P0J1 537 aaPredicted RBP5.61□□□□□ -1.51
DEPDC4-210ENST00000551642 CLCF1Q9UBD9 225 aa5.61□□□□□ -1.51
DEPDC4-210ENST00000551642 ZNF629Q9UEG4 869 aaPredicted RBP5.61□□□□□ -1.51
DEPDC4-210ENST00000551642 MCTS1Q9ULC4 181 aaKnown RBP5.61□□□□□ -1.51
DEPDC4-210ENST00000551642 FRAS1Q86XX4 4008 aa5.61□□□□□ -1.51
DEPDC4-210ENST00000551642 IGKV3D-15A0A087WSY6 115 aa5.6□□□□□ -1.51
DEPDC4-210ENST00000551642 A0A1W2PNV4 684 aa5.6□□□□□ -1.51
DEPDC4-210ENST00000551642 MBD3L3A6NE82 208 aaPredicted RBP5.6□□□□□ -1.51
DEPDC4-210ENST00000551642 NPIPB13A6NJU9 1138 aa5.6□□□□□ -1.51
DEPDC4-210ENST00000551642 SLC22A20A6NK97 555 aa5.6□□□□□ -1.51
DEPDC4-210ENST00000551642 ZNF814B7Z6K7 855 aa5.6□□□□□ -1.51
DEPDC4-210ENST00000551642 FAM157AC9JC47 383 aa5.6□□□□□ -1.51
DEPDC4-210ENST00000551642 NPIPB4C9JG80 1138 aa5.6□□□□□ -1.51
DEPDC4-210ENST00000551642 LRRN3E7EW58 273 aa5.6□□□□□ -1.51
DEPDC4-210ENST00000551642 MS4A18H0YCH9 400 aa5.6□□□□□ -1.51
DEPDC4-210ENST00000551642 PLPP3O14495 311 aa5.6□□□□□ -1.51
DEPDC4-210ENST00000551642 PTP4A3O75365 173 aa5.6□□□□□ -1.51
DEPDC4-210ENST00000551642 AKR7A3O95154 331 aa5.6□□□□□ -1.51
DEPDC4-210ENST00000551642 ATP6V1G2O95670 118 aa5.6□□□□□ -1.51
DEPDC4-210ENST00000551642 BAG2O95816 211 aa5.6□□□□□ -1.51
DEPDC4-210ENST00000551642 HIST1H2ABP04908 130 aa5.6□□□□□ -1.51
DEPDC4-210ENST00000551642 SAGP10523 405 aaPredicted RBP5.6□□□□□ -1.51
DEPDC4-210ENST00000551642 PRKACGP22612 351 aa5.6□□□□□ -1.51
DEPDC4-210ENST00000551642 GRPRP30550 384 aa5.6□□□□□ -1.51
DEPDC4-210ENST00000551642 TIMP3P35625 211 aa5.6□□□□□ -1.51
DEPDC4-210ENST00000551642 GPR4P46093 362 aa5.6□□□□□ -1.51
DEPDC4-210ENST00000551642 DAPP51397 102 aa5.6□□□□□ -1.51
DEPDC4-210ENST00000551642 P2RY4P51582 365 aa5.6□□□□□ -1.51
DEPDC4-210ENST00000551642 PRPS1P60891 318 aa5.6□□□□□ -1.51
DEPDC4-210ENST00000551642 SLC34A1Q06495 639 aa5.6□□□□□ -1.51
DEPDC4-210ENST00000551642 PDK3Q15120 406 aa5.6□□□□□ -1.51
DEPDC4-210ENST00000551642 PON3Q15166 354 aa5.6□□□□□ -1.51
DEPDC4-210ENST00000551642 RNPS1Q15287 305 aaKnown RBP5.6□□□□□ -1.51
DEPDC4-210ENST00000551642 TAF11Q15544 211 aa5.6□□□□□ -1.51
DEPDC4-210ENST00000551642 ETFDHQ16134 617 aa5.6□□□□□ -1.51
DEPDC4-210ENST00000551642 MS4A18Q3C1V0 323 aa5.6□□□□□ -1.51
DEPDC4-210ENST00000551642 ZBED5Q49AG3 693 aa5.6□□□□□ -1.51
DEPDC4-210ENST00000551642 C4orf46Q504U0 113 aa5.6□□□□□ -1.51
DEPDC4-210ENST00000551642 RNASE12Q5GAN4 147 aaKnown RBP5.6□□□□□ -1.51
DEPDC4-210ENST00000551642 OTUD3Q5T2D3 398 aaPredicted RBP5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms