RNA–Protein interactions for RNA: ENST00000551634.5

NPAS3-211, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 5

Gene NPAS3, Length 2,718 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-211ENST00000551634 UCK1Q9HA47 277 aa21.19■□□□□ 0.98
NPAS3-211ENST00000551634 IFT46Q9NQC8 304 aa21.19■□□□□ 0.98
NPAS3-211ENST00000551634 TAS2R3Q9NYW6 316 aa21.19■□□□□ 0.98
NPAS3-211ENST00000551634 FBXO4Q9UKT5 387 aa21.19■□□□□ 0.98
NPAS3-211ENST00000551634 FARSAQ9Y285 508 aaKnown RBP21.19■□□□□ 0.98
NPAS3-211ENST00000551634 TMED7Q9Y3B3 224 aa21.19■□□□□ 0.98
NPAS3-211ENST00000551634 PIAS3Q9Y6X2 628 aa21.19■□□□□ 0.98
NPAS3-211ENST00000551634 MPTX1A8MV57 137 aa21.18■□□□□ 0.98
NPAS3-211ENST00000551634 PLPP3O14495 311 aa21.18■□□□□ 0.98
NPAS3-211ENST00000551634 ZNF28P17035 718 aa21.18■□□□□ 0.98
NPAS3-211ENST00000551634 CNR1P21554 472 aa21.18■□□□□ 0.98
NPAS3-211ENST00000551634 C1orf140Q5VVS0 124 aa21.18■□□□□ 0.98
NPAS3-211ENST00000551634 DNAJA3Q96EY1 480 aa21.18■□□□□ 0.98
NPAS3-211ENST00000551634 VRK1Q99986 396 aaPredicted RBP21.18■□□□□ 0.98
NPAS3-211ENST00000551634 LRRC61Q9BV99 259 aa21.18■□□□□ 0.98
NPAS3-211ENST00000551634 TBL1XR1Q9BZK7 514 aa21.18■□□□□ 0.98
NPAS3-211ENST00000551634 WDR13Q9H1Z4 485 aa21.18■□□□□ 0.98
NPAS3-211ENST00000551634 RAB22AQ9UL26 194 aa21.18■□□□□ 0.98
NPAS3-211ENST00000551634 IGKV3D-11A0A0A0MRZ8 115 aa21.18■□□□□ 0.98
NPAS3-211ENST00000551634 TO15178 435 aa21.18■□□□□ 0.98
NPAS3-211ENST00000551634 MOGAT2Q3SYC2 334 aa21.18■□□□□ 0.98
NPAS3-211ENST00000551634 RNASE10Q5GAN6 216 aaKnown RBP21.18■□□□□ 0.98
NPAS3-211ENST00000551634 TMEM244Q5VVB8 128 aa21.18■□□□□ 0.98
NPAS3-211ENST00000551634 LRFN4Q6PJG9 635 aa21.18■□□□□ 0.98
NPAS3-211ENST00000551634 MDGA2Q7Z553 956 aa21.18■□□□□ 0.98
NPAS3-211ENST00000551634 FAM174AQ8TBP5 190 aa21.18■□□□□ 0.98
NPAS3-211ENST00000551634 GAL3ST1Q99999 423 aa21.18■□□□□ 0.98
NPAS3-211ENST00000551634 CHRNA10Q9GZZ6 450 aa21.18■□□□□ 0.98
NPAS3-211ENST00000551634 PDE7BQ9NP56 450 aa21.18■□□□□ 0.98
NPAS3-211ENST00000551634 SOHLH2Q9NX45 425 aa21.18■□□□□ 0.98
NPAS3-211ENST00000551634 IL2RAP01589 272 aa21.17■□□□□ 0.98
NPAS3-211ENST00000551634 SPOCK1Q08629 439 aa21.17■□□□□ 0.98
NPAS3-211ENST00000551634 EBPQ15125 230 aaKnown RBP21.17■□□□□ 0.98
NPAS3-211ENST00000551634 TAF13Q15543 124 aa21.17■□□□□ 0.98
NPAS3-211ENST00000551634 ATRAIDQ6UW56 229 aa21.17■□□□□ 0.98
NPAS3-211ENST00000551634 C5orf46Q6UWT4 87 aa21.17■□□□□ 0.98
NPAS3-211ENST00000551634 CCDC36Q8IYA8 594 aa21.17■□□□□ 0.98
NPAS3-211ENST00000551634 B3GNT4Q9C0J1 378 aa21.17■□□□□ 0.98
NPAS3-211ENST00000551634 SLC6A15Q9H2J7 730 aa21.17■□□□□ 0.98
NPAS3-211ENST00000551634 G6PC2Q9NQR9 355 aa21.17■□□□□ 0.98
NPAS3-211ENST00000551634 OR52A1Q9UKL2 312 aa21.17■□□□□ 0.98
NPAS3-211ENST00000551634 VSIG4Q9Y279 399 aa21.17■□□□□ 0.98
NPAS3-211ENST00000551634 EMC9Q9Y3B6 208 aa21.17■□□□□ 0.98
NPAS3-211ENST00000551634 TDRD6O60522 2096 aaKnown RBP21.17■□□□□ 0.98
NPAS3-211ENST00000551634 LOC107986453A0A1B0GWG9 222 aa21.17■□□□□ 0.98
NPAS3-211ENST00000551634 TMEM235A6NFC5 223 aa21.17■□□□□ 0.98
NPAS3-211ENST00000551634 DNASE2O00115 360 aaPredicted RBP21.17■□□□□ 0.98
NPAS3-211ENST00000551634 LUMP51884 338 aaPredicted RBP21.17■□□□□ 0.98
NPAS3-211ENST00000551634 ELAVL1Q15717 326 aaKnown RBP21.17■□□□□ 0.98
NPAS3-211ENST00000551634 KIF26BQ2KJY2 2108 aa21.17■□□□□ 0.98
NPAS3-211ENST00000551634 FAHD2BQ6P2I3 314 aaPredicted RBP21.17■□□□□ 0.98
NPAS3-211ENST00000551634 DEGS2Q6QHC5 323 aa21.17■□□□□ 0.98
NPAS3-211ENST00000551634 FAHD2AQ96GK7 314 aa21.17■□□□□ 0.98
NPAS3-211ENST00000551634 GDF2Q9UK05 429 aaPredicted RBP21.17■□□□□ 0.98
NPAS3-211ENST00000551634 MMP17Q9ULZ9 603 aa21.17■□□□□ 0.98
NPAS3-211ENST00000551634 COA3Q9Y2R0 106 aaPredicted RBP21.17■□□□□ 0.98
NPAS3-211ENST00000551634 CPAMD8Q8IZJ3 1885 aa21.16■□□□□ 0.98
NPAS3-211ENST00000551634 RNF222A6NCQ9 220 aa21.16■□□□□ 0.98
NPAS3-211ENST00000551634 LILRA5A6NI73 299 aa21.16■□□□□ 0.98
NPAS3-211ENST00000551634 NUPL2O15504 423 aaKnown RBP21.16■□□□□ 0.98
NPAS3-211ENST00000551634 OR2T1O43869 369 aa21.16■□□□□ 0.98
NPAS3-211ENST00000551634 HYAL1Q12794 435 aa21.16■□□□□ 0.98
NPAS3-211ENST00000551634 ZNF260Q3ZCT1 412 aa21.16■□□□□ 0.98
NPAS3-211ENST00000551634 HLA-DQA1Q5Y7H0 255 aa21.16■□□□□ 0.98
NPAS3-211ENST00000551634 MITD1Q8WV92 249 aa21.16■□□□□ 0.98
NPAS3-211ENST00000551634 TSLPQ969D9 159 aa21.16■□□□□ 0.98
NPAS3-211ENST00000551634 ZMAT3Q9HA38 289 aaKnown RBP21.16■□□□□ 0.98
NPAS3-211ENST00000551634 RHBDD3Q9Y3P4 386 aa21.16■□□□□ 0.98
NPAS3-211ENST00000551634 GP1BAP07359 652 aa21.16■□□□□ 0.98
NPAS3-211ENST00000551634 CXADRP78310 365 aa21.16■□□□□ 0.98
NPAS3-211ENST00000551634 PAN3Q58A45 887 aaKnown RBP21.16■□□□□ 0.98
NPAS3-211ENST00000551634 FAM74A1Q5RGS3 127 aa21.16■□□□□ 0.98
NPAS3-211ENST00000551634 GRINAQ7Z429 371 aa21.16■□□□□ 0.98
NPAS3-211ENST00000551634 PPP1R1CQ8WVI7 109 aa21.16■□□□□ 0.98
NPAS3-211ENST00000551634 LDHAL6BQ9BYZ2 381 aaPredicted RBP21.16■□□□□ 0.98
NPAS3-211ENST00000551634 CPED1A4D0V7 1026 aa21.15■□□□□ 0.98
NPAS3-211ENST00000551634 EIF1AYO14602 144 aaKnown RBP21.15■□□□□ 0.98
NPAS3-211ENST00000551634 ZNF823P16415 610 aa21.15■□□□□ 0.98
NPAS3-211ENST00000551634 DLSTP36957 453 aa21.15■□□□□ 0.98
NPAS3-211ENST00000551634 EIF1AXP47813 144 aaKnown RBP21.15■□□□□ 0.98
NPAS3-211ENST00000551634 SLC26A5P58743 744 aa21.15■□□□□ 0.98
NPAS3-211ENST00000551634 ZNF169Q14929 603 aaPredicted RBP21.15■□□□□ 0.98
NPAS3-211ENST00000551634 PCK2Q16822 640 aa21.15■□□□□ 0.98
NPAS3-211ENST00000551634 OR10K2Q6IF99 312 aa21.15■□□□□ 0.98
NPAS3-211ENST00000551634 UQCC3Q6UW78 93 aa21.15■□□□□ 0.98
NPAS3-211ENST00000551634 OR5T2Q8NGG2 359 aa21.15■□□□□ 0.98
NPAS3-211ENST00000551634 LRRC46Q96FV0 321 aa21.15■□□□□ 0.98
NPAS3-211ENST00000551634 ZNF471Q9BX82 626 aaPredicted RBP21.15■□□□□ 0.98
NPAS3-211ENST00000551634 PIGMQ9H3S5 423 aa21.15■□□□□ 0.98
NPAS3-211ENST00000551634 AHSA1O95433 338 aa21.15■□□□□ 0.98
NPAS3-211ENST00000551634 NR0B1P51843 470 aaKnown RBP21.15■□□□□ 0.98
NPAS3-211ENST00000551634 PNLIPRP2P54317 469 aa21.15■□□□□ 0.98
NPAS3-211ENST00000551634 DNM1P34Q6PK57 102 aa21.15■□□□□ 0.98
NPAS3-211ENST00000551634 C17orf107Q6ZR85 190 aa21.15■□□□□ 0.98
NPAS3-211ENST00000551634 KLHDC7BQ96G42 594 aa21.15■□□□□ 0.98
NPAS3-211ENST00000551634 TLCD2A6NGC4 264 aa21.14■□□□□ 0.98
NPAS3-211ENST00000551634 A6NIZ1 184 aa21.14■□□□□ 0.98
NPAS3-211ENST00000551634 RAB27BO00194 218 aa21.14■□□□□ 0.98
NPAS3-211ENST00000551634 RAP1BP61224 184 aa21.14■□□□□ 0.98
NPAS3-211ENST00000551634 RAP1AP62834 184 aa21.14■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms