RNA–Protein interactions for RNA: ENST00000550914.6

PTCH1-221, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-221ENST00000550914 SCG5P05408 212 aa10.8□□□□□ -0.68
PTCH1-221ENST00000550914 CD14P08571 375 aa10.8□□□□□ -0.68
PTCH1-221ENST00000550914 RAC2P15153 192 aa10.8□□□□□ -0.68
PTCH1-221ENST00000550914 MTNR1AP48039 350 aa10.8□□□□□ -0.68
PTCH1-221ENST00000550914 RGS6P49758 472 aa10.8□□□□□ -0.68
PTCH1-221ENST00000550914 SEC61A1P61619 476 aaKnown RBP10.8□□□□□ -0.68
PTCH1-221ENST00000550914 GUCY1A3Q02108 690 aa10.8□□□□□ -0.68
PTCH1-221ENST00000550914 BAMBIQ13145 260 aa10.8□□□□□ -0.68
PTCH1-221ENST00000550914 AQP6Q13520 282 aa10.8□□□□□ -0.68
PTCH1-221ENST00000550914 TRAM2Q15035 370 aa10.8□□□□□ -0.68
PTCH1-221ENST00000550914 MAPRE2Q15555 327 aa10.8□□□□□ -0.68
PTCH1-221ENST00000550914 VASH1Q7L8A9 365 aaPredicted RBP10.8□□□□□ -0.68
PTCH1-221ENST00000550914 PCYOX1LQ8NBM8 494 aa10.8□□□□□ -0.68
PTCH1-221ENST00000550914 OR2T12Q8NG77 320 aa10.8□□□□□ -0.68
PTCH1-221ENST00000550914 ITLN1Q8WWA0 313 aa10.8□□□□□ -0.68
PTCH1-221ENST00000550914 ACOT11Q8WXI4 607 aaPredicted RBP10.8□□□□□ -0.68
PTCH1-221ENST00000550914 CMBLQ96DG6 245 aa10.8□□□□□ -0.68
PTCH1-221ENST00000550914 TPD52L3Q96J77 140 aa10.8□□□□□ -0.68
PTCH1-221ENST00000550914 OR2V2Q96R30 315 aa10.8□□□□□ -0.68
PTCH1-221ENST00000550914 FNDC11Q9BVV2 318 aa10.8□□□□□ -0.68
PTCH1-221ENST00000550914 NDEL1Q9GZM8 345 aa10.8□□□□□ -0.68
PTCH1-221ENST00000550914 POFUT1Q9H488 388 aa10.8□□□□□ -0.68
PTCH1-221ENST00000550914 GCM1Q9NP62 436 aa10.8□□□□□ -0.68
PTCH1-221ENST00000550914 EMC7Q9NPA0 242 aa10.8□□□□□ -0.68
PTCH1-221ENST00000550914 GID8Q9NWU2 228 aa10.8□□□□□ -0.68
PTCH1-221ENST00000550914 GRHPRQ9UBQ7 328 aa10.8□□□□□ -0.68
PTCH1-221ENST00000550914 AP3M1Q9Y2T2 418 aa10.8□□□□□ -0.68
PTCH1-221ENST00000550914 STARD10Q9Y365 291 aa10.8□□□□□ -0.68
PTCH1-221ENST00000550914 TEX13CA0A0J9YWL9 993 aa10.79□□□□□ -0.68
PTCH1-221ENST00000550914 ELOVL7A1L3X0 281 aa10.79□□□□□ -0.68
PTCH1-221ENST00000550914 PRSS37A4D1T9 235 aa10.79□□□□□ -0.68
PTCH1-221ENST00000550914 OR6C6A6NF89 314 aa10.79□□□□□ -0.68
PTCH1-221ENST00000550914 CEACAM18A8MTB9 384 aa10.79□□□□□ -0.68
PTCH1-221ENST00000550914 WNT2P09544 360 aa10.79□□□□□ -0.68
PTCH1-221ENST00000550914 MMP16P51512 607 aa10.79□□□□□ -0.68
PTCH1-221ENST00000550914 LSM6P62312 80 aaKnown RBP10.79□□□□□ -0.68
PTCH1-221ENST00000550914 PAX2Q02962 417 aa10.79□□□□□ -0.68
PTCH1-221ENST00000550914 LRRN1Q6UXK5 716 aa10.79□□□□□ -0.68
PTCH1-221ENST00000550914 FBXW12Q6X9E4 464 aa10.79□□□□□ -0.68
PTCH1-221ENST00000550914 TMPRSS11FQ6ZWK6 438 aa10.79□□□□□ -0.68
PTCH1-221ENST00000550914 FAM122BQ7Z309 247 aa10.79□□□□□ -0.68
PTCH1-221ENST00000550914 MICU2Q8IYU8 434 aa10.79□□□□□ -0.68
PTCH1-221ENST00000550914 BCL6BQ8N143 479 aaPredicted RBP10.79□□□□□ -0.68
PTCH1-221ENST00000550914 OR52E2Q8NGJ4 325 aa10.79□□□□□ -0.68
PTCH1-221ENST00000550914 OR5L1Q8NGL2 311 aa10.79□□□□□ -0.68
PTCH1-221ENST00000550914 ZNF48Q96MX3 618 aaPredicted RBP10.79□□□□□ -0.68
PTCH1-221ENST00000550914 MS4A7Q9GZW8 240 aaPredicted RBP10.79□□□□□ -0.68
PTCH1-221ENST00000550914 SLITRK2Q9H156 845 aa10.79□□□□□ -0.68
PTCH1-221ENST00000550914 UNKLQ9H9P5 680 aaKnown RBP10.79□□□□□ -0.68
PTCH1-221ENST00000550914 MIOXQ9UGB7 285 aa10.79□□□□□ -0.68
PTCH1-221ENST00000550914 A0A087WUU8 490 aa10.78□□□□□ -0.68
PTCH1-221ENST00000550914 H7C1C5 153 aa10.78□□□□□ -0.68
PTCH1-221ENST00000550914 FFAR1O14842 300 aa10.78□□□□□ -0.68
PTCH1-221ENST00000550914 CD80P33681 288 aa10.78□□□□□ -0.68
PTCH1-221ENST00000550914 RPL4P36578 427 aaKnown RBP10.78□□□□□ -0.68
PTCH1-221ENST00000550914 LCN6P62502 163 aa10.78□□□□□ -0.68
PTCH1-221ENST00000550914 KLF10Q13118 480 aa10.78□□□□□ -0.68
PTCH1-221ENST00000550914 SLC9A3R2Q15599 337 aa10.78□□□□□ -0.68
PTCH1-221ENST00000550914 ZNF181Q2M3W8 571 aa10.78□□□□□ -0.68
PTCH1-221ENST00000550914 ZBED5Q49AG3 693 aa10.78□□□□□ -0.68
PTCH1-221ENST00000550914 MESTQ5EB52 335 aa10.78□□□□□ -0.68
PTCH1-221ENST00000550914 LEG1Q6P5S2 330 aa10.78□□□□□ -0.68
PTCH1-221ENST00000550914 BTNL3Q6UXE8 466 aa10.78□□□□□ -0.68
PTCH1-221ENST00000550914 MBOAT2Q6ZWT7 520 aa10.78□□□□□ -0.68
PTCH1-221ENST00000550914 PARP8Q8N3A8 854 aa10.78□□□□□ -0.68
PTCH1-221ENST00000550914 OR8G5Q8NG78 346 aa10.78□□□□□ -0.68
PTCH1-221ENST00000550914 OR13C2Q8NGS9 318 aa10.78□□□□□ -0.68
PTCH1-221ENST00000550914 OR13G1Q8NGZ3 307 aa10.78□□□□□ -0.68
PTCH1-221ENST00000550914 UPRTQ96BW1 309 aa10.78□□□□□ -0.68
PTCH1-221ENST00000550914 RASD2Q96D21 266 aa10.78□□□□□ -0.68
PTCH1-221ENST00000550914 PLEKHA8Q96JA3 519 aa10.78□□□□□ -0.68
PTCH1-221ENST00000550914 ZNF570Q96NI8 536 aa10.78□□□□□ -0.68
PTCH1-221ENST00000550914 DUX5Q96PT3 197 aa10.78□□□□□ -0.68
PTCH1-221ENST00000550914 SSBP3Q9BWW4 388 aaPredicted RBP10.78□□□□□ -0.68
PTCH1-221ENST00000550914 TMEM120AQ9BXJ8 343 aa10.78□□□□□ -0.68
PTCH1-221ENST00000550914 ANKRD19PQ9H560 264 aa10.78□□□□□ -0.68
PTCH1-221ENST00000550914 TMEM5Q9Y2B1 443 aa10.78□□□□□ -0.68
PTCH1-221ENST00000550914 ADAM18Q9Y3Q7 739 aa10.78□□□□□ -0.68
PTCH1-221ENST00000550914 IGHV2-70DA0A0C4DH43 119 aa10.77□□□□□ -0.69
PTCH1-221ENST00000550914 CDC42EP2O14613 210 aa10.77□□□□□ -0.69
PTCH1-221ENST00000550914 PLATP00750 562 aa10.77□□□□□ -0.69
PTCH1-221ENST00000550914 CTLA4P16410 223 aa10.77□□□□□ -0.69
PTCH1-221ENST00000550914 FUT4P22083 530 aa10.77□□□□□ -0.69
PTCH1-221ENST00000550914 SDHAP31040 664 aa10.77□□□□□ -0.69
PTCH1-221ENST00000550914 SRP9P49458 86 aaKnown RBP10.77□□□□□ -0.69
PTCH1-221ENST00000550914 HNRNPA0Q13151 305 aaKnown RBP10.77□□□□□ -0.69
PTCH1-221ENST00000550914 KCNMB1Q16558 191 aa10.77□□□□□ -0.69
PTCH1-221ENST00000550914 GPR139Q6DWJ6 353 aa10.77□□□□□ -0.69
PTCH1-221ENST00000550914 TREML4Q6UXN2 200 aa10.77□□□□□ -0.69
PTCH1-221ENST00000550914 ZNF730Q6ZMV8 503 aa10.77□□□□□ -0.69
PTCH1-221ENST00000550914 ARPINQ7Z6K5 226 aa10.77□□□□□ -0.69
PTCH1-221ENST00000550914 VTCN1Q7Z7D3 282 aa10.77□□□□□ -0.69
PTCH1-221ENST00000550914 ADCK1Q86TW2 530 aa10.77□□□□□ -0.69
PTCH1-221ENST00000550914 KLBQ86Z14 1044 aa10.77□□□□□ -0.69
PTCH1-221ENST00000550914 GLB1L2Q8IW92 636 aa10.77□□□□□ -0.69
PTCH1-221ENST00000550914 OR1F12Q8NHA8 337 aa10.77□□□□□ -0.69
PTCH1-221ENST00000550914 RAB40AQ8WXH6 277 aa10.77□□□□□ -0.69
PTCH1-221ENST00000550914 DACT3Q96B18 629 aaPredicted RBP10.77□□□□□ -0.69
PTCH1-221ENST00000550914 MEGF10Q96KG7 1140 aa10.77□□□□□ -0.69
PTCH1-221ENST00000550914 Q96M85 177 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms