RNA–Protein interactions for RNA: ENST00000550872.1

CHMP1A-209, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-209ENST00000550872 LAMP3Q9UQV4 416 aa14.02□□□□□ -0.17
CHMP1A-209ENST00000550872 USF3Q68DE3 2245 aa14.02□□□□□ -0.17
CHMP1A-209ENST00000550872 DCHS2Q6V1P9 2916 aa14.01□□□□□ -0.17
CHMP1A-209ENST00000550872 CCDC168Q8NDH2 2452 aa14.01□□□□□ -0.17
CHMP1A-209ENST00000550872 SYNGR3O43761 229 aa14.01□□□□□ -0.17
CHMP1A-209ENST00000550872 SOD3P08294 240 aa14.01□□□□□ -0.17
CHMP1A-209ENST00000550872 DANCRP0C864 163 aa14.01□□□□□ -0.17
CHMP1A-209ENST00000550872 FAM157BP0CG42 384 aa14.01□□□□□ -0.17
CHMP1A-209ENST00000550872 SLC2A5P22732 501 aa14.01□□□□□ -0.17
CHMP1A-209ENST00000550872 PEX2P28328 305 aa14.01□□□□□ -0.17
CHMP1A-209ENST00000550872 THBS4P35443 961 aa14.01□□□□□ -0.17
CHMP1A-209ENST00000550872 NKX6-1P78426 367 aaPredicted RBP14.01□□□□□ -0.17
CHMP1A-209ENST00000550872 TEX30Q5JUR7 227 aa14.01□□□□□ -0.17
CHMP1A-209ENST00000550872 AGAP6Q5VW22 663 aa14.01□□□□□ -0.17
CHMP1A-209ENST00000550872 CFAP77Q6ZQR2 320 aa14.01□□□□□ -0.17
CHMP1A-209ENST00000550872 MUC15Q8N387 334 aa14.01□□□□□ -0.17
CHMP1A-209ENST00000550872 OR8J1Q8NGP2 316 aa14.01□□□□□ -0.17
CHMP1A-209ENST00000550872 FAM81AQ8TBF8 368 aa14.01□□□□□ -0.17
CHMP1A-209ENST00000550872 TMEM171Q8WVE6 324 aa14.01□□□□□ -0.17
CHMP1A-209ENST00000550872 NINJ1Q92982 152 aa14.01□□□□□ -0.17
CHMP1A-209ENST00000550872 PIGTQ969N2 578 aa14.01□□□□□ -0.17
CHMP1A-209ENST00000550872 TEAD3Q99594 435 aa14.01□□□□□ -0.17
CHMP1A-209ENST00000550872 HDHD2Q9H0R4 259 aa14.01□□□□□ -0.17
CHMP1A-209ENST00000550872 OR51B6Q9H340 312 aa14.01□□□□□ -0.17
CHMP1A-209ENST00000550872 ZNF442Q9H7R0 627 aa14.01□□□□□ -0.17
CHMP1A-209ENST00000550872 MARCH7Q9H992 704 aa14.01□□□□□ -0.17
CHMP1A-209ENST00000550872 C8orf4Q9NR00 106 aa14.01□□□□□ -0.17
CHMP1A-209ENST00000550872 IMPAD1Q9NX62 359 aa14.01□□□□□ -0.17
CHMP1A-209ENST00000550872 ARID1AO14497 2285 aa14.01□□□□□ -0.17
CHMP1A-209ENST00000550872 OR6C6A6NF89 314 aa14□□□□□ -0.17
CHMP1A-209ENST00000550872 CASQ2O14958 399 aaPredicted RBP14□□□□□ -0.17
CHMP1A-209ENST00000550872 GPRIN2O60269 458 aa14□□□□□ -0.17
CHMP1A-209ENST00000550872 LCKP06239 509 aa14□□□□□ -0.17
CHMP1A-209ENST00000550872 OR4A8P0C604 315 aa14□□□□□ -0.17
CHMP1A-209ENST00000550872 PCSK6P29122 969 aa14□□□□□ -0.17
CHMP1A-209ENST00000550872 GLRXP35754 106 aa14□□□□□ -0.17
CHMP1A-209ENST00000550872 RAD52P43351 418 aa14□□□□□ -0.17
CHMP1A-209ENST00000550872 UCP2P55851 309 aa14□□□□□ -0.17
CHMP1A-209ENST00000550872 RPS23P62266 143 aaKnown RBP14□□□□□ -0.17
CHMP1A-209ENST00000550872 SLC34A1Q06495 639 aa14□□□□□ -0.17
CHMP1A-209ENST00000550872 PCK2Q16822 640 aa14□□□□□ -0.17
CHMP1A-209ENST00000550872 LCN1P1Q5VSP4 162 aa14□□□□□ -0.17
CHMP1A-209ENST00000550872 AADACL4Q5VUY2 407 aa14□□□□□ -0.17
CHMP1A-209ENST00000550872 NXNL2Q5VZ03 156 aa14□□□□□ -0.17
CHMP1A-209ENST00000550872 MEPCEQ7L2J0 689 aaKnown RBP14□□□□□ -0.17
CHMP1A-209ENST00000550872 SHFQ7M4L6 423 aa14□□□□□ -0.17
CHMP1A-209ENST00000550872 DPY19L4Q7Z388 723 aa14□□□□□ -0.17
CHMP1A-209ENST00000550872 DCXRQ7Z4W1 244 aa14□□□□□ -0.17
CHMP1A-209ENST00000550872 TIGD4Q8IY51 512 aa14□□□□□ -0.17
CHMP1A-209ENST00000550872 PACRGLQ8N7B6 248 aa14□□□□□ -0.17
CHMP1A-209ENST00000550872 SLC7A6Q92536 515 aa14□□□□□ -0.17
CHMP1A-209ENST00000550872 MAP6Q96JE9 813 aa14□□□□□ -0.17
CHMP1A-209ENST00000550872 RNPEPL1Q9HAU8 725 aa14□□□□□ -0.17
CHMP1A-209ENST00000550872 CBLN4Q9NTU7 201 aa14□□□□□ -0.17
CHMP1A-209ENST00000550872 FAM118AQ9NWS6 357 aa14□□□□□ -0.17
CHMP1A-209ENST00000550872 SMPD3Q9NY59 655 aaPredicted RBP14□□□□□ -0.17
CHMP1A-209ENST00000550872 ATPIF1Q9UII2 106 aa14□□□□□ -0.17
CHMP1A-209ENST00000550872 GRIP1Q9Y3R0 1128 aa14□□□□□ -0.17
CHMP1A-209ENST00000550872 CMAHPQ9Y471 501 aa14□□□□□ -0.17
CHMP1A-209ENST00000550872 GMPPBQ9Y5P6 360 aa14□□□□□ -0.17
CHMP1A-209ENST00000550872 HRNRQ86YZ3 2850 aaPredicted RBP14□□□□□ -0.17
CHMP1A-209ENST00000550872 CCDC182A6NF36 153 aa13.99□□□□□ -0.17
CHMP1A-209ENST00000550872 E9PQ18 207 aa13.99□□□□□ -0.17
CHMP1A-209ENST00000550872 SELENOFO60613 162 aa13.99□□□□□ -0.17
CHMP1A-209ENST00000550872 CD8AP01732 235 aa13.99□□□□□ -0.17
CHMP1A-209ENST00000550872 PSKH1P11801 424 aa13.99□□□□□ -0.17
CHMP1A-209ENST00000550872 SERPINF1P36955 418 aa13.99□□□□□ -0.17
CHMP1A-209ENST00000550872 WNT5AP41221 380 aa13.99□□□□□ -0.17
CHMP1A-209ENST00000550872 ECH1Q13011 328 aa13.99□□□□□ -0.17
CHMP1A-209ENST00000550872 EIF2B1Q14232 305 aaKnown RBP13.99□□□□□ -0.17
CHMP1A-209ENST00000550872 ADIPOQQ15848 244 aa13.99□□□□□ -0.17
CHMP1A-209ENST00000550872 OGFRL1Q5TC84 451 aaPredicted RBP13.99□□□□□ -0.17
CHMP1A-209ENST00000550872 ARL9Q6T311 187 aa13.99□□□□□ -0.17
CHMP1A-209ENST00000550872 UNQ6126/PRO20091Q6UXV3 157 aa13.99□□□□□ -0.17
CHMP1A-209ENST00000550872 DTX2Q86UW9 622 aa13.99□□□□□ -0.17
CHMP1A-209ENST00000550872 GID4Q8IVV7 300 aa13.99□□□□□ -0.17
CHMP1A-209ENST00000550872 ZNF555Q8NEP9 628 aa13.99□□□□□ -0.17
CHMP1A-209ENST00000550872 TRUB1Q8WWH5 349 aaKnown RBP13.99□□□□□ -0.17
CHMP1A-209ENST00000550872 UBE2FQ969M7 185 aa13.99□□□□□ -0.17
CHMP1A-209ENST00000550872 C4orf45Q96LM5 186 aa13.99□□□□□ -0.17
CHMP1A-209ENST00000550872 RDH12Q96NR8 316 aa13.99□□□□□ -0.17
CHMP1A-209ENST00000550872 COQ7Q99807 217 aa13.99□□□□□ -0.17
CHMP1A-209ENST00000550872 TRAF4Q9BUZ4 470 aaPredicted RBP13.99□□□□□ -0.17
CHMP1A-209ENST00000550872 BCL2L14Q9BZR8 327 aa13.99□□□□□ -0.17
CHMP1A-209ENST00000550872 ELOVL3Q9HB03 270 aa13.99□□□□□ -0.17
CHMP1A-209ENST00000550872 CENPMQ9NSP4 180 aa13.99□□□□□ -0.17
CHMP1A-209ENST00000550872 ITGB1BP2Q9UKP3 347 aa13.99□□□□□ -0.17
CHMP1A-209ENST00000550872 LOC100130705A0A1B0GUX0 176 aa13.98□□□□□ -0.17
CHMP1A-209ENST00000550872 ABHD16AO95870 558 aa13.98□□□□□ -0.17
CHMP1A-209ENST00000550872 DBHP09172 617 aa13.98□□□□□ -0.17
CHMP1A-209ENST00000550872 NAA10P41227 235 aaPredicted RBP13.98□□□□□ -0.17
CHMP1A-209ENST00000550872 DEFB113Q30KQ7 82 aa13.98□□□□□ -0.17
CHMP1A-209ENST00000550872 RGS7BPQ6MZT1 257 aaPredicted RBP13.98□□□□□ -0.17
CHMP1A-209ENST00000550872 ZNF101Q8IZC7 436 aa13.98□□□□□ -0.17
CHMP1A-209ENST00000550872 OR10S1Q8NGN2 331 aa13.98□□□□□ -0.17
CHMP1A-209ENST00000550872 OR1J1Q8NGS3 322 aa13.98□□□□□ -0.17
CHMP1A-209ENST00000550872 DCLRE1CQ96SD1 692 aaKnown RBP13.98□□□□□ -0.17
CHMP1A-209ENST00000550872 ATF6BQ99941 703 aa13.98□□□□□ -0.17
CHMP1A-209ENST00000550872 CXorf56Q9H5V9 222 aa13.98□□□□□ -0.17
CHMP1A-209ENST00000550872 PNRC2Q9NPJ4 139 aaKnown RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms