RNA–Protein interactions for RNA: ENST00000550611.1

LIMA1-206, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-206ENST00000550611 ARF1P84077 181 aaKnown RBP2.98□□□□□ -1.93
LIMA1-206ENST00000550611 ROR2Q01974 943 aaKnown RBP2.98□□□□□ -1.93
LIMA1-206ENST00000550611 C2orf54Q08AI8 447 aa2.98□□□□□ -1.93
LIMA1-206ENST00000550611 FUT5Q11128 374 aa2.98□□□□□ -1.93
LIMA1-206ENST00000550611 ZP4Q12836 540 aa2.98□□□□□ -1.93
LIMA1-206ENST00000550611 CEACAM7Q14002 265 aa2.98□□□□□ -1.93
LIMA1-206ENST00000550611 ZSCAN26Q16670 478 aa2.98□□□□□ -1.93
LIMA1-206ENST00000550611 MMEL1Q495T6 779 aa2.98□□□□□ -1.93
LIMA1-206ENST00000550611 ALG10Q5BKT4 473 aa2.98□□□□□ -1.93
LIMA1-206ENST00000550611 ALG10BQ5I7T1 473 aa2.98□□□□□ -1.93
LIMA1-206ENST00000550611 KLF17Q5JT82 389 aaPredicted RBP2.98□□□□□ -1.93
LIMA1-206ENST00000550611 TYW3Q6IPR3 259 aaKnown RBP2.98□□□□□ -1.93
LIMA1-206ENST00000550611 SHQ1Q6PI26 577 aaKnown RBP2.98□□□□□ -1.93
LIMA1-206ENST00000550611 ZYG11AQ6WRX3 759 aa2.98□□□□□ -1.93
LIMA1-206ENST00000550611 FRRS1Q6ZNA5 592 aa2.98□□□□□ -1.93
LIMA1-206ENST00000550611 MOB3CQ70IA8 216 aa2.98□□□□□ -1.93
LIMA1-206ENST00000550611 SZRD1Q7Z422 152 aa2.98□□□□□ -1.93
LIMA1-206ENST00000550611 C6orf120Q7Z4R8 191 aa2.98□□□□□ -1.93
LIMA1-206ENST00000550611 IGFN1Q86VF2 1251 aa2.98□□□□□ -1.93
LIMA1-206ENST00000550611 LRP11Q86VZ4 500 aa2.98□□□□□ -1.93
LIMA1-206ENST00000550611 CCDC36Q8IYA8 594 aa2.98□□□□□ -1.93
LIMA1-206ENST00000550611 DPP10Q8N608 796 aa2.98□□□□□ -1.93
LIMA1-206ENST00000550611 NATD1Q8N6N6 113 aa2.98□□□□□ -1.93
LIMA1-206ENST00000550611 TMCO5AQ8N6Q1 288 aa2.98□□□□□ -1.93
LIMA1-206ENST00000550611 CCNYL1Q8N7R7 359 aa2.98□□□□□ -1.93
LIMA1-206ENST00000550611 SIGLECL1Q8N7X8 197 aa2.98□□□□□ -1.93
LIMA1-206ENST00000550611 ZNF614Q8N883 585 aa2.98□□□□□ -1.93
LIMA1-206ENST00000550611 CLHC1Q8NHS4 586 aa2.98□□□□□ -1.93
LIMA1-206ENST00000550611 ZNF563Q8TA94 476 aa2.98□□□□□ -1.93
LIMA1-206ENST00000550611 MRAPQ8TCY5 172 aa2.98□□□□□ -1.93
LIMA1-206ENST00000550611 ACMSDQ8TDX5 336 aa2.98□□□□□ -1.93
LIMA1-206ENST00000550611 DDIT4LQ96D03 193 aa2.98□□□□□ -1.93
LIMA1-206ENST00000550611 CCDC126Q96EE4 140 aa2.98□□□□□ -1.93
LIMA1-206ENST00000550611 CCT8L2Q96SF2 557 aa2.98□□□□□ -1.93
LIMA1-206ENST00000550611 CITED1Q99966 193 aa2.98□□□□□ -1.93
LIMA1-206ENST00000550611 KCNS3Q9BQ31 491 aa2.98□□□□□ -1.93
LIMA1-206ENST00000550611 ZNF416Q9BWM5 594 aa2.98□□□□□ -1.93
LIMA1-206ENST00000550611 GATA5Q9BWX5 397 aaPredicted RBP2.98□□□□□ -1.93
LIMA1-206ENST00000550611 RSPO3Q9BXY4 272 aaPredicted RBP2.98□□□□□ -1.93
LIMA1-206ENST00000550611 RAB17Q9H0T7 212 aa2.98□□□□□ -1.93
LIMA1-206ENST00000550611 ZNF385DQ9H6B1 395 aa2.98□□□□□ -1.93
LIMA1-206ENST00000550611 NARFLQ9H6Q4 476 aa2.98□□□□□ -1.93
LIMA1-206ENST00000550611 NOX3Q9HBY0 568 aa2.98□□□□□ -1.93
LIMA1-206ENST00000550611 DYNLRB1Q9NP97 96 aa2.98□□□□□ -1.93
LIMA1-206ENST00000550611 POLE3Q9NRF9 147 aa2.98□□□□□ -1.93
LIMA1-206ENST00000550611 PPP1R14DQ9NXH3 145 aa2.98□□□□□ -1.93
LIMA1-206ENST00000550611 NKIRAS2Q9NYR9 191 aa2.98□□□□□ -1.93
LIMA1-206ENST00000550611 MYEF2Q9P2K5 600 aaKnown RBP2.98□□□□□ -1.93
LIMA1-206ENST00000550611 FAF1Q9UNN5 650 aaPredicted RBP2.98□□□□□ -1.93
LIMA1-206ENST00000550611 SLC35A3Q9Y2D2 325 aa2.98□□□□□ -1.93
LIMA1-206ENST00000550611 PPIAL4AQ9Y536 164 aa2.98□□□□□ -1.93
LIMA1-206ENST00000550611 DNAJC15Q9Y5T4 150 aa2.98□□□□□ -1.93
LIMA1-206ENST00000550611 HECTD4Q9Y4D8 3996 aa2.97□□□□□ -1.93
LIMA1-206ENST00000550611 IGLV3-9A0A075B6K5 115 aa2.97□□□□□ -1.93
LIMA1-206ENST00000550611 A0A0A0MQY5 61 aa2.97□□□□□ -1.93
LIMA1-206ENST00000550611 A0A0G2JMP0 313 aa2.97□□□□□ -1.93
LIMA1-206ENST00000550611 A0A0X1KG70 313 aa2.97□□□□□ -1.93
LIMA1-206ENST00000550611 LOC102725191A0A1B0GVB3 256 aa2.97□□□□□ -1.93
LIMA1-206ENST00000550611 FTCDNL1E5RQL4 147 aa2.97□□□□□ -1.93
LIMA1-206ENST00000550611 M0R233 179 aa2.97□□□□□ -1.93
LIMA1-206ENST00000550611 AZIN1O14977 448 aa2.97□□□□□ -1.93
LIMA1-206ENST00000550611 TRAF3IP2O43734 574 aaPredicted RBP2.97□□□□□ -1.93
LIMA1-206ENST00000550611 HNRNPCL1O60812 293 aaKnown RBP2.97□□□□□ -1.93
LIMA1-206ENST00000550611 LYPLA1O75608 230 aaPredicted RBP2.97□□□□□ -1.93
LIMA1-206ENST00000550611 TPPPO94811 219 aa2.97□□□□□ -1.93
LIMA1-206ENST00000550611 GPIP06744 558 aa2.97□□□□□ -1.93
LIMA1-206ENST00000550611 TFPTP0C1Z6 253 aa2.97□□□□□ -1.93
LIMA1-206ENST00000550611 LINC00032P0C843 101 aa2.97□□□□□ -1.93
LIMA1-206ENST00000550611 OR12D1P0DN82 309 aa2.97□□□□□ -1.93
LIMA1-206ENST00000550611 CCNA2P20248 432 aa2.97□□□□□ -1.93
LIMA1-206ENST00000550611 MDKP21741 143 aaPredicted RBP2.97□□□□□ -1.93
LIMA1-206ENST00000550611 RPS4Y1P22090 263 aaKnown RBP2.97□□□□□ -1.93
LIMA1-206ENST00000550611 OMGP23515 440 aa2.97□□□□□ -1.93
LIMA1-206ENST00000550611 RPL3P39023 403 aaKnown RBP2.97□□□□□ -1.93
LIMA1-206ENST00000550611 ACAA2P42765 397 aaKnown RBP2.97□□□□□ -1.93
LIMA1-206ENST00000550611 CRYBB2P43320 205 aa2.97□□□□□ -1.93
LIMA1-206ENST00000550611 MAGEB1P43366 347 aa2.97□□□□□ -1.93
LIMA1-206ENST00000550611 ENTPD1P49961 510 aa2.97□□□□□ -1.93
LIMA1-206ENST00000550611 KRTAP10-3P60369 221 aa2.97□□□□□ -1.93
LIMA1-206ENST00000550611 RPL38P63173 70 aaKnown RBP2.97□□□□□ -1.93
LIMA1-206ENST00000550611 EPS8Q12929 822 aa2.97□□□□□ -1.93
LIMA1-206ENST00000550611 SNTB2Q13425 540 aaKnown RBP2.97□□□□□ -1.93
LIMA1-206ENST00000550611 MAD2L1BPQ15013 274 aaPredicted RBP2.97□□□□□ -1.93
LIMA1-206ENST00000550611 SLC9A3R2Q15599 337 aa2.97□□□□□ -1.93
LIMA1-206ENST00000550611 OR7A5Q15622 319 aa2.97□□□□□ -1.93
LIMA1-206ENST00000550611 MAPK11Q15759 364 aa2.97□□□□□ -1.93
LIMA1-206ENST00000550611 FAM189A2Q15884 450 aa2.97□□□□□ -1.93
LIMA1-206ENST00000550611 GSTA3Q16772 222 aa2.97□□□□□ -1.93
LIMA1-206ENST00000550611 XKR7Q5GH72 579 aa2.97□□□□□ -1.93
LIMA1-206ENST00000550611 PHYHD1Q5SRE7 291 aa2.97□□□□□ -1.93
LIMA1-206ENST00000550611 DCAF12L2Q5VW00 463 aa2.97□□□□□ -1.93
LIMA1-206ENST00000550611 SAXO2Q658L1 398 aa2.97□□□□□ -1.93
LIMA1-206ENST00000550611 REP15Q6BDI9 236 aa2.97□□□□□ -1.93
LIMA1-206ENST00000550611 CLEC6AQ6EIG7 209 aa2.97□□□□□ -1.93
LIMA1-206ENST00000550611 TMEM225Q6GV28 225 aa2.97□□□□□ -1.93
LIMA1-206ENST00000550611 KRT80Q6KB66 452 aa2.97□□□□□ -1.93
LIMA1-206ENST00000550611 MZT2BQ6NZ67 158 aa2.97□□□□□ -1.93
LIMA1-206ENST00000550611 NIPAL3Q6P499 406 aa2.97□□□□□ -1.93
LIMA1-206ENST00000550611 C9orf139Q6ZV77 190 aa2.97□□□□□ -1.93
LIMA1-206ENST00000550611 FAM57BQ71RH2 274 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms